RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 PCNX2A6NKB5 2137 aa2.86□□□□□ -1.95
CSDE1-208ENST00000524652 ATMQ13315 3056 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 A0A087WV62 115 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 OR6C68A6NDL8 312 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 PRR23AA6NEV1 266 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 FAM47DPA6NHR8 397 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 ANKRD66B4E2M5 251 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 GOLGA8MH3BSY2 632 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 CCDC188H7C350 402 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 KIF2AO00139 706 aaPredicted RBP2.85□□□□□ -1.95
CSDE1-208ENST00000524652 CCL22O00626 93 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 TIMM23O14925 209 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 RAD51BO15315 384 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 BUD23O43709 281 aaKnown RBP2.85□□□□□ -1.95
CSDE1-208ENST00000524652 SYNCRIPO60506 623 aaKnown RBP2.85□□□□□ -1.95
CSDE1-208ENST00000524652 SEC31AO94979 1220 aaKnown RBP2.85□□□□□ -1.95
CSDE1-208ENST00000524652 AP2A1O95782 977 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 CH25HO95992 272 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 C1QAP02745 245 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 DNTTP04053 509 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 SERPINF2P08697 491 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 ACP5P13686 325 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 TPSB2P20231 275 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 ANOS1P23352 680 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 MAT2AP31153 395 aaKnown RBP2.85□□□□□ -1.95
CSDE1-208ENST00000524652 HOXA6P31267 233 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 STIP1P31948 543 aaKnown RBP2.85□□□□□ -1.95
CSDE1-208ENST00000524652 HSPA9P38646 679 aaKnown RBP2.85□□□□□ -1.95
CSDE1-208ENST00000524652 RPL3P39023 403 aaKnown RBP2.85□□□□□ -1.95
CSDE1-208ENST00000524652 MMP12P39900 470 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 NNMTP40261 264 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 CETN2P41208 172 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 PAFAH1B1P43034 410 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 PTGER3P43115 390 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 MAGEA3P43357 314 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 MAGEA6P43360 314 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 MVDP53602 400 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 GEMP55040 296 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 CRADDP78560 199 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 BASP1P80723 227 aaKnown RBP2.85□□□□□ -1.95
CSDE1-208ENST00000524652 DR1Q01658 176 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 FAM27E3Q08E93 113 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 GALNT1Q10472 559 aaPredicted RBP2.85□□□□□ -1.95
CSDE1-208ENST00000524652 THOC5Q13769 683 aaKnown RBP2.85□□□□□ -1.95
CSDE1-208ENST00000524652 FASTKD3Q14CZ7 662 aaKnown RBP2.85□□□□□ -1.95
CSDE1-208ENST00000524652 TPSAB1Q15661 275 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 SMAD1Q15797 465 aaKnown RBP2.85□□□□□ -1.95
CSDE1-208ENST00000524652 CCDC6Q16204 474 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 RPE65Q16518 533 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 LPAL2Q16609 132 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 WHAMMP3Q1A5X7 153 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 ZNF528Q3MIS6 628 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 TMEM52BQ4KMG9 183 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 CCDC38Q502W7 563 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 RUNDC3AQ59EK9 446 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 RNASEH2BQ5TBB1 312 aaKnown RBP2.85□□□□□ -1.95
CSDE1-208ENST00000524652 LRRC66Q68CR7 880 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 PMS2CLQ68D20 193 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 DUPD1Q68J44 220 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 CES3Q6UWW8 571 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 GCNT7Q6ZNI0 430 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 C9orf139Q6ZV77 190 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 ERN2Q76MJ5 926 aaKnown RBP2.85□□□□□ -1.95
CSDE1-208ENST00000524652 DPPA4Q7L190 304 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 GSTA5Q7RTV2 222 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 HSD11B1LQ7Z5J1 315 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 SMIM29Q86T20 159 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 KBTBD6Q86V97 674 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 LONP2Q86WA8 852 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 SLC22A18ASQ8N1D0 253 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 TTC30BQ8N4P2 665 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 MMGT1Q8N4V1 131 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 GPR26Q8NDV2 337 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 LPCAT1Q8NF37 534 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 IPMKQ8NFU5 416 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 KIF18AQ8NI77 898 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 HCAR2Q8TDS4 363 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 NAT14Q8WUY8 206 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 MAIP1Q8WWC4 291 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 ATOH1Q92858 354 aaPredicted RBP2.85□□□□□ -1.95
CSDE1-208ENST00000524652 EXOC4Q96A65 974 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 BIRC7Q96CA5 298 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 SCRN2Q96FV2 425 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 FEM1CQ96JP0 617 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 ZNF641Q96N77 438 aaPredicted RBP2.85□□□□□ -1.95
CSDE1-208ENST00000524652 SERPINB12Q96P63 405 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 LYSMD1Q96S90 227 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 NAP1L3Q99457 506 aaPredicted RBP2.85□□□□□ -1.95
CSDE1-208ENST00000524652 VAT1Q99536 393 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 KLF6Q99612 283 aaPredicted RBP2.85□□□□□ -1.95
CSDE1-208ENST00000524652 OMDQ99983 421 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 ERP44Q9BS26 406 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 WRAP53Q9BUR4 548 aaKnown RBP2.85□□□□□ -1.95
CSDE1-208ENST00000524652 GPR174Q9BXC1 333 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 FRMD8P1Q9BZ68 369 aaPredicted RBP2.85□□□□□ -1.95
CSDE1-208ENST00000524652 DPH5Q9H2P9 285 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 ATP13A3Q9H7F0 1226 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 MVB12BQ9H7P6 319 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 ANKZF1Q9H8Y5 726 aa2.85□□□□□ -1.95
CSDE1-208ENST00000524652 ARNT2Q9HBZ2 717 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms