RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 ZNF321PQ8N8H1 164 aa9.53□□□□□ -0.88
CTNNA1-235ENST00000522730 ACOT4Q8N9L9 421 aa9.53□□□□□ -0.88
CTNNA1-235ENST00000522730 PDPRQ8NCN5 879 aa9.53□□□□□ -0.88
CTNNA1-235ENST00000522730 KCTD4Q8WVF5 259 aa9.53□□□□□ -0.88
CTNNA1-235ENST00000522730 ASB15Q8WXK1 588 aa9.53□□□□□ -0.88
CTNNA1-235ENST00000522730 UBE2E3Q969T4 207 aa9.53□□□□□ -0.88
CTNNA1-235ENST00000522730 PPWD1Q96BP3 646 aaKnown RBP9.53□□□□□ -0.88
CTNNA1-235ENST00000522730 KCNC2Q96PR1 638 aa9.53□□□□□ -0.88
CTNNA1-235ENST00000522730 PHACTR1Q9C0D0 580 aa9.53□□□□□ -0.88
CTNNA1-235ENST00000522730 PITHD1Q9GZP4 211 aaPredicted RBP9.53□□□□□ -0.88
CTNNA1-235ENST00000522730 CHST11Q9NPF2 352 aa9.53□□□□□ -0.88
CTNNA1-235ENST00000522730 ADAP2Q9NPF8 381 aa9.53□□□□□ -0.88
CTNNA1-235ENST00000522730 IGSF5Q9NSI5 407 aa9.53□□□□□ -0.88
CTNNA1-235ENST00000522730 HPF1Q9NWY4 346 aa9.53□□□□□ -0.88
CTNNA1-235ENST00000522730 NUDT4Q9NZJ9 180 aa9.53□□□□□ -0.88
CTNNA1-235ENST00000522730 ZNF223Q9UK11 482 aaPredicted RBP9.53□□□□□ -0.88
CTNNA1-235ENST00000522730 PPT2Q9UMR5 302 aa9.53□□□□□ -0.88
CTNNA1-235ENST00000522730 ZNF835Q9Y2P0 537 aa9.53□□□□□ -0.88
CTNNA1-235ENST00000522730 YARS2Q9Y2Z4 477 aaKnown RBP9.53□□□□□ -0.88
CTNNA1-235ENST00000522730 MEMO1Q9Y316 297 aa9.53□□□□□ -0.88
CTNNA1-235ENST00000522730 SPACA6W5XKT8 324 aa9.53□□□□□ -0.88
CTNNA1-235ENST00000522730 LRRC14BA6NHZ5 514 aa9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 FAM166BA8MTA8 275 aa9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 K7EPI3 171 aa9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 OR6B1O95007 311 aa9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 GFAPP14136 432 aa9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 EPB42P16452 691 aa9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 PTGS2P35354 604 aa9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 ARL1P40616 181 aaPredicted RBP9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 SSR2P43308 183 aa9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 GPR143P51810 404 aa9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 RAP1GDS1P52306 607 aa9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 PPIAP62937 165 aaKnown RBP9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 CDSNQ15517 529 aa9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 ELAVL1Q15717 326 aaKnown RBP9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 ZKSCAN8Q15776 578 aaPredicted RBP9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 TBCCQ15814 346 aa9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 PFKFB4Q16877 469 aa9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 ZNF630Q2M218 657 aaPredicted RBP9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 ADPRMQ3LIE5 342 aa9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 DMRTA1Q5VZB9 504 aa9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 ZNF793Q6ZN11 406 aa9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 BNC2Q6ZN30 1099 aaPredicted RBP9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 CEP128Q6ZU80 1094 aa9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 LRRC70Q7Z2Q7 622 aa9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 POGLUT1Q8NBL1 392 aa9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 SRFBP1Q8NEF9 429 aaKnown RBP9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 OR7G3Q8NG95 312 aa9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 ZNF473Q8WTR7 871 aaKnown RBP9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 PTPMT1Q8WUK0 201 aaPredicted RBP9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 DAZLQ92904 295 aaKnown RBP9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 MTFMTQ96DP5 389 aaKnown RBP9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 WDR34Q96EX3 536 aa9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 CMTM7Q96FZ5 175 aa9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 SEC16BQ96JE7 1060 aa9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 FMO2Q99518 471 aa9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 MTERF1Q99551 399 aaKnown RBP9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 TBCDQ9BTW9 1192 aa9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 MS4A8Q9BY19 250 aa9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 ROGDIQ9GZN7 287 aa9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 CPSF2Q9P2I0 782 aaKnown RBP9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 VTI1BQ9UEU0 232 aa9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 MTRF1LQ9UGC7 380 aaKnown RBP9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 KLF2Q9Y5W3 355 aaPredicted RBP9.52□□□□□ -0.89
CTNNA1-235ENST00000522730 PKDREJQ9NTG1 2253 aa9.51□□□□□ -0.89
CTNNA1-235ENST00000522730 SYCE1LA8MT33 242 aa9.51□□□□□ -0.89
CTNNA1-235ENST00000522730 CDK2AP1O14519 115 aa9.51□□□□□ -0.89
CTNNA1-235ENST00000522730 KERAO60938 352 aa9.51□□□□□ -0.89
CTNNA1-235ENST00000522730 ETHE1O95571 254 aa9.51□□□□□ -0.89
CTNNA1-235ENST00000522730 C1QAP02745 245 aa9.51□□□□□ -0.89
CTNNA1-235ENST00000522730 C2P06681 752 aa9.51□□□□□ -0.89
CTNNA1-235ENST00000522730 HIST1H1TP22492 207 aaPredicted RBP9.51□□□□□ -0.89
CTNNA1-235ENST00000522730 SOX3P41225 446 aa9.51□□□□□ -0.89
CTNNA1-235ENST00000522730 CASP2P42575 452 aa9.51□□□□□ -0.89
CTNNA1-235ENST00000522730 NR0B1P51843 470 aaKnown RBP9.51□□□□□ -0.89
CTNNA1-235ENST00000522730 TERF2Q15554 542 aa9.51□□□□□ -0.89
CTNNA1-235ENST00000522730 FAM83EQ2M2I3 478 aa9.51□□□□□ -0.89
CTNNA1-235ENST00000522730 TMEM35AQ53FP2 167 aa9.51□□□□□ -0.89
CTNNA1-235ENST00000522730 KHDRBS2Q5VWX1 349 aaKnown RBP9.51□□□□□ -0.89
CTNNA1-235ENST00000522730 OR4C11Q6IEV9 310 aa9.51□□□□□ -0.89
CTNNA1-235ENST00000522730 Q6ZPB1 254 aaPredicted RBP9.51□□□□□ -0.89
CTNNA1-235ENST00000522730 FGD2Q7Z6J4 655 aa9.51□□□□□ -0.89
CTNNA1-235ENST00000522730 MORN4Q8NDC4 146 aa9.51□□□□□ -0.89
CTNNA1-235ENST00000522730 OR52N2Q8NGI0 321 aa9.51□□□□□ -0.89
CTNNA1-235ENST00000522730 OR14A16Q8NHC5 309 aa9.51□□□□□ -0.89
CTNNA1-235ENST00000522730 CA5BP1Q8WTZ4 195 aa9.51□□□□□ -0.89
CTNNA1-235ENST00000522730 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.51□□□□□ -0.89
CTNNA1-235ENST00000522730 RGMAQ96B86 450 aa9.51□□□□□ -0.89
CTNNA1-235ENST00000522730 SDCCAG3Q96C92 435 aa9.51□□□□□ -0.89
CTNNA1-235ENST00000522730 DGAT2Q96PD7 388 aa9.51□□□□□ -0.89
CTNNA1-235ENST00000522730 VPS11Q9H270 941 aa9.51□□□□□ -0.89
CTNNA1-235ENST00000522730 TRIM45Q9H8W5 580 aaPredicted RBP9.51□□□□□ -0.89
CTNNA1-235ENST00000522730 ACTR8Q9H981 624 aa9.51□□□□□ -0.89
CTNNA1-235ENST00000522730 LYRM4Q9HD34 91 aa9.51□□□□□ -0.89
CTNNA1-235ENST00000522730 SNX15Q9NRS6 342 aa9.51□□□□□ -0.89
CTNNA1-235ENST00000522730 MYOTQ9UBF9 498 aa9.51□□□□□ -0.89
CTNNA1-235ENST00000522730 CLDN16Q9Y5I7 305 aa9.51□□□□□ -0.89
CTNNA1-235ENST00000522730 FBN2P35556 2912 aa9.51□□□□□ -0.89
CTNNA1-235ENST00000522730 POLQO75417 2590 aa9.51□□□□□ -0.89
CTNNA1-235ENST00000522730 GTF3C1Q12789 2109 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms