RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 PDK1Q15118 436 aa5.89□□□□□ -1.47
VPS13B-211ENST00000522802 PDK2Q15119 407 aa5.89□□□□□ -1.47
VPS13B-211ENST00000522802 TAF1AQ15573 450 aaPredicted RBP5.89□□□□□ -1.47
VPS13B-211ENST00000522802 MEP1AQ16819 746 aa5.89□□□□□ -1.47
VPS13B-211ENST00000522802 HKDC1Q2TB90 917 aa5.89□□□□□ -1.47
VPS13B-211ENST00000522802 NRN1LQ496H8 165 aa5.89□□□□□ -1.47
VPS13B-211ENST00000522802 FLYWCH1Q4VC44 716 aa5.89□□□□□ -1.47
VPS13B-211ENST00000522802 SYTL3Q4VX76 610 aa5.89□□□□□ -1.47
VPS13B-211ENST00000522802 RABL3Q5HYI8 236 aa5.89□□□□□ -1.47
VPS13B-211ENST00000522802 SLC9A4Q6AI14 798 aa5.89□□□□□ -1.47
VPS13B-211ENST00000522802 SLC25A25Q6KCM7 469 aa5.89□□□□□ -1.47
VPS13B-211ENST00000522802 C16orf47Q6ZP98 133 aaPredicted RBP5.89□□□□□ -1.47
VPS13B-211ENST00000522802 WDR53Q7Z5U6 358 aaPredicted RBP5.89□□□□□ -1.47
VPS13B-211ENST00000522802 SNX20Q7Z614 316 aa5.89□□□□□ -1.47
VPS13B-211ENST00000522802 VRK3Q8IV63 474 aa5.89□□□□□ -1.47
VPS13B-211ENST00000522802 PIANPQ8IYJ0 282 aa5.89□□□□□ -1.47
VPS13B-211ENST00000522802 KIF2BQ8N4N8 673 aa5.89□□□□□ -1.47
VPS13B-211ENST00000522802 SIMC1Q8NDZ2 872 aa5.89□□□□□ -1.47
VPS13B-211ENST00000522802 OR5M9Q8NGP3 310 aa5.89□□□□□ -1.47
VPS13B-211ENST00000522802 OR10Q1Q8NGQ4 319 aa5.89□□□□□ -1.47
VPS13B-211ENST00000522802 ELMO1Q92556 727 aa5.89□□□□□ -1.47
VPS13B-211ENST00000522802 ULK4Q96C45 1275 aa5.89□□□□□ -1.47
VPS13B-211ENST00000522802 MMABQ96EY8 250 aaPredicted RBP5.89□□□□□ -1.47
VPS13B-211ENST00000522802 ZNF503Q96F45 646 aa5.89□□□□□ -1.47
VPS13B-211ENST00000522802 CABS1Q96KC9 395 aa5.89□□□□□ -1.47
VPS13B-211ENST00000522802 Q96MF0 132 aa5.89□□□□□ -1.47
VPS13B-211ENST00000522802 RNF157Q96PX1 679 aa5.89□□□□□ -1.47
VPS13B-211ENST00000522802 DCLRE1CQ96SD1 692 aaKnown RBP5.89□□□□□ -1.47
VPS13B-211ENST00000522802 VRK1Q99986 396 aaPredicted RBP5.89□□□□□ -1.47
VPS13B-211ENST00000522802 APOL2Q9BQE5 337 aa5.89□□□□□ -1.47
VPS13B-211ENST00000522802 FSD1LQ9BXM9 530 aa5.89□□□□□ -1.47
VPS13B-211ENST00000522802 KRTAP9-8Q9BYQ0 159 aa5.89□□□□□ -1.47
VPS13B-211ENST00000522802 VPS37BQ9H9H4 285 aa5.89□□□□□ -1.47
VPS13B-211ENST00000522802 KCNK13Q9HB14 408 aa5.89□□□□□ -1.47
VPS13B-211ENST00000522802 MKKSQ9NPJ1 570 aaPredicted RBP5.89□□□□□ -1.47
VPS13B-211ENST00000522802 FBXO34Q9NWN3 711 aa5.89□□□□□ -1.47
VPS13B-211ENST00000522802 POLG2Q9UHN1 485 aa5.89□□□□□ -1.47
VPS13B-211ENST00000522802 MYRFQ9Y2G1 1151 aa5.89□□□□□ -1.47
VPS13B-211ENST00000522802 MPDZO75970 2070 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 HEATR5BQ9P2D3 2071 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 TRBV5-4A0A0C4DH59 114 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 SLC5A10A0PJK1 596 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 LRRD1A4D1F6 860 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 LRRC14BA6NHZ5 514 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 USP27XA6NNY8 438 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 ARHGEF33A8MVX0 844 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 DIRC3C9JPN6 131 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 APOL1O14791 398 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 LIN7AO14910 233 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-211ENST00000522802 P2RX6O15547 441 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 CRLF1O75462 422 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 SUN1O94901 812 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 AGTP01019 485 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 EPOP01588 193 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 SBK3P0C264 359 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 ERVK-10P10266 1014 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 GZMAP12544 262 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 ACVR2AP27037 513 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 APOBEC3AP31941 199 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-211ENST00000522802 MAP2K6P52564 334 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 CHN2P52757 468 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 ITGA8P53708 1063 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 DYNLT1P63172 113 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 UBXN1Q04323 297 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 KRTAP1-1Q07627 177 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 FOXE3Q13461 319 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 HADHQ16836 314 aaKnown RBP5.88□□□□□ -1.47
VPS13B-211ENST00000522802 MINDY4Q4G0A6 757 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 TEX44Q53QW1 395 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 MFSD4BQ5TF39 518 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 SHEQ5VZ18 495 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 RTL6Q6ICC9 239 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 ARHGAP11AQ6P4F7 1023 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 ZNF449Q6P9G9 518 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 PRSS41Q7RTY9 318 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 APTXQ7Z2E3 356 aaKnown RBP5.88□□□□□ -1.47
VPS13B-211ENST00000522802 CPEB2Q7Z5Q1 589 aaKnown RBP5.88□□□□□ -1.47
VPS13B-211ENST00000522802 ANKRD37Q7Z713 158 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 SERPINA9Q86WD7 417 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 SLC5A8Q8N695 610 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 CSNK1A1LQ8N752 337 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 RELL2Q8NC24 303 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-211ENST00000522802 OR2L3Q8NG85 312 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 OR2L8Q8NGY9 312 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 TMEM125Q96AQ2 219 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 DNAJC1Q96KC8 554 aaKnown RBP5.88□□□□□ -1.47
VPS13B-211ENST00000522802 LRGUKQ96M69 825 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 ERGIC2Q96RQ1 377 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 SH3GL2Q99962 352 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 TTYH2Q9BSA4 534 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 ISCUQ9H1K1 167 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 GSTO2Q9H4Y5 243 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 BEX4Q9NWD9 120 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-211ENST00000522802 PARPBPQ9NWS1 579 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 CHST2Q9Y4C5 530 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 LIPGQ9Y5X9 500 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 ALG6Q9Y672 507 aa5.88□□□□□ -1.47
VPS13B-211ENST00000522802 A0A0G2JMM0 328 aa5.87□□□□□ -1.47
VPS13B-211ENST00000522802 A0A1W2PPB8 328 aa5.87□□□□□ -1.47
VPS13B-211ENST00000522802 A0A1W2PRS3 328 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms