RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 CPEB2Q7Z5Q1 589 aaKnown RBP12.14□□□□□ -0.47
SMPD1-202ENST00000526280 ANKRD37Q7Z713 158 aa12.14□□□□□ -0.47
SMPD1-202ENST00000526280 APLFQ8IW19 511 aaPredicted RBP12.14□□□□□ -0.47
SMPD1-202ENST00000526280 EFCAB3Q8N7B9 438 aa12.14□□□□□ -0.47
SMPD1-202ENST00000526280 OR2T11Q8NH01 316 aa12.14□□□□□ -0.47
SMPD1-202ENST00000526280 ZNF75CPQ92670 426 aaPredicted RBP12.14□□□□□ -0.47
SMPD1-202ENST00000526280 EXTL1Q92935 676 aa12.14□□□□□ -0.47
SMPD1-202ENST00000526280 METTL2AQ96IZ6 378 aaKnown RBP12.14□□□□□ -0.47
SMPD1-202ENST00000526280 ZNF700Q9H0M5 742 aa12.14□□□□□ -0.47
SMPD1-202ENST00000526280 ING2Q9H160 280 aa12.14□□□□□ -0.47
SMPD1-202ENST00000526280 EPN3Q9H201 632 aa12.14□□□□□ -0.47
SMPD1-202ENST00000526280 C19orf25Q9UFG5 118 aaPredicted RBP12.14□□□□□ -0.47
SMPD1-202ENST00000526280 MCM8Q9UJA3 840 aa12.14□□□□□ -0.47
SMPD1-202ENST00000526280 CLDN16Q9Y5I7 305 aa12.14□□□□□ -0.47
SMPD1-202ENST00000526280 NBEAQ8NFP9 2946 aa12.14□□□□□ -0.47
SMPD1-202ENST00000526280 TCRBV16S1A1N1A0A5B0 115 aa12.13□□□□□ -0.47
SMPD1-202ENST00000526280 PIP5K1BO14986 540 aa12.13□□□□□ -0.47
SMPD1-202ENST00000526280 HPP00738 406 aa12.13□□□□□ -0.47
SMPD1-202ENST00000526280 COX6A1P12074 109 aa12.13□□□□□ -0.47
SMPD1-202ENST00000526280 BUD31P41223 144 aaPredicted RBP12.13□□□□□ -0.47
SMPD1-202ENST00000526280 TRA2BP62995 288 aaKnown RBP12.13□□□□□ -0.47
SMPD1-202ENST00000526280 EEF1A2Q05639 463 aaKnown RBP12.13□□□□□ -0.47
SMPD1-202ENST00000526280 SLC13A2Q13183 592 aa12.13□□□□□ -0.47
SMPD1-202ENST00000526280 KIAA0040Q15053 153 aa12.13□□□□□ -0.47
SMPD1-202ENST00000526280 PCOLCEQ15113 449 aa12.13□□□□□ -0.47
SMPD1-202ENST00000526280 LINC00303Q3SY05 128 aa12.13□□□□□ -0.47
SMPD1-202ENST00000526280 CPZQ66K79 652 aa12.13□□□□□ -0.47
SMPD1-202ENST00000526280 DDIASQ8IXT1 998 aa12.13□□□□□ -0.47
SMPD1-202ENST00000526280 KIRREL3Q8IZU9 778 aa12.13□□□□□ -0.47
SMPD1-202ENST00000526280 BCAS4Q8TDM0 211 aa12.13□□□□□ -0.47
SMPD1-202ENST00000526280 TANKQ92844 425 aa12.13□□□□□ -0.47
SMPD1-202ENST00000526280 ANKRD9Q96BM1 317 aaPredicted RBP12.13□□□□□ -0.47
SMPD1-202ENST00000526280 TM4SF18Q96CE8 201 aa12.13□□□□□ -0.47
SMPD1-202ENST00000526280 CCT7Q99832 543 aa12.13□□□□□ -0.47
SMPD1-202ENST00000526280 WDR77Q9BQA1 342 aaPredicted RBP12.13□□□□□ -0.47
SMPD1-202ENST00000526280 TRIM55Q9BYV6 548 aa12.13□□□□□ -0.47
SMPD1-202ENST00000526280 RPF2Q9H7B2 306 aaKnown RBP12.13□□□□□ -0.47
SMPD1-202ENST00000526280 LRTM1Q9HBL6 345 aa12.13□□□□□ -0.47
SMPD1-202ENST00000526280 ATP13A2Q9NQ11 1180 aa12.13□□□□□ -0.47
SMPD1-202ENST00000526280 C1orf109Q9NX04 203 aa12.13□□□□□ -0.47
SMPD1-202ENST00000526280 TEX10Q9NXF1 929 aaPredicted RBP12.13□□□□□ -0.47
SMPD1-202ENST00000526280 ATMQ13315 3056 aa12.13□□□□□ -0.47
SMPD1-202ENST00000526280 NSG1A0A0A6YYJ2 146 aa12.12□□□□□ -0.47
SMPD1-202ENST00000526280 IGHV3-20A0A0C4DH32 117 aa12.12□□□□□ -0.47
SMPD1-202ENST00000526280 TGFBR3LH3BV60 316 aa12.12□□□□□ -0.47
SMPD1-202ENST00000526280 MASP2O00187 686 aa12.12□□□□□ -0.47
SMPD1-202ENST00000526280 LSM1O15116 133 aaKnown RBP12.12□□□□□ -0.47
SMPD1-202ENST00000526280 PGRMC2O15173 223 aa12.12□□□□□ -0.47
SMPD1-202ENST00000526280 PCDH7O60245 1069 aa12.12□□□□□ -0.47
SMPD1-202ENST00000526280 GUCY1B2O75343 617 aa12.12□□□□□ -0.47
SMPD1-202ENST00000526280 SEC22BO75396 215 aa12.12□□□□□ -0.47
SMPD1-202ENST00000526280 PRKRAO75569 313 aaKnown RBP12.12□□□□□ -0.47
SMPD1-202ENST00000526280 AIFM1O95831 613 aa12.12□□□□□ -0.47
SMPD1-202ENST00000526280 NR2F6P10588 404 aa12.12□□□□□ -0.47
SMPD1-202ENST00000526280 TIA1P31483 386 aaKnown RBP eCLIP12.12□□□□□ -0.47
SMPD1-202ENST00000526280 SOX8P57073 446 aa12.12□□□□□ -0.47
SMPD1-202ENST00000526280 OR4D2P58180 307 aa12.12□□□□□ -0.47
SMPD1-202ENST00000526280 OCRLQ01968 901 aa12.12□□□□□ -0.47
SMPD1-202ENST00000526280 CHAF1BQ13112 559 aa12.12□□□□□ -0.47
SMPD1-202ENST00000526280 SFT2D3Q587I9 215 aa12.12□□□□□ -0.47
SMPD1-202ENST00000526280 XKR7Q5GH72 579 aa12.12□□□□□ -0.47
SMPD1-202ENST00000526280 NDUFAF5Q5TEU4 345 aa12.12□□□□□ -0.47
SMPD1-202ENST00000526280 CLNKQ7Z7G1 428 aa12.12□□□□□ -0.47
SMPD1-202ENST00000526280 CLEC1AQ8NC01 280 aa12.12□□□□□ -0.47
SMPD1-202ENST00000526280 IMMP1LQ96LU5 166 aa12.12□□□□□ -0.47
SMPD1-202ENST00000526280 C3orf30Q96M34 536 aa12.12□□□□□ -0.47
SMPD1-202ENST00000526280 WDR41Q9HAD4 459 aa12.12□□□□□ -0.47
SMPD1-202ENST00000526280 ZNF160Q9HCG1 818 aa12.12□□□□□ -0.47
SMPD1-202ENST00000526280 INTS9Q9NV88 658 aaKnown RBP12.12□□□□□ -0.47
SMPD1-202ENST00000526280 PNPOQ9NVS9 261 aa12.12□□□□□ -0.47
SMPD1-202ENST00000526280 GNG14A0A1W2PPG7 69 aa12.11□□□□□ -0.47
SMPD1-202ENST00000526280 SYNDIG1LA6NDD5 238 aa12.11□□□□□ -0.47
SMPD1-202ENST00000526280 GLOD5A6NK44 160 aa12.11□□□□□ -0.47
SMPD1-202ENST00000526280 WASHC1A8K0Z3 465 aa12.11□□□□□ -0.47
SMPD1-202ENST00000526280 ERVH48-1M5A8F1 160 aa12.11□□□□□ -0.47
SMPD1-202ENST00000526280 FGF17O60258 216 aa12.11□□□□□ -0.47
SMPD1-202ENST00000526280 LDB3O75112 727 aa12.11□□□□□ -0.47
SMPD1-202ENST00000526280 SKAP2O75563 359 aaPredicted RBP12.11□□□□□ -0.47
SMPD1-202ENST00000526280 CEACAM4O75871 244 aa12.11□□□□□ -0.47
SMPD1-202ENST00000526280 DNAJB5O75953 348 aa12.11□□□□□ -0.47
SMPD1-202ENST00000526280 JUNP05412 331 aaKnown RBP12.11□□□□□ -0.47
SMPD1-202ENST00000526280 ANXA4P09525 319 aaPredicted RBP12.11□□□□□ -0.47
SMPD1-202ENST00000526280 PPP2R1BP30154 601 aa12.11□□□□□ -0.47
SMPD1-202ENST00000526280 GSTM5P46439 218 aa12.11□□□□□ -0.47
SMPD1-202ENST00000526280 CCL11P51671 97 aa12.11□□□□□ -0.47
SMPD1-202ENST00000526280 POLE2P56282 527 aa12.11□□□□□ -0.47
SMPD1-202ENST00000526280 IGLV3-21P80748 117 aaPredicted RBP12.11□□□□□ -0.47
SMPD1-202ENST00000526280 ACTN3Q08043 901 aaPredicted RBP12.11□□□□□ -0.47
SMPD1-202ENST00000526280 Q0VFX4 171 aa12.11□□□□□ -0.47
SMPD1-202ENST00000526280 STX4Q12846 297 aa12.11□□□□□ -0.47
SMPD1-202ENST00000526280 AIMP2Q13155 320 aaKnown RBP12.11□□□□□ -0.47
SMPD1-202ENST00000526280 BIKQ13323 160 aa12.11□□□□□ -0.47
SMPD1-202ENST00000526280 NR6A1Q15406 480 aa12.11□□□□□ -0.47
SMPD1-202ENST00000526280 NOXRED1Q6NXP6 359 aa12.11□□□□□ -0.47
SMPD1-202ENST00000526280 C7orf57Q8NEG2 295 aa12.11□□□□□ -0.47
SMPD1-202ENST00000526280 DNAJB14Q8TBM8 379 aa12.11□□□□□ -0.47
SMPD1-202ENST00000526280 C16orf78Q8WTQ4 265 aa12.11□□□□□ -0.47
SMPD1-202ENST00000526280 DYDC1Q8WWB3 177 aa12.11□□□□□ -0.47
SMPD1-202ENST00000526280 UCN3Q969E3 161 aa12.11□□□□□ -0.47
SMPD1-202ENST00000526280 C19orf60Q96EN9 201 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms