RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 CD300LGQ6UXG3 332 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 LRRN1Q6UXK5 716 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 IZUMO2Q6UXV1 221 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 CFAP77Q6ZQR2 320 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 TRILQ7L0X0 811 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 DYMQ7RTS9 669 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 SLC16A14Q7RTX9 510 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 ZNF720Q7Z2F6 126 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 ABHD12BQ7Z5M8 362 aaPredicted RBP7.21□□□□□ -1.26
HDAC3-216ENST00000523088 VTCN1Q7Z7D3 282 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.21□□□□□ -1.26
HDAC3-216ENST00000523088 ALYREFQ86V81 257 aaKnown RBP7.21□□□□□ -1.26
HDAC3-216ENST00000523088 NUDT13Q86X67 352 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 DHX40Q8IX18 779 aaKnown RBP7.21□□□□□ -1.26
HDAC3-216ENST00000523088 NPAS3Q8IXF0 933 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 GALNT4Q8N4A0 578 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 NANOGP1Q8N7R0 232 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 FAM169BQ8N8A8 192 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 TMEM105Q8N8V8 129 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 CCDC54Q8NEL0 328 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 OR6Y1Q8NGX8 325 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 KCNG4Q8TDN1 519 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 ST8SIA2Q92186 375 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 GTF2H4Q92759 462 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 HAS2Q92819 552 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 MR1Q95460 341 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 ELSPBP1Q96BH3 223 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 ELMO3Q96BJ8 720 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 C3orf49Q96BT1 292 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 FOXRED1Q96CU9 486 aaPredicted RBP7.21□□□□□ -1.26
HDAC3-216ENST00000523088 NSL1Q96IY1 281 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 ZBTB45Q96K62 511 aaPredicted RBP7.21□□□□□ -1.26
HDAC3-216ENST00000523088 RNF145Q96MT1 663 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 GCNAQ96QF7 691 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 ACCSQ96QU6 501 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 SMOQ99835 787 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 P2RY13Q9BPV8 354 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 MKNK1Q9BUB5 465 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 SLC5A7Q9GZV3 580 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 SCAND2PQ9GZW5 306 aaPredicted RBP7.21□□□□□ -1.26
HDAC3-216ENST00000523088 RGCCQ9H4X1 137 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 ZFP14Q9HCL3 533 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 POLD4Q9HCU8 107 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 ZNF334Q9HCZ1 680 aaPredicted RBP7.21□□□□□ -1.26
HDAC3-216ENST00000523088 NIT2Q9NQR4 276 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 TLR8Q9NR97 1041 aaKnown RBP7.21□□□□□ -1.26
HDAC3-216ENST00000523088 ABCB10Q9NRK6 738 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 SPHK1Q9NYA1 384 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 TAB2Q9NYJ8 693 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 KCND3Q9UK17 655 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 ELF5Q9UKW6 265 aaPredicted RBP7.21□□□□□ -1.26
HDAC3-216ENST00000523088 DNPEPQ9ULA0 475 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 SIT1Q9Y3P8 196 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 MMACHCQ9Y4U1 282 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 PCDHB11Q9Y5F2 797 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 U3KQV3 271 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 PATJQ8NI35 1801 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 F5P12259 2224 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 PTPRZ1P23471 2315 aaPredicted RBP7.2□□□□□ -1.26
HDAC3-216ENST00000523088 TRAV34A0A0B4J273 112 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 NPHP3-ACAD11A0A0J9YXS1 232 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 A0A0X1KG70 313 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 MROH6A6NGR9 719 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 PDZK1P1A8MUH7 402 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 A8MV72 311 aaPredicted RBP7.2□□□□□ -1.26
HDAC3-216ENST00000523088 CLDN25C9JDP6 229 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 FAM227AF5H4B4 570 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 H3BSA7 217 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 SULT1C2O00338 296 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 MAN2B1O00754 1011 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 CCSO14618 274 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 DFNA5O60443 496 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 PRKD3O94806 890 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 METTL18O95568 372 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 TOP3BO95985 862 aaKnown RBP7.2□□□□□ -1.26
HDAC3-216ENST00000523088 PAK4O96013 591 aaPredicted RBP7.2□□□□□ -1.26
HDAC3-216ENST00000523088 MT-CO1P00395 513 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 TP53P04637 393 aaPredicted RBP7.2□□□□□ -1.26
HDAC3-216ENST00000523088 TMEM191BP0C7N4 346 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 ZNF806P0C7X5 589 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 CCL2P13500 99 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 UQCRC1P31930 480 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 MC5RP33032 325 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 GRK5P34947 590 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 AHRP35869 848 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 ARR3P36575 388 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 MAP3K8P41279 467 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 NRG3P56975 720 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 LILRA4P59901 499 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 RAP1BP61224 184 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 YWHAGP61981 247 aaKnown RBP eCLIP7.2□□□□□ -1.26
HDAC3-216ENST00000523088 GPC5P78333 572 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 BLOC1S1P78537 153 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 CACNB1Q02641 598 aaPredicted RBP7.2□□□□□ -1.26
HDAC3-216ENST00000523088 PPP3CAQ08209 521 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 OVGP1Q12889 678 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 NAE1Q13564 534 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 KCNJ11Q14654 390 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 LARS2Q15031 903 aaKnown RBP7.2□□□□□ -1.26
HDAC3-216ENST00000523088 TMED2Q15363 201 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms