RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 FBXO30Q8TB52 745 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 KIFAP3Q92845 792 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 NCLNQ969V3 563 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 TMIGD2Q96BF3 282 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 ATXN7L3BQ96GX2 97 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 RADILQ96JH8 1075 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 ADPGKQ9BRR6 497 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 LLPHQ9BRT6 129 aaKnown RBP3.25□□□□□ -1.89
CD44-217ENST00000525348 RAB11FIP5Q9BXF6 653 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 TDRD1Q9BXT4 1180 aaKnown RBP3.25□□□□□ -1.89
CD44-217ENST00000525348 NYXQ9GZU5 481 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 NTN4Q9HB63 628 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 PIH1D3Q9NQM4 214 aaKnown RBP3.25□□□□□ -1.89
CD44-217ENST00000525348 FARSBQ9NSD9 589 aaKnown RBP3.25□□□□□ -1.89
CD44-217ENST00000525348 IARS2Q9NSE4 1012 aaKnown RBP3.25□□□□□ -1.89
CD44-217ENST00000525348 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.25□□□□□ -1.89
CD44-217ENST00000525348 IL37Q9NZH6 218 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 MORF4L1Q9UBU8 362 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 CLEC4AQ9UMR7 237 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 SH3GLB1Q9Y371 365 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 WIPI2Q9Y4P8 454 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 KIAA0556O60303 1618 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 UHRF1BP1Q6BDS2 1440 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 IQGAP2Q13576 1575 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 KIAA1217Q5T5P2 1943 aa3.25□□□□□ -1.89
CD44-217ENST00000525348 RICTORQ6R327 1708 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 ARAP3Q8WWN8 1544 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 MROH5Q6ZUA9 1318 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 C3P01024 1663 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 FANCAO15360 1455 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 IQANK1A0A1B0GTG1 560 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 MTMR11A4FU01 709 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 GLTPD2A6NH11 291 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 SLC9B1P1A6NJY1 282 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 E9PMD0 336 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 SGK1O00141 431 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 KMOO15229 486 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 AP5Z1O43299 807 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 RIPK2O43353 540 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 SULT1B1O43704 296 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 PALMO75781 387 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 CEACAM4O75871 244 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 ADCY5O95622 1261 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 ECDO95905 644 aaPredicted RBP3.24□□□□□ -1.89
CD44-217ENST00000525348 GSRP00390 522 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 IGHV3-13P01766 116 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 OR52Z1P0C646 297 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 POLR2MP0CAP2 368 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 CCDC192P0DO97 292 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 SAGP10523 405 aaPredicted RBP3.24□□□□□ -1.89
CD44-217ENST00000525348 AKR1B1P15121 316 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 STMN1P16949 149 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 IL32P24001 234 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 PPP1R2P41236 205 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 GPX6P59796 221 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 SSTP61278 116 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 TPM4P67936 248 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 PRKCEQ02156 737 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 SULT2A1Q06520 285 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 C17orf67Q0P5P2 114 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 DYNC1I2Q13409 638 aaKnown RBP3.24□□□□□ -1.89
CD44-217ENST00000525348 CUL2Q13617 745 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 MXD4Q14582 209 aaPredicted RBP3.24□□□□□ -1.89
CD44-217ENST00000525348 PSMD6Q15008 389 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 NDUFA5Q16718 116 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 MTHFSDQ2M296 383 aaKnown RBP3.24□□□□□ -1.89
CD44-217ENST00000525348 CFAP221Q4G0U5 840 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 OR4C11Q6IEV9 310 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 PPP1R2P3Q6NXS1 205 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 RBPMS2Q6ZRY4 209 aaKnown RBP3.24□□□□□ -1.89
CD44-217ENST00000525348 FAM47EQ6ZV65 393 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 DNAJB7Q7Z6W7 309 aaPredicted RBP3.24□□□□□ -1.89
CD44-217ENST00000525348 SLC51BQ86UW2 128 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 IQCHQ86VS3 1027 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 SLC22A9Q8IVM8 553 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 RASGEF1AQ8N9B8 481 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 ZBTB44Q8NCP5 570 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 AGR3Q8TD06 166 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 RPGRIP1Q96KN7 1286 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 JAKMIP1Q96N16 626 aaKnown RBP3.24□□□□□ -1.89
CD44-217ENST00000525348 KLHL5Q96PQ7 755 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 SECISBP2Q96T21 854 aaKnown RBP3.24□□□□□ -1.89
CD44-217ENST00000525348 BCL7BQ9BQE9 202 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 PRRG4Q9BZD6 226 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 ACPTQ9BZG2 426 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 HOXD1Q9GZZ0 328 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 STMN4Q9H169 189 aaPredicted RBP3.24□□□□□ -1.89
CD44-217ENST00000525348 GBA3Q9H227 469 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 ADNPQ9H2P0 1102 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 TPK1Q9H3S4 243 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 HAUS4Q9H6D7 363 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 EGLN3Q9H6Z9 239 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 GNB4Q9HAV0 340 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 SLC7A10Q9NS82 523 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 THAP10Q9P2Z0 257 aaPredicted RBP3.24□□□□□ -1.89
CD44-217ENST00000525348 CIDEBQ9UHD4 219 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 FAM153AQ9UHL3 310 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 ANAPC5Q9UJX4 755 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 EXOC6BQ9Y2D4 811 aa3.24□□□□□ -1.89
CD44-217ENST00000525348 CAB39Q9Y376 341 aaPredicted RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms