RNA–Protein interactions for RNA: ENST00000530624.5

CTSB-218, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-218ENST00000530624 TLX1P31314 330 aaPredicted RBP13.42□□□□□ -0.26
CTSB-218ENST00000530624 HSD17B3P37058 310 aa13.42□□□□□ -0.26
CTSB-218ENST00000530624 BUD31P41223 144 aaPredicted RBP13.42□□□□□ -0.26
CTSB-218ENST00000530624 NEK2P51955 445 aa13.42□□□□□ -0.26
CTSB-218ENST00000530624 STX4Q12846 297 aa13.42□□□□□ -0.26
CTSB-218ENST00000530624 IFT88Q13099 833 aa13.42□□□□□ -0.26
CTSB-218ENST00000530624 ELOAQ14241 798 aaKnown RBP13.42□□□□□ -0.26
CTSB-218ENST00000530624 OR1C1Q15619 314 aa13.42□□□□□ -0.26
CTSB-218ENST00000530624 EIF2S3LQ2VIR3 472 aaKnown RBP13.42□□□□□ -0.26
CTSB-218ENST00000530624 ZNF678Q5SXM1 525 aa13.42□□□□□ -0.26
CTSB-218ENST00000530624 LETMD1Q6P1Q0 360 aa13.42□□□□□ -0.26
CTSB-218ENST00000530624 MILR1Q7Z6M3 343 aa13.42□□□□□ -0.26
CTSB-218ENST00000530624 CLNKQ7Z7G1 428 aa13.42□□□□□ -0.26
CTSB-218ENST00000530624 NUDT13Q86X67 352 aa13.42□□□□□ -0.26
CTSB-218ENST00000530624 SLC22A9Q8IVM8 553 aa13.42□□□□□ -0.26
CTSB-218ENST00000530624 TMEM178AQ8NBL3 297 aa13.42□□□□□ -0.26
CTSB-218ENST00000530624 OR8K3Q8NH51 312 aa13.42□□□□□ -0.26
CTSB-218ENST00000530624 NCLNQ969V3 563 aa13.42□□□□□ -0.26
CTSB-218ENST00000530624 L3HYPDHQ96EM0 354 aa13.42□□□□□ -0.26
CTSB-218ENST00000530624 ZNF382Q96SR6 550 aa13.42□□□□□ -0.26
CTSB-218ENST00000530624 SORBS1Q9BX66 1292 aaKnown RBP13.42□□□□□ -0.26
CTSB-218ENST00000530624 RPF2Q9H7B2 306 aaKnown RBP13.42□□□□□ -0.26
CTSB-218ENST00000530624 BRF2Q9HAW0 419 aa13.42□□□□□ -0.26
CTSB-218ENST00000530624 PRM3Q9NNZ6 103 aa13.42□□□□□ -0.26
CTSB-218ENST00000530624 LRFN1Q9P244 771 aa13.42□□□□□ -0.26
CTSB-218ENST00000530624 TRPS1Q9UHF7 1281 aa13.42□□□□□ -0.26
CTSB-218ENST00000530624 FBXW2Q9UKT8 454 aa13.42□□□□□ -0.26
CTSB-218ENST00000530624 STK38LQ9Y2H1 464 aa13.42□□□□□ -0.26
CTSB-218ENST00000530624 ATG4BQ9Y4P1 393 aa13.42□□□□□ -0.26
CTSB-218ENST00000530624 CLCA3PQ9Y6N3 262 aa13.42□□□□□ -0.26
CTSB-218ENST00000530624 TRBV11-1A0A0K0K1C0 115 aa13.41□□□□□ -0.26
CTSB-218ENST00000530624 A0A1B0GTL3 188 aa13.41□□□□□ -0.26
CTSB-218ENST00000530624 WIPF3A6NGB9 483 aa13.41□□□□□ -0.26
CTSB-218ENST00000530624 FGF17O60258 216 aa13.41□□□□□ -0.26
CTSB-218ENST00000530624 ZNF500O60304 480 aaPredicted RBP13.41□□□□□ -0.26
CTSB-218ENST00000530624 LDB3O75112 727 aa13.41□□□□□ -0.26
CTSB-218ENST00000530624 GLRA3O75311 464 aa13.41□□□□□ -0.26
CTSB-218ENST00000530624 EEDO75530 441 aaKnown RBP13.41□□□□□ -0.26
CTSB-218ENST00000530624 DDAH2O95865 285 aa13.41□□□□□ -0.26
CTSB-218ENST00000530624 SHBGP04278 402 aa13.41□□□□□ -0.26
CTSB-218ENST00000530624 IFNA16P05015 189 aa13.41□□□□□ -0.26
CTSB-218ENST00000530624 FAM58BPP0C7Q3 252 aa13.41□□□□□ -0.26
CTSB-218ENST00000530624 ARL1P40616 181 aaPredicted RBP13.41□□□□□ -0.26
CTSB-218ENST00000530624 CYB561P49447 251 aa13.41□□□□□ -0.26
CTSB-218ENST00000530624 HLCSP50747 726 aa13.41□□□□□ -0.26
CTSB-218ENST00000530624 PRKAA2P54646 552 aa13.41□□□□□ -0.26
CTSB-218ENST00000530624 HNRNPH2P55795 449 aaKnown RBP13.41□□□□□ -0.26
CTSB-218ENST00000530624 CLCQ05315 142 aa13.41□□□□□ -0.26
CTSB-218ENST00000530624 ESPL1Q14674 2120 aa13.41□□□□□ -0.26
CTSB-218ENST00000530624 UNC50Q53HI1 259 aa13.41□□□□□ -0.26
CTSB-218ENST00000530624 SPINK14Q6IE38 97 aa13.41□□□□□ -0.26
CTSB-218ENST00000530624 ZNF227Q86WZ6 799 aa13.41□□□□□ -0.26
CTSB-218ENST00000530624 UBLCP1Q8WVY7 318 aaPredicted RBP13.41□□□□□ -0.26
CTSB-218ENST00000530624 CCDC126Q96EE4 140 aa13.41□□□□□ -0.26
CTSB-218ENST00000530624 PSMG3-AS1Q96PY0 264 aa13.41□□□□□ -0.26
CTSB-218ENST00000530624 TMEM237Q96Q45 408 aa13.41□□□□□ -0.26
CTSB-218ENST00000530624 ELOVL6Q9H5J4 265 aa13.41□□□□□ -0.26
CTSB-218ENST00000530624 RYDENQ9NUL5 291 aaKnown RBP13.41□□□□□ -0.26
CTSB-218ENST00000530624 AHSPQ9NZD4 102 aa13.41□□□□□ -0.26
CTSB-218ENST00000530624 TBK1Q9UHD2 729 aa13.41□□□□□ -0.26
CTSB-218ENST00000530624 ZNF225Q9UK10 706 aa13.41□□□□□ -0.26
CTSB-218ENST00000530624 SNX6Q9UNH7 406 aa13.41□□□□□ -0.26
CTSB-218ENST00000530624 USP9YO00507 2555 aaPredicted RBP13.4□□□□□ -0.26
CTSB-218ENST00000530624 POLEQ07864 2286 aa13.4□□□□□ -0.26
CTSB-218ENST00000530624 TMEM200CA6NKL6 621 aa13.4□□□□□ -0.26
CTSB-218ENST00000530624 GOLGA8RI6L899 631 aa13.4□□□□□ -0.26
CTSB-218ENST00000530624 PPP6CO00743 305 aa13.4□□□□□ -0.26
CTSB-218ENST00000530624 TMPRSS11DO60235 418 aa13.4□□□□□ -0.26
CTSB-218ENST00000530624 CDH16O75309 829 aa13.4□□□□□ -0.26
CTSB-218ENST00000530624 SEMA7AO75326 666 aa13.4□□□□□ -0.26
CTSB-218ENST00000530624 SUPT7LO94864 414 aa13.4□□□□□ -0.26
CTSB-218ENST00000530624 AGFG2O95081 481 aa13.4□□□□□ -0.26
CTSB-218ENST00000530624 MLYCDO95822 493 aa13.4□□□□□ -0.26
CTSB-218ENST00000530624 SP1P08047 785 aa13.4□□□□□ -0.26
CTSB-218ENST00000530624 HSD3B1P14060 373 aa13.4□□□□□ -0.26
CTSB-218ENST00000530624 HSD3B2P26439 372 aa13.4□□□□□ -0.26
CTSB-218ENST00000530624 GALNSP34059 522 aa13.4□□□□□ -0.26
CTSB-218ENST00000530624 STT3AP46977 705 aa13.4□□□□□ -0.26
CTSB-218ENST00000530624 CDH13P55290 713 aa13.4□□□□□ -0.26
CTSB-218ENST00000530624 NAA20P61599 178 aa13.4□□□□□ -0.26
CTSB-218ENST00000530624 OC90Q02509 493 aaPredicted RBP13.4□□□□□ -0.26
CTSB-218ENST00000530624 ZNF468Q5VIY5 522 aaPredicted RBP13.4□□□□□ -0.26
CTSB-218ENST00000530624 TTC19Q6DKK2 380 aaPredicted RBP13.4□□□□□ -0.26
CTSB-218ENST00000530624 SLC25A25Q6KCM7 469 aa13.4□□□□□ -0.26
CTSB-218ENST00000530624 CYP20A1Q6UW02 462 aa13.4□□□□□ -0.26
CTSB-218ENST00000530624 HSDL2Q6YN16 418 aa13.4□□□□□ -0.26
CTSB-218ENST00000530624 RPS27LQ71UM5 84 aaKnown RBP13.4□□□□□ -0.26
CTSB-218ENST00000530624 PAGE2Q7Z2X7 111 aa13.4□□□□□ -0.26
CTSB-218ENST00000530624 GPALPP1Q8IXQ4 340 aa13.4□□□□□ -0.26
CTSB-218ENST00000530624 METTL4Q8N3J2 472 aa13.4□□□□□ -0.26
CTSB-218ENST00000530624 PRR7Q8TB68 274 aa13.4□□□□□ -0.26
CTSB-218ENST00000530624 TRPC4APQ8TEL6 797 aa13.4□□□□□ -0.26
CTSB-218ENST00000530624 SSC4DQ8WTU2 575 aa13.4□□□□□ -0.26
CTSB-218ENST00000530624 C5orf34Q96MH7 638 aa13.4□□□□□ -0.26
CTSB-218ENST00000530624 PELOQ9BRX2 385 aaKnown RBP13.4□□□□□ -0.26
CTSB-218ENST00000530624 ANKRD10Q9NXR5 420 aa13.4□□□□□ -0.26
CTSB-218ENST00000530624 MYOTQ9UBF9 498 aa13.4□□□□□ -0.26
CTSB-218ENST00000530624 EMCNQ9ULC0 261 aa13.4□□□□□ -0.26
CTSB-218ENST00000530624 YARS2Q9Y2Z4 477 aaKnown RBP13.4□□□□□ -0.26
CTSB-218ENST00000530624 A0A1W2PPM1 405 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms