RNA–Protein interactions for RNA: ENST00000529506.5

CMTM1-213, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-213ENST00000529506 ZNF223Q9UK11 482 aaPredicted RBP16.5■□□□□ 0.23
CMTM1-213ENST00000529506 PKDREJQ9NTG1 2253 aa16.49■□□□□ 0.23
CMTM1-213ENST00000529506 LDB3O75112 727 aa16.49■□□□□ 0.23
CMTM1-213ENST00000529506 CLDN14O95500 239 aa16.49■□□□□ 0.23
CMTM1-213ENST00000529506 PTGER4P35408 488 aa16.49■□□□□ 0.23
CMTM1-213ENST00000529506 SLC7A5Q01650 507 aa16.49■□□□□ 0.23
CMTM1-213ENST00000529506 SLAMF1Q13291 335 aa16.49■□□□□ 0.23
CMTM1-213ENST00000529506 SETDB1Q15047 1291 aa16.49■□□□□ 0.23
CMTM1-213ENST00000529506 UAP1Q16222 522 aaPredicted RBP16.49■□□□□ 0.23
CMTM1-213ENST00000529506 PFKFB4Q16877 469 aa16.49■□□□□ 0.23
CMTM1-213ENST00000529506 RNFT1Q5M7Z0 435 aa16.49■□□□□ 0.23
CMTM1-213ENST00000529506 TMEM211Q6ICI0 200 aa16.49■□□□□ 0.23
CMTM1-213ENST00000529506 ADNP2Q6IQ32 1131 aa16.49■□□□□ 0.23
CMTM1-213ENST00000529506 OPN5Q6U736 354 aa16.49■□□□□ 0.23
CMTM1-213ENST00000529506 IL20RBQ6UXL0 311 aa16.49■□□□□ 0.23
CMTM1-213ENST00000529506 DOLPP1Q86YN1 238 aa16.49■□□□□ 0.23
CMTM1-213ENST00000529506 MYLK4Q86YV6 388 aaPredicted RBP16.49■□□□□ 0.23
CMTM1-213ENST00000529506 AGAP11Q8TF27 550 aa16.49■□□□□ 0.23
CMTM1-213ENST00000529506 KCTD4Q8WVF5 259 aa16.49■□□□□ 0.23
CMTM1-213ENST00000529506 MRRFQ96E11 262 aaKnown RBP16.49■□□□□ 0.23
CMTM1-213ENST00000529506 CSF3RQ99062 836 aa16.49■□□□□ 0.23
CMTM1-213ENST00000529506 RPF2Q9H7B2 306 aaKnown RBP16.49■□□□□ 0.23
CMTM1-213ENST00000529506 SNX15Q9NRS6 342 aa16.49■□□□□ 0.23
CMTM1-213ENST00000529506 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.49■□□□□ 0.23
CMTM1-213ENST00000529506 COQ3Q9NZJ6 369 aa16.49■□□□□ 0.23
CMTM1-213ENST00000529506 TMCO1Q9UM00 188 aa16.49■□□□□ 0.23
CMTM1-213ENST00000529506 IKBKGQ9Y6K9 419 aa16.49■□□□□ 0.23
CMTM1-213ENST00000529506 A0A096LPK6 155 aa16.48■□□□□ 0.23
CMTM1-213ENST00000529506 ACOT7O00154 380 aa16.48■□□□□ 0.23
CMTM1-213ENST00000529506 RBP1P09455 135 aa16.48■□□□□ 0.23
CMTM1-213ENST00000529506 MTHFD2P13995 350 aa16.48■□□□□ 0.23
CMTM1-213ENST00000529506 COX6B1P14854 86 aa16.48■□□□□ 0.23
CMTM1-213ENST00000529506 BUD31P41223 144 aaPredicted RBP16.48■□□□□ 0.23
CMTM1-213ENST00000529506 SERPINB8P50452 374 aa16.48■□□□□ 0.23
CMTM1-213ENST00000529506 RNF4P78317 190 aa16.48■□□□□ 0.23
CMTM1-213ENST00000529506 ADORA2A-AS1P86434 159 aa16.48■□□□□ 0.23
CMTM1-213ENST00000529506 TBL3Q12788 808 aaKnown RBP16.48■□□□□ 0.23
CMTM1-213ENST00000529506 DDX39BQ13838 428 aaKnown RBP16.48■□□□□ 0.23
CMTM1-213ENST00000529506 PCBP2Q15366 365 aaKnown RBP eCLIP16.48■□□□□ 0.239e-7■■■■□ 24.1
CMTM1-213ENST00000529506 WHAMMP3Q1A5X7 153 aa16.48■□□□□ 0.23
CMTM1-213ENST00000529506 ARHGAP11AQ6P4F7 1023 aa16.48■□□□□ 0.23
CMTM1-213ENST00000529506 ZNF793Q6ZN11 406 aa16.48■□□□□ 0.23
CMTM1-213ENST00000529506 TAOK1Q7L7X3 1001 aa16.48■□□□□ 0.23
CMTM1-213ENST00000529506 MDGA2Q7Z553 956 aa16.48■□□□□ 0.23
CMTM1-213ENST00000529506 GPR180Q86V85 440 aa16.48■□□□□ 0.23
CMTM1-213ENST00000529506 RELL1Q8IUW5 271 aa16.48■□□□□ 0.23
CMTM1-213ENST00000529506 MCEMP1Q8IX19 187 aa16.48■□□□□ 0.23
CMTM1-213ENST00000529506 ZCCHC7Q8N3Z6 543 aaKnown RBP16.48■□□□□ 0.23
CMTM1-213ENST00000529506 PSD4Q8NDX1 1056 aa16.48■□□□□ 0.23
CMTM1-213ENST00000529506 HUS1BQ8NHY5 278 aa16.48■□□□□ 0.23
CMTM1-213ENST00000529506 SLC2A12Q8TD20 617 aa16.48■□□□□ 0.23
CMTM1-213ENST00000529506 MTFMTQ96DP5 389 aaKnown RBP16.48■□□□□ 0.23
CMTM1-213ENST00000529506 DGAT2Q96PD7 388 aa16.48■□□□□ 0.23
CMTM1-213ENST00000529506 RASL10BQ96S79 203 aa16.48■□□□□ 0.23
CMTM1-213ENST00000529506 PELOQ9BRX2 385 aaKnown RBP16.48■□□□□ 0.23
CMTM1-213ENST00000529506 LRRC1Q9BTT6 524 aa16.48■□□□□ 0.23
CMTM1-213ENST00000529506 OR51B5Q9H339 312 aa16.48■□□□□ 0.23
CMTM1-213ENST00000529506 ZDHHC18Q9NUE0 388 aa16.48■□□□□ 0.23
CMTM1-213ENST00000529506 ASB1Q9Y576 335 aa16.48■□□□□ 0.23
CMTM1-213ENST00000529506 NCOA6Q14686 2063 aaPredicted RBP16.47■□□□□ 0.23
CMTM1-213ENST00000529506 H0YIV9 168 aa16.47■□□□□ 0.23
CMTM1-213ENST00000529506 WWP2O00308 870 aa16.47■□□□□ 0.23
CMTM1-213ENST00000529506 RTCAO00442 366 aaKnown RBP16.47■□□□□ 0.23
CMTM1-213ENST00000529506 HS6ST1O60243 411 aa16.47■□□□□ 0.23
CMTM1-213ENST00000529506 KLK8O60259 260 aa16.47■□□□□ 0.23
CMTM1-213ENST00000529506 SH3BGRLO75368 114 aa16.47■□□□□ 0.23
CMTM1-213ENST00000529506 URI1O94763 535 aaPredicted RBP16.47■□□□□ 0.23
CMTM1-213ENST00000529506 CNR1P21554 472 aa16.47■□□□□ 0.23
CMTM1-213ENST00000529506 STT3AP46977 705 aa16.47■□□□□ 0.23
CMTM1-213ENST00000529506 HK2P52789 917 aa16.47■□□□□ 0.23
CMTM1-213ENST00000529506 PLGLB1Q02325 96 aa16.47■□□□□ 0.23
CMTM1-213ENST00000529506 GTF2H2Q13888 395 aa16.47■□□□□ 0.23
CMTM1-213ENST00000529506 MPEG1Q2M385 716 aa16.47■□□□□ 0.23
CMTM1-213ENST00000529506 NDUFAF5Q5TEU4 345 aa16.47■□□□□ 0.23
CMTM1-213ENST00000529506 GTF2H2CQ6P1K8 395 aa16.47■□□□□ 0.23
CMTM1-213ENST00000529506 RTL4Q6ZR62 310 aa16.47■□□□□ 0.23
CMTM1-213ENST00000529506 GK5Q6ZS86 529 aa16.47■□□□□ 0.23
CMTM1-213ENST00000529506 SLC22A16Q86VW1 577 aa16.47■□□□□ 0.23
CMTM1-213ENST00000529506 SRRM1Q8IYB3 904 aaKnown RBP16.47■□□□□ 0.23
CMTM1-213ENST00000529506 CENPLQ8N0S6 344 aaPredicted RBP16.47■□□□□ 0.23
CMTM1-213ENST00000529506 C17orf53Q8N3J3 647 aaPredicted RBP16.47■□□□□ 0.23
CMTM1-213ENST00000529506 GOLM1Q8NBJ4 401 aa16.47■□□□□ 0.23
CMTM1-213ENST00000529506 MNS1Q8NEH6 495 aa16.47■□□□□ 0.23
CMTM1-213ENST00000529506 FAM57AQ8TBR7 257 aa16.47■□□□□ 0.23
CMTM1-213ENST00000529506 ATP6V1E2Q96A05 226 aa16.47■□□□□ 0.23
CMTM1-213ENST00000529506 ANKRD9Q96BM1 317 aaPredicted RBP16.47■□□□□ 0.23
CMTM1-213ENST00000529506 PHF12Q96QT6 1004 aa16.47■□□□□ 0.23
CMTM1-213ENST00000529506 ACSS3Q9H6R3 686 aa16.47■□□□□ 0.23
CMTM1-213ENST00000529506 IPPKQ9H8X2 491 aa16.47■□□□□ 0.23
CMTM1-213ENST00000529506 WDR41Q9HAD4 459 aa16.47■□□□□ 0.23
CMTM1-213ENST00000529506 LYARQ9NX58 379 aaKnown RBP16.47■□□□□ 0.23
CMTM1-213ENST00000529506 A0A1B0GTH9 108 aa16.46■□□□□ 0.23
CMTM1-213ENST00000529506 ESYT3A0FGR9 886 aa16.46■□□□□ 0.23
CMTM1-213ENST00000529506 TMEM200CA6NKL6 621 aa16.46■□□□□ 0.23
CMTM1-213ENST00000529506 FOXE1O00358 373 aaPredicted RBP16.46■□□□□ 0.23
CMTM1-213ENST00000529506 PRKNO60260 465 aaPredicted RBP16.46■□□□□ 0.23
CMTM1-213ENST00000529506 CDC40O60508 579 aaKnown RBP eCLIP16.46■□□□□ 0.23
CMTM1-213ENST00000529506 TPOP07202 933 aa16.46■□□□□ 0.23
CMTM1-213ENST00000529506 INHBAP08476 426 aa16.46■□□□□ 0.23
CMTM1-213ENST00000529506 GMPRP36959 345 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms