RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 ZNF592Q92610 1267 aa21.54■■□□□ 1.04
PKP3-206ENST00000528036 ART5Q96L15 291 aa21.54■■□□□ 1.04
PKP3-206ENST00000528036 GPR78Q96P69 363 aa21.54■■□□□ 1.04
PKP3-206ENST00000528036 MAPKAP1Q9BPZ7 522 aa21.54■■□□□ 1.04
PKP3-206ENST00000528036 CDC42EP4Q9H3Q1 356 aaKnown RBP21.54■■□□□ 1.04
PKP3-206ENST00000528036 IPPKQ9H8X2 491 aa21.54■■□□□ 1.04
PKP3-206ENST00000528036 DMRT3Q9NQL9 472 aa21.54■■□□□ 1.04
PKP3-206ENST00000528036 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.54■■□□□ 1.04
PKP3-206ENST00000528036 ERVK-11Q9UQG0 969 aa21.54■■□□□ 1.04
PKP3-206ENST00000528036 A8MVJ9 347 aa21.53■■□□□ 1.04
PKP3-206ENST00000528036 TGFBR3LH3BV60 316 aa21.53■■□□□ 1.04
PKP3-206ENST00000528036 HNRNPRO43390 633 aaKnown RBP21.53■■□□□ 1.04
PKP3-206ENST00000528036 BUD31P41223 144 aaPredicted RBP21.53■■□□□ 1.04
PKP3-206ENST00000528036 IRF9Q00978 393 aa21.53■■□□□ 1.04
PKP3-206ENST00000528036 SLAMF1Q13291 335 aa21.53■■□□□ 1.04
PKP3-206ENST00000528036 GPR180Q86V85 440 aa21.53■■□□□ 1.04
PKP3-206ENST00000528036 ZNF227Q86WZ6 799 aa21.53■■□□□ 1.04
PKP3-206ENST00000528036 PTPMT1Q8WUK0 201 aaPredicted RBP21.53■■□□□ 1.04
PKP3-206ENST00000528036 ASB15Q8WXK1 588 aa21.53■■□□□ 1.04
PKP3-206ENST00000528036 IFT81Q8WYA0 676 aa21.53■■□□□ 1.04
PKP3-206ENST00000528036 RBM18Q96H35 190 aaKnown RBP21.53■■□□□ 1.04
PKP3-206ENST00000528036 SGCZQ96LD1 299 aa21.53■■□□□ 1.04
PKP3-206ENST00000528036 OR51B5Q9H339 312 aa21.53■■□□□ 1.04
PKP3-206ENST00000528036 RPF2Q9H7B2 306 aaKnown RBP21.53■■□□□ 1.04
PKP3-206ENST00000528036 CHST11Q9NPF2 352 aa21.53■■□□□ 1.04
PKP3-206ENST00000528036 HPF1Q9NWY4 346 aa21.53■■□□□ 1.04
PKP3-206ENST00000528036 LYARQ9NX58 379 aaKnown RBP21.53■■□□□ 1.04
PKP3-206ENST00000528036 CPSF2Q9P2I0 782 aaKnown RBP21.53■■□□□ 1.04
PKP3-206ENST00000528036 ZNF223Q9UK11 482 aaPredicted RBP21.53■■□□□ 1.04
PKP3-206ENST00000528036 UTP20O75691 2785 aaKnown RBP21.52■■□□□ 1.04
PKP3-206ENST00000528036 C17orf105B2RV13 164 aa21.52■■□□□ 1.04
PKP3-206ENST00000528036 STX16-NPEPL1H3BU86 382 aa21.52■■□□□ 1.04
PKP3-206ENST00000528036 STX16O14662 325 aa21.52■■□□□ 1.04
PKP3-206ENST00000528036 PEX1O43933 1283 aa21.52■■□□□ 1.04
PKP3-206ENST00000528036 SMIM24O75264 130 aa21.52■■□□□ 1.04
PKP3-206ENST00000528036 CLDN9O95484 217 aa21.52■■□□□ 1.04
PKP3-206ENST00000528036 ACSL3O95573 720 aa21.52■■□□□ 1.04
PKP3-206ENST00000528036 GMPRP36959 345 aa21.52■■□□□ 1.04
PKP3-206ENST00000528036 MAGEA12P43365 314 aa21.52■■□□□ 1.04
PKP3-206ENST00000528036 IGLV3-21P80748 117 aaPredicted RBP21.52■■□□□ 1.04
PKP3-206ENST00000528036 DDX39BQ13838 428 aaKnown RBP21.52■■□□□ 1.04
PKP3-206ENST00000528036 TECRLQ5HYJ1 363 aa21.52■■□□□ 1.04
PKP3-206ENST00000528036 RGS9BPQ6ZS82 235 aa21.52■■□□□ 1.04
PKP3-206ENST00000528036 MRGPRGQ86SM5 289 aa21.52■■□□□ 1.04
PKP3-206ENST00000528036 C16orf52Q8NHV5 167 aa21.52■■□□□ 1.04
PKP3-206ENST00000528036 ATP6V1E2Q96A05 226 aa21.52■■□□□ 1.04
PKP3-206ENST00000528036 CCDC120Q96HB5 630 aa21.52■■□□□ 1.04
PKP3-206ENST00000528036 DGAT2Q96PD7 388 aa21.52■■□□□ 1.04
PKP3-206ENST00000528036 WDR41Q9HAD4 459 aa21.52■■□□□ 1.04
PKP3-206ENST00000528036 DMGDHQ9UI17 866 aaKnown RBP21.52■■□□□ 1.04
PKP3-206ENST00000528036 A0A087WUV0 522 aaPredicted RBP21.51■■□□□ 1.03
PKP3-206ENST00000528036 RTCAO00442 366 aaKnown RBP21.51■■□□□ 1.03
PKP3-206ENST00000528036 PRRG2O14669 202 aa21.51■■□□□ 1.03
PKP3-206ENST00000528036 TFECO14948 347 aaPredicted RBP21.51■■□□□ 1.03
PKP3-206ENST00000528036 ABOP16442 354 aa21.51■■□□□ 1.03
PKP3-206ENST00000528036 STT3AP46977 705 aa21.51■■□□□ 1.03
PKP3-206ENST00000528036 MEOX1P50221 254 aa21.51■■□□□ 1.03
PKP3-206ENST00000528036 PLIN5Q00G26 463 aa21.51■■□□□ 1.03
PKP3-206ENST00000528036 TBL3Q12788 808 aaKnown RBP21.51■■□□□ 1.03
PKP3-206ENST00000528036 PAOXQ6QHF9 649 aa21.51■■□□□ 1.03
PKP3-206ENST00000528036 OPN5Q6U736 354 aa21.51■■□□□ 1.03
PKP3-206ENST00000528036 GOLGA7Q7Z5G4 137 aa21.51■■□□□ 1.03
PKP3-206ENST00000528036 SULF2Q8IWU5 870 aa21.51■■□□□ 1.03
PKP3-206ENST00000528036 CPSF7Q8N684 471 aaKnown RBP21.51■■□□□ 1.03
PKP3-206ENST00000528036 ZFP62Q8NB50 900 aaPredicted RBP21.51■■□□□ 1.03
PKP3-206ENST00000528036 ITLN2Q8WWU7 325 aaPredicted RBP21.51■■□□□ 1.03
PKP3-206ENST00000528036 PAFAH2Q99487 392 aa21.51■■□□□ 1.03
PKP3-206ENST00000528036 MTERF1Q99551 399 aaKnown RBP21.51■■□□□ 1.03
PKP3-206ENST00000528036 SERPINI1Q99574 410 aa21.51■■□□□ 1.03
PKP3-206ENST00000528036 OR8D2Q9GZM6 311 aa21.51■■□□□ 1.03
PKP3-206ENST00000528036 PRSS44E7EML9 344 aa21.5■■□□□ 1.03
PKP3-206ENST00000528036 PLPP1O14494 284 aa21.5■■□□□ 1.03
PKP3-206ENST00000528036 LDB3O75112 727 aa21.5■■□□□ 1.03
PKP3-206ENST00000528036 OR2J2O76002 312 aa21.5■■□□□ 1.03
PKP3-206ENST00000528036 SEMA3DO95025 777 aa21.5■■□□□ 1.03
PKP3-206ENST00000528036 COL8A1P27658 744 aa21.5■■□□□ 1.03
PKP3-206ENST00000528036 TNFRSF17Q02223 184 aa21.5■■□□□ 1.03
PKP3-206ENST00000528036 C3AR1Q16581 482 aa21.5■■□□□ 1.03
PKP3-206ENST00000528036 CPSF6Q16630 551 aaKnown RBP eCLIP21.5■■□□□ 1.03
PKP3-206ENST00000528036 MPEG1Q2M385 716 aa21.5■■□□□ 1.03
PKP3-206ENST00000528036 ZNF787Q6DD87 383 aa21.5■■□□□ 1.03
PKP3-206ENST00000528036 CEP112Q8N8E3 955 aa21.5■■□□□ 1.03
PKP3-206ENST00000528036 GOLM1Q8NBJ4 401 aa21.5■■□□□ 1.03
PKP3-206ENST00000528036 KIF18AQ8NI77 898 aa21.5■■□□□ 1.03
PKP3-206ENST00000528036 NUBPLQ8TB37 319 aa21.5■■□□□ 1.03
PKP3-206ENST00000528036 SLC2A12Q8TD20 617 aa21.5■■□□□ 1.03
PKP3-206ENST00000528036 ANKRD9Q96BM1 317 aaPredicted RBP21.5■■□□□ 1.03
PKP3-206ENST00000528036 MRPL57Q9BQC6 102 aaKnown RBP21.5■■□□□ 1.03
PKP3-206ENST00000528036 NTMT1Q9BV86 223 aa21.5■■□□□ 1.03
PKP3-206ENST00000528036 DDX31Q9H8H2 851 aaKnown RBP21.5■■□□□ 1.03
PKP3-206ENST00000528036 AHSPQ9NZD4 102 aa21.5■■□□□ 1.03
PKP3-206ENST00000528036 GALNSP34059 522 aa21.49■■□□□ 1.03
PKP3-206ENST00000528036 CCNG1P51959 295 aa21.49■■□□□ 1.03
PKP3-206ENST00000528036 RPS13P62277 151 aaKnown RBP21.49■■□□□ 1.03
PKP3-206ENST00000528036 RNF4P78317 190 aa21.49■■□□□ 1.03
PKP3-206ENST00000528036 SP5Q6BEB4 398 aaPredicted RBP21.49■■□□□ 1.03
PKP3-206ENST00000528036 CYP20A1Q6UW02 462 aa21.49■■□□□ 1.03
PKP3-206ENST00000528036 RTL4Q6ZR62 310 aa21.49■■□□□ 1.03
PKP3-206ENST00000528036 LCA5Q86VQ0 697 aa21.49■■□□□ 1.03
PKP3-206ENST00000528036 DND1Q8IYX4 353 aaKnown RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms