RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 TEX9Q8N6V9 391 aa12.47□□□□□ -0.41
CAPN1-207ENST00000527189 PTPMT1Q8WUK0 201 aaPredicted RBP12.47□□□□□ -0.41
CAPN1-207ENST00000527189 KCTD4Q8WVF5 259 aa12.47□□□□□ -0.41
CAPN1-207ENST00000527189 RGMAQ96B86 450 aa12.47□□□□□ -0.41
CAPN1-207ENST00000527189 REPS1Q96D71 796 aa12.47□□□□□ -0.41
CAPN1-207ENST00000527189 CSF3RQ99062 836 aa12.47□□□□□ -0.41
CAPN1-207ENST00000527189 MAPKAP1Q9BPZ7 522 aa12.47□□□□□ -0.41
CAPN1-207ENST00000527189 CHST11Q9NPF2 352 aa12.47□□□□□ -0.41
CAPN1-207ENST00000527189 TIMMDC1Q9NPL8 285 aa12.47□□□□□ -0.41
CAPN1-207ENST00000527189 MYOTQ9UBF9 498 aa12.47□□□□□ -0.41
CAPN1-207ENST00000527189 CROCCQ5TZA2 2017 aa12.47□□□□□ -0.41
CAPN1-207ENST00000527189 TMEM200CA6NKL6 621 aa12.46□□□□□ -0.41
CAPN1-207ENST00000527189 PRSS44E7EML9 344 aa12.46□□□□□ -0.41
CAPN1-207ENST00000527189 H0YIV9 168 aa12.46□□□□□ -0.41
CAPN1-207ENST00000527189 PEX1O43933 1283 aa12.46□□□□□ -0.41
CAPN1-207ENST00000527189 GFAPP14136 432 aa12.46□□□□□ -0.41
CAPN1-207ENST00000527189 TNNI3P19429 210 aa12.46□□□□□ -0.41
CAPN1-207ENST00000527189 CPN2P22792 545 aa12.46□□□□□ -0.41
CAPN1-207ENST00000527189 PPP2R1BP30154 601 aa12.46□□□□□ -0.41
CAPN1-207ENST00000527189 TLX1P31314 330 aaPredicted RBP12.46□□□□□ -0.41
CAPN1-207ENST00000527189 GMPRP36959 345 aa12.46□□□□□ -0.41
CAPN1-207ENST00000527189 SSR2P43308 183 aa12.46□□□□□ -0.41
CAPN1-207ENST00000527189 SERPINB8P50452 374 aa12.46□□□□□ -0.41
CAPN1-207ENST00000527189 SMSP52788 366 aa12.46□□□□□ -0.41
CAPN1-207ENST00000527189 PHEXP78562 749 aa12.46□□□□□ -0.41
CAPN1-207ENST00000527189 C3AR1Q16581 482 aa12.46□□□□□ -0.41
CAPN1-207ENST00000527189 PFKFB4Q16877 469 aa12.46□□□□□ -0.41
CAPN1-207ENST00000527189 GLE1Q53GS7 698 aaKnown RBP12.46□□□□□ -0.41
CAPN1-207ENST00000527189 CLNKQ7Z7G1 428 aa12.46□□□□□ -0.41
CAPN1-207ENST00000527189 ZCCHC7Q8N3Z6 543 aaKnown RBP12.46□□□□□ -0.41
CAPN1-207ENST00000527189 CPSF7Q8N684 471 aaKnown RBP12.46□□□□□ -0.41
CAPN1-207ENST00000527189 ZFP62Q8NB50 900 aaPredicted RBP12.46□□□□□ -0.41
CAPN1-207ENST00000527189 OR5L2Q8NGL0 311 aa12.46□□□□□ -0.41
CAPN1-207ENST00000527189 HUS1BQ8NHY5 278 aa12.46□□□□□ -0.41
CAPN1-207ENST00000527189 TANKQ92844 425 aa12.46□□□□□ -0.41
CAPN1-207ENST00000527189 GPR78Q96P69 363 aa12.46□□□□□ -0.41
CAPN1-207ENST00000527189 ACTR8Q9H981 624 aa12.46□□□□□ -0.41
CAPN1-207ENST00000527189 PRM3Q9NNZ6 103 aa12.46□□□□□ -0.41
CAPN1-207ENST00000527189 TMCO1Q9UM00 188 aa12.46□□□□□ -0.41
CAPN1-207ENST00000527189 PPT2Q9UMR5 302 aa12.46□□□□□ -0.41
CAPN1-207ENST00000527189 A8MVJ9 347 aa12.45□□□□□ -0.42
CAPN1-207ENST00000527189 C17orf105B2RV13 164 aa12.45□□□□□ -0.42
CAPN1-207ENST00000527189 FOXE1O00358 373 aaPredicted RBP12.45□□□□□ -0.42
CAPN1-207ENST00000527189 DYNC1I1O14576 645 aa12.45□□□□□ -0.42
CAPN1-207ENST00000527189 PRRG2O14669 202 aa12.45□□□□□ -0.42
CAPN1-207ENST00000527189 DYRK3O43781 588 aa12.45□□□□□ -0.42
CAPN1-207ENST00000527189 SLU7O95391 586 aaKnown RBP12.45□□□□□ -0.42
CAPN1-207ENST00000527189 ALDOAP04075 364 aaKnown RBP12.45□□□□□ -0.42
CAPN1-207ENST00000527189 RBP1P09455 135 aa12.45□□□□□ -0.42
CAPN1-207ENST00000527189 COL6A2P12110 1019 aa12.45□□□□□ -0.42
CAPN1-207ENST00000527189 COX7A2P14406 83 aa12.45□□□□□ -0.42
CAPN1-207ENST00000527189 ABOP16442 354 aa12.45□□□□□ -0.42
CAPN1-207ENST00000527189 MEOX1P50221 254 aa12.45□□□□□ -0.42
CAPN1-207ENST00000527189 SERPINB9P50453 376 aa12.45□□□□□ -0.42
CAPN1-207ENST00000527189 IGLV3-21P80748 117 aaPredicted RBP12.45□□□□□ -0.42
CAPN1-207ENST00000527189 IRF9Q00978 393 aa12.45□□□□□ -0.42
CAPN1-207ENST00000527189 SLAMF1Q13291 335 aa12.45□□□□□ -0.42
CAPN1-207ENST00000527189 CUL3Q13618 768 aa12.45□□□□□ -0.42
CAPN1-207ENST00000527189 UAP1Q16222 522 aaPredicted RBP12.45□□□□□ -0.42
CAPN1-207ENST00000527189 RNFT1Q5M7Z0 435 aa12.45□□□□□ -0.42
CAPN1-207ENST00000527189 C10orf62Q5T681 223 aaPredicted RBP12.45□□□□□ -0.42
CAPN1-207ENST00000527189 RGS9BPQ6ZS82 235 aa12.45□□□□□ -0.42
CAPN1-207ENST00000527189 GPR180Q86V85 440 aa12.45□□□□□ -0.42
CAPN1-207ENST00000527189 L3MBTL4Q8NA19 623 aa12.45□□□□□ -0.42
CAPN1-207ENST00000527189 SLC44A1Q8WWI5 657 aa12.45□□□□□ -0.42
CAPN1-207ENST00000527189 ISL2Q96A47 359 aa12.45□□□□□ -0.42
CAPN1-207ENST00000527189 ANKRD9Q96BM1 317 aaPredicted RBP12.45□□□□□ -0.42
CAPN1-207ENST00000527189 MRRFQ96E11 262 aaKnown RBP12.45□□□□□ -0.42
CAPN1-207ENST00000527189 RBM18Q96H35 190 aaKnown RBP12.45□□□□□ -0.42
CAPN1-207ENST00000527189 SGCZQ96LD1 299 aa12.45□□□□□ -0.42
CAPN1-207ENST00000527189 TSPAN10Q9H1Z9 355 aaPredicted RBP12.45□□□□□ -0.42
CAPN1-207ENST00000527189 OR51B5Q9H339 312 aa12.45□□□□□ -0.42
CAPN1-207ENST00000527189 RPF2Q9H7B2 306 aaKnown RBP12.45□□□□□ -0.42
CAPN1-207ENST00000527189 IPPKQ9H8X2 491 aa12.45□□□□□ -0.42
CAPN1-207ENST00000527189 DMRT3Q9NQL9 472 aa12.45□□□□□ -0.42
CAPN1-207ENST00000527189 HPF1Q9NWY4 346 aa12.45□□□□□ -0.42
CAPN1-207ENST00000527189 NINJ2Q9NZG7 142 aa12.45□□□□□ -0.42
CAPN1-207ENST00000527189 PHF11Q9UIL8 331 aa12.45□□□□□ -0.42
CAPN1-207ENST00000527189 TINAGQ9UJW2 476 aa12.45□□□□□ -0.42
CAPN1-207ENST00000527189 ERVK-11Q9UQG0 969 aa12.45□□□□□ -0.42
CAPN1-207ENST00000527189 MEMO1Q9Y316 297 aa12.45□□□□□ -0.42
CAPN1-207ENST00000527189 IKBKGQ9Y6K9 419 aa12.45□□□□□ -0.42
CAPN1-207ENST00000527189 FBN3Q75N90 2809 aa12.44□□□□□ -0.42
CAPN1-207ENST00000527189 E9PLN8 166 aa12.44□□□□□ -0.42
CAPN1-207ENST00000527189 RTCAO00442 366 aaKnown RBP12.44□□□□□ -0.42
CAPN1-207ENST00000527189 TFECO14948 347 aaPredicted RBP12.44□□□□□ -0.42
CAPN1-207ENST00000527189 PRKNO60260 465 aaPredicted RBP12.44□□□□□ -0.42
CAPN1-207ENST00000527189 LDB3O75112 727 aa12.44□□□□□ -0.42
CAPN1-207ENST00000527189 OR2J2O76002 312 aa12.44□□□□□ -0.42
CAPN1-207ENST00000527189 INHBAP08476 426 aa12.44□□□□□ -0.42
CAPN1-207ENST00000527189 CNTFP26441 200 aa12.44□□□□□ -0.42
CAPN1-207ENST00000527189 TNFRSF8P28908 595 aa12.44□□□□□ -0.42
CAPN1-207ENST00000527189 BUD31P41223 144 aaPredicted RBP12.44□□□□□ -0.42
CAPN1-207ENST00000527189 MAGEA12P43365 314 aa12.44□□□□□ -0.42
CAPN1-207ENST00000527189 STT3AP46977 705 aa12.44□□□□□ -0.42
CAPN1-207ENST00000527189 RAP1GDS1P52306 607 aa12.44□□□□□ -0.42
CAPN1-207ENST00000527189 RNF4P78317 190 aa12.44□□□□□ -0.42
CAPN1-207ENST00000527189 GTF2H2Q13888 395 aa12.44□□□□□ -0.42
CAPN1-207ENST00000527189 ZNF630Q2M218 657 aaPredicted RBP12.44□□□□□ -0.42
CAPN1-207ENST00000527189 MPEG1Q2M385 716 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms