RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 NUAK2Q9H093 628 aa6.42□□□□□ -1.38
NEDD8-203ENST00000524927 DDIT4Q9NX09 232 aa6.42□□□□□ -1.38
NEDD8-203ENST00000524927 TEKT2Q9UIF3 430 aa6.42□□□□□ -1.38
NEDD8-203ENST00000524927 HSF4Q9ULV5 492 aa6.42□□□□□ -1.38
NEDD8-203ENST00000524927 HPCAL4Q9UM19 191 aa6.42□□□□□ -1.38
NEDD8-203ENST00000524927 PCYT1BQ9Y5K3 369 aaPredicted RBP6.42□□□□□ -1.38
NEDD8-203ENST00000524927 DNAJC13O75165 2243 aa6.41□□□□□ -1.38
NEDD8-203ENST00000524927 TCRBV5S1A1TA0A578 114 aa6.41□□□□□ -1.38
NEDD8-203ENST00000524927 OR5K3A6NET4 321 aa6.41□□□□□ -1.38
NEDD8-203ENST00000524927 TARM1B6A8C7 271 aa6.41□□□□□ -1.38
NEDD8-203ENST00000524927 SOD1P00441 154 aa6.41□□□□□ -1.38
NEDD8-203ENST00000524927 ALDOCP09972 364 aaKnown RBP6.41□□□□□ -1.38
NEDD8-203ENST00000524927 VDRP11473 427 aa6.41□□□□□ -1.38
NEDD8-203ENST00000524927 LYL1P12980 280 aa6.41□□□□□ -1.38
NEDD8-203ENST00000524927 ITGAXP20702 1163 aa6.41□□□□□ -1.38
NEDD8-203ENST00000524927 PSMC2P35998 433 aaKnown RBP6.41□□□□□ -1.38
NEDD8-203ENST00000524927 RPL34P49207 117 aaKnown RBP6.41□□□□□ -1.38
NEDD8-203ENST00000524927 ATP5J2P56134 94 aa6.41□□□□□ -1.38
NEDD8-203ENST00000524927 ACTG1P63261 375 aa6.41□□□□□ -1.38
NEDD8-203ENST00000524927 CEBPZQ03701 1054 aaKnown RBP6.41□□□□□ -1.38
NEDD8-203ENST00000524927 KPNB1Q14974 876 aaKnown RBP6.41□□□□□ -1.38
NEDD8-203ENST00000524927 GPR68Q15743 365 aa6.41□□□□□ -1.38
NEDD8-203ENST00000524927 NFIL3Q16649 462 aa6.41□□□□□ -1.38
NEDD8-203ENST00000524927 AWAT1Q58HT5 328 aa6.41□□□□□ -1.38
NEDD8-203ENST00000524927 C1orf189Q5VU69 101 aa6.41□□□□□ -1.38
NEDD8-203ENST00000524927 ARHGAP11AQ6P4F7 1023 aa6.41□□□□□ -1.38
NEDD8-203ENST00000524927 ABRAXAS1Q6UWZ7 409 aa6.41□□□□□ -1.38
NEDD8-203ENST00000524927 RANBP10Q6VN20 620 aa6.41□□□□□ -1.38
NEDD8-203ENST00000524927 B3GNT6Q6ZMB0 384 aa6.41□□□□□ -1.38
NEDD8-203ENST00000524927 NDUFAF7Q7L592 441 aa6.41□□□□□ -1.38
NEDD8-203ENST00000524927 STRADAQ7RTN6 431 aa6.41□□□□□ -1.38
NEDD8-203ENST00000524927 TRIM74Q86UV6 250 aa6.41□□□□□ -1.38
NEDD8-203ENST00000524927 DNAAF5Q86Y56 855 aa6.41□□□□□ -1.38
NEDD8-203ENST00000524927 C12orf56Q8IXR9 622 aa6.41□□□□□ -1.38
NEDD8-203ENST00000524927 SLC22A8Q8TCC7 542 aa6.41□□□□□ -1.38
NEDD8-203ENST00000524927 ECHDC3Q96DC8 303 aa6.41□□□□□ -1.38
NEDD8-203ENST00000524927 PGAP3Q96FM1 320 aaPredicted RBP6.41□□□□□ -1.38
NEDD8-203ENST00000524927 COX14Q96I36 57 aa6.41□□□□□ -1.38
NEDD8-203ENST00000524927 ZNF845Q96IR2 970 aaPredicted RBP6.41□□□□□ -1.38
NEDD8-203ENST00000524927 C1orf74Q96LT6 269 aa6.41□□□□□ -1.38
NEDD8-203ENST00000524927 OLFM1Q99784 485 aa6.41□□□□□ -1.38
NEDD8-203ENST00000524927 TRIM31Q9BZY9 425 aa6.41□□□□□ -1.38
NEDD8-203ENST00000524927 RETREG1Q9H6L5 497 aa6.41□□□□□ -1.38
NEDD8-203ENST00000524927 SYNPO2LQ9H987 977 aa6.41□□□□□ -1.38
NEDD8-203ENST00000524927 SAMSN1Q9NSI8 373 aaKnown RBP6.41□□□□□ -1.38
NEDD8-203ENST00000524927 CGNQ9P2M7 1197 aaKnown RBP6.41□□□□□ -1.38
NEDD8-203ENST00000524927 DHCR7Q9UBM7 475 aaKnown RBP6.41□□□□□ -1.38
NEDD8-203ENST00000524927 NXT1Q9UKK6 140 aaKnown RBP6.41□□□□□ -1.38
NEDD8-203ENST00000524927 KIAA1257Q9ULG3 409 aa6.41□□□□□ -1.38
NEDD8-203ENST00000524927 EIF3LQ9Y262 564 aaKnown RBP6.41□□□□□ -1.38
NEDD8-203ENST00000524927 SIRT4Q9Y6E7 314 aaPredicted RBP6.41□□□□□ -1.38
NEDD8-203ENST00000524927 DSCAMO60469 2012 aa6.41□□□□□ -1.38
NEDD8-203ENST00000524927 SYNJ2BP-COX16A0A087WUM0 186 aa6.4□□□□□ -1.38
NEDD8-203ENST00000524927 NSG1A0A0A6YYJ2 146 aa6.4□□□□□ -1.38
NEDD8-203ENST00000524927 FAM157AC9JC47 383 aa6.4□□□□□ -1.38
NEDD8-203ENST00000524927 POC1B-GALNT4F8VUJ3 575 aa6.4□□□□□ -1.38
NEDD8-203ENST00000524927 PSMD11O00231 422 aa6.4□□□□□ -1.38
NEDD8-203ENST00000524927 GAPDHSO14556 408 aaPredicted RBP6.4□□□□□ -1.38
NEDD8-203ENST00000524927 MAP2K7O14733 419 aa6.4□□□□□ -1.38
NEDD8-203ENST00000524927 ENO1P06733 434 aaKnown RBP6.4□□□□□ -1.38
NEDD8-203ENST00000524927 NSG1P42857 185 aa6.4□□□□□ -1.38
NEDD8-203ENST00000524927 TBL3Q12788 808 aaKnown RBP6.4□□□□□ -1.38
NEDD8-203ENST00000524927 VAX1Q5SQQ9 334 aa6.4□□□□□ -1.38
NEDD8-203ENST00000524927 TXNRD3NBQ6F5E7 133 aa6.4□□□□□ -1.38
NEDD8-203ENST00000524927 GALNT4Q8N4A0 578 aa6.4□□□□□ -1.38
NEDD8-203ENST00000524927 LINC01560Q8TB33 94 aa6.4□□□□□ -1.38
NEDD8-203ENST00000524927 IGFBPL1Q8WX77 278 aa6.4□□□□□ -1.38
NEDD8-203ENST00000524927 HDAC2Q92769 488 aaKnown RBP6.4□□□□□ -1.38
NEDD8-203ENST00000524927 ZUFSPQ96AP4 578 aa6.4□□□□□ -1.38
NEDD8-203ENST00000524927 REPS1Q96D71 796 aa6.4□□□□□ -1.38
NEDD8-203ENST00000524927 CXorf40BQ96DE9 158 aa6.4□□□□□ -1.38
NEDD8-203ENST00000524927 ZNF764Q96H86 408 aaPredicted RBP6.4□□□□□ -1.38
NEDD8-203ENST00000524927 DACH2Q96NX9 599 aa6.4□□□□□ -1.38
NEDD8-203ENST00000524927 PKP2Q99959 881 aa6.4□□□□□ -1.38
NEDD8-203ENST00000524927 HDHD5Q9BXW7 423 aa6.4□□□□□ -1.38
NEDD8-203ENST00000524927 ZYG11BQ9C0D3 744 aa6.4□□□□□ -1.38
NEDD8-203ENST00000524927 ATG10Q9H0Y0 220 aa6.4□□□□□ -1.38
NEDD8-203ENST00000524927 SLC26A1Q9H2B4 701 aa6.4□□□□□ -1.38
NEDD8-203ENST00000524927 KLK15Q9H2R5 256 aa6.4□□□□□ -1.38
NEDD8-203ENST00000524927 KLHL1Q9NR64 748 aa6.4□□□□□ -1.38
NEDD8-203ENST00000524927 PANK4Q9NVE7 773 aa6.4□□□□□ -1.38
NEDD8-203ENST00000524927 HRASLS2Q9NWW9 162 aa6.4□□□□□ -1.38
NEDD8-203ENST00000524927 COX16Q9P0S2 106 aa6.4□□□□□ -1.38
NEDD8-203ENST00000524927 MTRF1LQ9UGC7 380 aaKnown RBP6.4□□□□□ -1.38
NEDD8-203ENST00000524927 RYR2Q92736 4967 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 HYKKA2RU49 373 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 NPIPB13A6NJU9 1138 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 NPIPB5A8MRT5 1133 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 A8MX80 341 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 EIF3CLB5ME19 914 aaKnown RBP6.39□□□□□ -1.39
NEDD8-203ENST00000524927 NPIPB4C9JG80 1138 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 DSCR3O14972 297 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 MAPK13O15264 365 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 KDELR3O43731 214 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 GUCY1B2O75343 617 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 CYP4B1P13584 511 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 HNF1AP20823 631 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 PRPH2P23942 346 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 ZNF84P51523 738 aa6.39□□□□□ -1.39
NEDD8-203ENST00000524927 RPS6KA3P51812 740 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms