RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 KLF4O43474 513 aa8.08□□□□□ -1.12
TRAPPC9-212ENST00000521944 ERN1O75460 977 aaKnown RBP8.08□□□□□ -1.12
TRAPPC9-212ENST00000521944 CCNDBP1O95273 360 aa8.08□□□□□ -1.12
TRAPPC9-212ENST00000521944 P04436 131 aa8.08□□□□□ -1.12
TRAPPC9-212ENST00000521944 PGRP06401 933 aa8.08□□□□□ -1.12
TRAPPC9-212ENST00000521944 CPA2P48052 419 aa8.08□□□□□ -1.12
TRAPPC9-212ENST00000521944 ACVR1Q04771 509 aa8.08□□□□□ -1.12
TRAPPC9-212ENST00000521944 TFDP2Q14188 446 aa8.08□□□□□ -1.12
TRAPPC9-212ENST00000521944 HERC3Q15034 1050 aa8.08□□□□□ -1.12
TRAPPC9-212ENST00000521944 ZNF791Q3KP31 576 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC9-212ENST00000521944 CTSL3PQ5NE16 218 aa8.08□□□□□ -1.12
TRAPPC9-212ENST00000521944 ITPRIPL1Q6GPH6 555 aa8.08□□□□□ -1.12
TRAPPC9-212ENST00000521944 CAPN13Q6MZZ7 669 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC9-212ENST00000521944 ZNF474Q6S9Z5 364 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC9-212ENST00000521944 SH2D5Q6ZV89 423 aa8.08□□□□□ -1.12
TRAPPC9-212ENST00000521944 SYDE1Q6ZW31 735 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC9-212ENST00000521944 ZNF550Q7Z398 422 aa8.08□□□□□ -1.12
TRAPPC9-212ENST00000521944 ADGRE4PQ86SQ3 457 aa8.08□□□□□ -1.12
TRAPPC9-212ENST00000521944 SCUBE1Q8IWY4 988 aa8.08□□□□□ -1.12
TRAPPC9-212ENST00000521944 CAMKVQ8NCB2 501 aa8.08□□□□□ -1.12
TRAPPC9-212ENST00000521944 TMEM52Q8NDY8 209 aa8.08□□□□□ -1.12
TRAPPC9-212ENST00000521944 OR4L1Q8NH43 312 aa8.08□□□□□ -1.12
TRAPPC9-212ENST00000521944 MAGEC3Q8TD91 643 aa8.08□□□□□ -1.12
TRAPPC9-212ENST00000521944 G6PC3Q9BUM1 346 aa8.08□□□□□ -1.12
TRAPPC9-212ENST00000521944 SFXN3Q9BWM7 321 aa8.08□□□□□ -1.12
TRAPPC9-212ENST00000521944 PNO1Q9NRX1 252 aaKnown RBP8.08□□□□□ -1.12
TRAPPC9-212ENST00000521944 DTX4Q9Y2E6 619 aa8.08□□□□□ -1.12
TRAPPC9-212ENST00000521944 SLC6A5Q9Y345 797 aa8.08□□□□□ -1.12
TRAPPC9-212ENST00000521944 MRFAP1Q9Y605 127 aa8.08□□□□□ -1.12
TRAPPC9-212ENST00000521944 hCG_1818297A0A087WSY0 165 aa8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 LRRC14BA6NHZ5 514 aa8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 C4orf51C9J302 202 aa8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 KPNA5O15131 536 aa8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 TMCC2O75069 709 aa8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 RCBTB2O95199 551 aa8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 IGHV4-39P01824 125 aa8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 C1QAP02745 245 aa8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 THBDP07204 575 aa8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 ALOX12P18054 663 aa8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 IDUAP35475 653 aa8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 PCYT1AP49585 367 aa8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 HNRNPFP52597 415 aaKnown RBP8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 EIF3BP55884 814 aaKnown RBP8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 DEFA6Q01524 100 aa8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 KCNJ11Q14654 390 aa8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 TMED2Q15363 201 aa8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 RPS6KA1Q15418 735 aa8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 TMEM249Q2WGJ8 235 aa8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 ACSBG2Q5FVE4 666 aa8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 NHSL2Q5HYW2 709 aa8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 HECTD2Q5U5R9 776 aa8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 PRAMEF20Q5VT98 475 aa8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 IL17RELQ6ZVW7 336 aa8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 ZNF611Q8N823 705 aa8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 PAQR8Q8TEZ7 354 aa8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 INTS12Q96CB8 462 aaKnown RBP8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 ART5Q96L15 291 aa8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 BIRC8Q96P09 236 aa8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 EBNA1BP2Q99848 306 aaKnown RBP8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 UGT2B28Q9BY64 529 aa8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 AICDAQ9GZX7 198 aa8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 UBQLN3Q9H347 655 aa8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 QPCTLQ9NXS2 382 aa8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 ZNF226Q9NYT6 803 aa8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 CAMK2AQ9UQM7 478 aa8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 LAMP3Q9UQV4 416 aa8.07□□□□□ -1.12
TRAPPC9-212ENST00000521944 IGHV4-30-2A0A087WSY4 118 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 MYOCOSA0A1B0GUC4 107 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 HS3ST1O14792 307 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 TRIM3O75382 744 aaPredicted RBP8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 LRATO95237 230 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 METTL18O95568 372 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 ACSL3O95573 720 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 SOD3P08294 240 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 ZNF888P0CJ79 500 aaPredicted RBP8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 SMIM10L1P0DMW3 83 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 TNNT1P13805 278 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 SRD5A1P18405 259 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 FSTP19883 344 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 IGFBP5P24593 272 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 IMPA1P29218 277 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 UGT2B10P36537 528 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 CPOXP36551 454 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 UBE2HP62256 183 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 RNF4P78317 190 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 OCRLQ01968 901 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 PRPSAP1Q14558 356 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 ETFDHQ16134 617 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 PIGGQ5H8A4 983 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 FNDC7Q5VTL7 733 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 SLC22A10Q63ZE4 541 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 AFTPHQ6ULP2 937 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 C12orf54Q6X4T0 127 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 HSDL2Q6YN16 418 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 KIAA1328Q86T90 577 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 PM20D2Q8IYS1 436 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 GCNT2Q8N0V5 402 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 MFSD9Q8NBP5 474 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 OR52K1Q8NGK4 314 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms