RNA–Protein interactions for RNA: ENST00000523805.5

PTK2-253, Transcript of protein tyrosine kinase 2, human

TSL 3

Gene PTK2, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-253	ENST00000523805	ZNF407	Q9C0G0	2248 aa		7.52	□□□□□ -1.21
PTK2-253	ENST00000523805	KCNE1B	A0A087WTH5	132 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	TRBV11-1	A0A0K0K1C0	115 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	TRBC2	A0A5B9	178 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	GOLGA6L10	A6NI86	522 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	MAGEB17	A8MXT2	336 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805		E7ESA3	106 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	PSMD12	O00232	456 aa	Predicted RBP	7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	EIF3F	O00303	357 aa	Predicted RBP	7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	SLC16A5	O15375	505 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	CDC40	O60508	579 aa	Known RBP eCLIP	7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	TTC4	O95801	387 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	TSPAN12	O95859	305 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	ABHD2	P08910	425 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	COX6B1	P14854	86 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	ZNF24	P17028	368 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	JAK1	P23458	1154 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	TPP2	P29144	1249 aa	Predicted RBP	7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	GPR85	P60893	370 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	ADORA2A-AS1	P86434	159 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	REEP5	Q00765	189 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	RELA	Q04206	551 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	FASTKD3	Q14CZ7	662 aa	Known RBP	7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	HERC3	Q15034	1050 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	CDSN	Q15517	529 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	WIPI1	Q5MNZ9	446 aa	Predicted RBP	7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	TEDDM1	Q5T9Z0	273 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	ARMC3	Q5W041	872 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	FAM45BP	Q6NSW5	357 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	LETMD1	Q6P1Q0	360 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	LCNL1	Q6ZST4	164 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	ABHD13	Q7L211	337 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	CLNK	Q7Z7G1	428 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	THOC6	Q86W42	341 aa	Known RBP	7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	CCDC25	Q86WR0	208 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	TICAM1	Q8IUC6	712 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	TBC1D19	Q8N5T2	526 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	CPSF7	Q8N684	471 aa	Known RBP	7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	FAM47B	Q8NA70	645 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	TMEM178A	Q8NBL3	297 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	FAM98A	Q8NCA5	519 aa	Known RBP	7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	OR56A3	Q8NH54	315 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	DNAJB8	Q8NHS0	232 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	M1AP	Q8TC57	530 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	FAM45A	Q8TCE6	357 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	EXT2	Q93063	718 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	RELT	Q969Z4	430 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	LRRC39	Q96DD0	335 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	COX4I2	Q96KJ9	171 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	FRMD6	Q96NE9	622 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	WDR83	Q9BRX9	315 aa	Known RBP	7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	CDC42EP4	Q9H3Q1	356 aa	Known RBP	7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	PPCS	Q9HAB8	311 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	PLAC1	Q9HBJ0	212 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	MMP25	Q9NPA2	562 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	PNO1	Q9NRX1	252 aa	Known RBP	7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	FBXW2	Q9UKT8	454 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	SLC22A14	Q9Y267	594 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	PSAT1	Q9Y617	370 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	SLC22A7	Q9Y694	548 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	CENPE	Q02224	2701 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	ITPR2	Q14571	2701 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	DNAJC13	O75165	2243 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	ABCA12	Q86UK0	2595 aa		7.51	□□□□□ -1.21
PTK2-253	ENST00000523805	NCKAP5	O14513	1909 aa		7.5	□□□□□ -1.21
PTK2-253	ENST00000523805	C19orf84	I3L1E1	186 aa		7.5	□□□□□ -1.21
PTK2-253	ENST00000523805	TFEC	O14948	347 aa	Predicted RBP	7.5	□□□□□ -1.21
PTK2-253	ENST00000523805	CLGN	O14967	610 aa		7.5	□□□□□ -1.21
PTK2-253	ENST00000523805	RIPK2	O43353	540 aa		7.5	□□□□□ -1.21
PTK2-253	ENST00000523805	SH3BGRL	O75368	114 aa		7.5	□□□□□ -1.21
PTK2-253	ENST00000523805	SLC25A12	O75746	678 aa		7.5	□□□□□ -1.21
PTK2-253	ENST00000523805	WDR47	O94967	919 aa		7.5	□□□□□ -1.21
PTK2-253	ENST00000523805	SP1	P08047	785 aa		7.5	□□□□□ -1.21
PTK2-253	ENST00000523805	ZNF37A	P17032	561 aa	Predicted RBP	7.5	□□□□□ -1.21
PTK2-253	ENST00000523805	PPP2R1B	P30154	601 aa		7.5	□□□□□ -1.21
PTK2-253	ENST00000523805	PTGER1	P34995	402 aa		7.5	□□□□□ -1.21
PTK2-253	ENST00000523805	PHB	P35232	272 aa		7.5	□□□□□ -1.21
PTK2-253	ENST00000523805	GDF5	P43026	501 aa		7.5	□□□□□ -1.21
PTK2-253	ENST00000523805	MAGEA4	P43358	317 aa		7.5	□□□□□ -1.21
PTK2-253	ENST00000523805	MEOX1	P50221	254 aa		7.5	□□□□□ -1.21
PTK2-253	ENST00000523805	BTN3A2	P78410	334 aa		7.5	□□□□□ -1.21
PTK2-253	ENST00000523805	IFFO1	Q0D2I5	559 aa		7.5	□□□□□ -1.21
PTK2-253	ENST00000523805	PDIA2	Q13087	525 aa	Known RBP	7.5	□□□□□ -1.21
PTK2-253	ENST00000523805	TSN	Q15631	228 aa	Known RBP	7.5	□□□□□ -1.21
PTK2-253	ENST00000523805	UAP1	Q16222	522 aa	Predicted RBP	7.5	□□□□□ -1.21
PTK2-253	ENST00000523805	ADNP2	Q6IQ32	1131 aa		7.5	□□□□□ -1.21
PTK2-253	ENST00000523805	SLC25A25	Q6KCM7	469 aa		7.5	□□□□□ -1.21
PTK2-253	ENST00000523805	SBSN	Q6UWP8	590 aa		7.5	□□□□□ -1.21
PTK2-253	ENST00000523805	BNC2	Q6ZN30	1099 aa	Predicted RBP	7.5	□□□□□ -1.21
PTK2-253	ENST00000523805	KIAA0408	Q6ZU52	694 aa		7.5	□□□□□ -1.21
PTK2-253	ENST00000523805	STRA8	Q7Z7C7	330 aa		7.5	□□□□□ -1.21
PTK2-253	ENST00000523805	RPS19BP1	Q86WX3	136 aa	Known RBP	7.5	□□□□□ -1.21
PTK2-253	ENST00000523805	CNTN4	Q8IWV2	1026 aa		7.5	□□□□□ -1.21
PTK2-253	ENST00000523805	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	7.5	□□□□□ -1.21
PTK2-253	ENST00000523805	CNPY4	Q8N129	248 aa		7.5	□□□□□ -1.21
PTK2-253	ENST00000523805	SLC34A3	Q8N130	599 aa		7.5	□□□□□ -1.21
PTK2-253	ENST00000523805	SPATA6L	Q8N4H0	392 aa		7.5	□□□□□ -1.21
PTK2-253	ENST00000523805	ZNF808	Q8N4W9	903 aa	Predicted RBP	7.5	□□□□□ -1.21
PTK2-253	ENST00000523805	ANKRD53	Q8N9V6	530 aa		7.5	□□□□□ -1.21
PTK2-253	ENST00000523805	FBXO36	Q8NEA4	188 aa		7.5	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 41 ms