RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 SGK494L7N484 410 aa12.33□□□□□ -0.44
CPNE3-205ENST00000522240 RNASET2O00584 256 aaKnown RBP12.33□□□□□ -0.44
CPNE3-205ENST00000522240 PDPK1O15530 556 aa12.33□□□□□ -0.44
CPNE3-205ENST00000522240 HYAL3O43820 417 aaPredicted RBP12.33□□□□□ -0.44
CPNE3-205ENST00000522240 MT-CO3P00414 261 aa12.33□□□□□ -0.44
CPNE3-205ENST00000522240 NPPAP01160 153 aa12.33□□□□□ -0.44
CPNE3-205ENST00000522240 KRT16P08779 473 aa12.33□□□□□ -0.44
CPNE3-205ENST00000522240 HBQ1P09105 142 aa12.33□□□□□ -0.44
CPNE3-205ENST00000522240 LAMP1P11279 417 aa12.33□□□□□ -0.44
CPNE3-205ENST00000522240 RNH1P13489 461 aaKnown RBP12.33□□□□□ -0.44
CPNE3-205ENST00000522240 CPN2P22792 545 aa12.33□□□□□ -0.44
CPNE3-205ENST00000522240 TLX1P31314 330 aaPredicted RBP12.33□□□□□ -0.44
CPNE3-205ENST00000522240 FRKP42685 505 aaPredicted RBP12.33□□□□□ -0.44
CPNE3-205ENST00000522240 ALDH9A1P49189 494 aa12.33□□□□□ -0.44
CPNE3-205ENST00000522240 WNT3P56703 355 aa12.33□□□□□ -0.44
CPNE3-205ENST00000522240 RAB15P59190 212 aa12.33□□□□□ -0.44
CPNE3-205ENST00000522240 MXRA7P84157 204 aa12.33□□□□□ -0.44
CPNE3-205ENST00000522240 MC1RQ01726 317 aa12.33□□□□□ -0.44
CPNE3-205ENST00000522240 FOXM1Q08050 763 aa12.33□□□□□ -0.44
CPNE3-205ENST00000522240 EIF3IQ13347 325 aaKnown RBP12.33□□□□□ -0.44
CPNE3-205ENST00000522240 MAPKAPK3Q16644 382 aa12.33□□□□□ -0.44
CPNE3-205ENST00000522240 ISXQ2M1V0 245 aa12.33□□□□□ -0.44
CPNE3-205ENST00000522240 PGS1Q32NB8 556 aa12.33□□□□□ -0.44
CPNE3-205ENST00000522240 DNAL1Q4LDG9 190 aa12.33□□□□□ -0.44
CPNE3-205ENST00000522240 ZNF385BQ569K4 471 aa12.33□□□□□ -0.44
CPNE3-205ENST00000522240 DESI1Q6ICB0 168 aa12.33□□□□□ -0.44
CPNE3-205ENST00000522240 OR4F3Q6IEY1 312 aa12.33□□□□□ -0.44
CPNE3-205ENST00000522240 SLC48A1Q6P1K1 146 aa12.33□□□□□ -0.44
CPNE3-205ENST00000522240 RIPOR1Q6ZS17 1223 aa12.33□□□□□ -0.44
CPNE3-205ENST00000522240 TTLL10Q6ZVT0 673 aa12.33□□□□□ -0.44
CPNE3-205ENST00000522240 MED25Q71SY5 747 aa12.33□□□□□ -0.44
CPNE3-205ENST00000522240 SAMD14Q8IZD0 417 aaPredicted RBP12.33□□□□□ -0.44
CPNE3-205ENST00000522240 CACTIN-AS1Q8N1I8 211 aa12.33□□□□□ -0.44
CPNE3-205ENST00000522240 FAM47BQ8NA70 645 aa12.33□□□□□ -0.44
CPNE3-205ENST00000522240 RBM15BQ8NDT2 890 aaKnown RBP12.33□□□□□ -0.44
CPNE3-205ENST00000522240 VPS37AQ8NEZ2 397 aa12.33□□□□□ -0.44
CPNE3-205ENST00000522240 OR52E6Q96RD3 313 aa12.33□□□□□ -0.44
CPNE3-205ENST00000522240 NPAS2Q99743 824 aa12.33□□□□□ -0.44
CPNE3-205ENST00000522240 GID8Q9NWU2 228 aa12.33□□□□□ -0.44
CPNE3-205ENST00000522240 OCIAD1Q9NX40 245 aa12.33□□□□□ -0.44
CPNE3-205ENST00000522240 SH3BP4Q9P0V3 963 aa12.33□□□□□ -0.44
CPNE3-205ENST00000522240 BTNL2Q9UIR0 455 aa12.33□□□□□ -0.44
CPNE3-205ENST00000522240 B2RBV5 119 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 AIM2O14862 343 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 TM4SF5O14894 197 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 POLR1CO15160 346 aaPredicted RBP12.32□□□□□ -0.44
CPNE3-205ENST00000522240 CHST10O43529 356 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 SCN2BO60939 215 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 CSO75390 466 aaKnown RBP12.32□□□□□ -0.44
CPNE3-205ENST00000522240 SCRG1O75711 98 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 FTH1P19P0C7X4 201 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 ITGAXP20702 1163 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 CPOXP36551 454 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 PHC1P78364 1004 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 SHC2P98077 582 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 ACTN3Q08043 901 aaPredicted RBP12.32□□□□□ -0.44
CPNE3-205ENST00000522240 VAC14Q08AM6 782 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 ART3Q13508 389 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 CCDC157Q569K6 752 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 PAGE3Q5JUK9 113 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 HES3Q5TGS1 186 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 C18orf63Q68DL7 685 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 ANKRD26P1Q6NSI1 321 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 C8orf82Q6P1X6 216 aaPredicted RBP12.32□□□□□ -0.44
CPNE3-205ENST00000522240 DHRS13Q6UX07 377 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 C16orf89Q6UX73 402 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 RINLQ6ZS11 566 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 TMEM126BQ8IUX1 230 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 PGAM4Q8N0Y7 254 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 MMP21Q8N119 569 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 OR5T3Q8NGG3 340 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 NUDT8Q8WV74 236 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 GTF2H4Q92759 462 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 MMABQ96EY8 250 aaPredicted RBP12.32□□□□□ -0.44
CPNE3-205ENST00000522240 ITCHQ96J02 903 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 CCDC115Q96NT0 180 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 CSF3RQ99062 836 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 BTBD10Q9BSF8 475 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 TAS2R1Q9NYW7 299 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 DHCR7Q9UBM7 475 aaKnown RBP12.32□□□□□ -0.44
CPNE3-205ENST00000522240 CES1P1Q9UKY3 287 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 PSME2Q9UL46 239 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 ENTPD4Q9Y227 616 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 MRPS33Q9Y291 106 aaKnown RBP12.32□□□□□ -0.44
CPNE3-205ENST00000522240 LOXL2Q9Y4K0 774 aa12.32□□□□□ -0.44
CPNE3-205ENST00000522240 NUP210LQ5VU65 1888 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 CCDC187A0A096LP49 1063 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 A0A096LPI6 279 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 C15orf38-AP3S2A0A0A6YYH1 394 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 PRSS51A0A1B0GVH4 220 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 FXYD1O00168 92 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 CYR61O00622 381 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 CPNE3O75131 537 aaKnown RBP12.31□□□□□ -0.44
CPNE3-205ENST00000522240 ERN1O75460 977 aaKnown RBP12.31□□□□□ -0.44
CPNE3-205ENST00000522240 KCNH1O95259 989 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 CEACAM1P13688 526 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 FBLP22087 321 aaKnown RBP12.31□□□□□ -0.44
CPNE3-205ENST00000522240 IL10P22301 178 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 PPP2R1BP30154 601 aa12.31□□□□□ -0.44
CPNE3-205ENST00000522240 NTSP30990 170 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms