RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 ATG4BQ9Y4P1 393 aa16.67■□□□□ 0.26
TRAPPC9-211ENST00000521700 CLCA3PQ9Y6N3 262 aa16.67■□□□□ 0.26
TRAPPC9-211ENST00000521700 POLEQ07864 2286 aa16.67■□□□□ 0.26
TRAPPC9-211ENST00000521700 ZGRF1Q86YA3 2104 aa16.66■□□□□ 0.26
TRAPPC9-211ENST00000521700 A0A0A6YYD5 115 aa16.66■□□□□ 0.26
TRAPPC9-211ENST00000521700 A0A1W2PPM1 405 aa16.66■□□□□ 0.26
TRAPPC9-211ENST00000521700 FOXO6A8MYZ6 492 aa16.66■□□□□ 0.26
TRAPPC9-211ENST00000521700 PROM1O43490 865 aa16.66■□□□□ 0.26
TRAPPC9-211ENST00000521700 TMPRSS11DO60235 418 aa16.66■□□□□ 0.26
TRAPPC9-211ENST00000521700 FGF17O60258 216 aa16.66■□□□□ 0.26
TRAPPC9-211ENST00000521700 PRKNO60260 465 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC9-211ENST00000521700 DLX3O60479 287 aa16.66■□□□□ 0.26
TRAPPC9-211ENST00000521700 RNF224P0DH78 156 aa16.66■□□□□ 0.26
TRAPPC9-211ENST00000521700 CD46P15529 392 aa16.66■□□□□ 0.26
TRAPPC9-211ENST00000521700 TNNI3P19429 210 aa16.66■□□□□ 0.26
TRAPPC9-211ENST00000521700 TAC1P20366 129 aa16.66■□□□□ 0.26
TRAPPC9-211ENST00000521700 HSD17B3P37058 310 aa16.66■□□□□ 0.26
TRAPPC9-211ENST00000521700 TDGF1P3P51864 188 aa16.66■□□□□ 0.26
TRAPPC9-211ENST00000521700 PMP22Q01453 160 aa16.66■□□□□ 0.26
TRAPPC9-211ENST00000521700 SERTAD2Q14140 314 aa16.66■□□□□ 0.26
TRAPPC9-211ENST00000521700 GGTA1PQ4G0N0 100 aa16.66■□□□□ 0.26
TRAPPC9-211ENST00000521700 UNC50Q53HI1 259 aa16.66■□□□□ 0.26
TRAPPC9-211ENST00000521700 TTC19Q6DKK2 380 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC9-211ENST00000521700 MRM1Q6IN84 353 aaKnown RBP16.66■□□□□ 0.26
TRAPPC9-211ENST00000521700 ZNF227Q86WZ6 799 aa16.66■□□□□ 0.26
TRAPPC9-211ENST00000521700 DNAJB8Q8NHS0 232 aa16.66■□□□□ 0.26
TRAPPC9-211ENST00000521700 UBLCP1Q8WVY7 318 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC9-211ENST00000521700 DAZLQ92904 295 aaKnown RBP16.66■□□□□ 0.26
TRAPPC9-211ENST00000521700 SERPINI1Q99574 410 aa16.66■□□□□ 0.26
TRAPPC9-211ENST00000521700 RPF2Q9H7B2 306 aaKnown RBP16.66■□□□□ 0.26
TRAPPC9-211ENST00000521700 TRIM45Q9H8W5 580 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC9-211ENST00000521700 PHF11Q9UIL8 331 aa16.66■□□□□ 0.26
TRAPPC9-211ENST00000521700 ERRFI1Q9UJM3 462 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC9-211ENST00000521700 ZNF225Q9UK10 706 aa16.66■□□□□ 0.26
TRAPPC9-211ENST00000521700 ASB4Q9Y574 426 aa16.66■□□□□ 0.26
TRAPPC9-211ENST00000521700 COL12A1Q99715 3063 aa16.66■□□□□ 0.26
TRAPPC9-211ENST00000521700 WASHC1A8K0Z3 465 aa16.65■□□□□ 0.26
TRAPPC9-211ENST00000521700 PRKRAO75569 313 aaKnown RBP16.65■□□□□ 0.26
TRAPPC9-211ENST00000521700 ZFAND5O76080 213 aa16.65■□□□□ 0.26
TRAPPC9-211ENST00000521700 OTCP00480 354 aa16.65■□□□□ 0.26
TRAPPC9-211ENST00000521700 CRYABP02511 175 aaKnown RBP16.65■□□□□ 0.26
TRAPPC9-211ENST00000521700 SP1P08047 785 aa16.65■□□□□ 0.26
TRAPPC9-211ENST00000521700 MST1P26927 711 aa16.65■□□□□ 0.26
TRAPPC9-211ENST00000521700 TRHRP34981 398 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC9-211ENST00000521700 CYB561P49447 251 aa16.65■□□□□ 0.26
TRAPPC9-211ENST00000521700 HLCSP50747 726 aa16.65■□□□□ 0.26
TRAPPC9-211ENST00000521700 HERVK_113P63132 956 aa16.65■□□□□ 0.26
TRAPPC9-211ENST00000521700 IGLV3-21P80748 117 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC9-211ENST00000521700 TNFRSF17Q02223 184 aa16.65■□□□□ 0.26
TRAPPC9-211ENST00000521700 CLCQ05315 142 aa16.65■□□□□ 0.26
TRAPPC9-211ENST00000521700 SGO1Q5FBB7 561 aa16.65■□□□□ 0.26
TRAPPC9-211ENST00000521700 ZNF678Q5SXM1 525 aa16.65■□□□□ 0.26
TRAPPC9-211ENST00000521700 SLC25A25Q6KCM7 469 aa16.65■□□□□ 0.26
TRAPPC9-211ENST00000521700 LETMD1Q6P1Q0 360 aa16.65■□□□□ 0.26
TRAPPC9-211ENST00000521700 SH2D5Q6ZV89 423 aa16.65■□□□□ 0.26
TRAPPC9-211ENST00000521700 CNPY4Q8N129 248 aa16.65■□□□□ 0.26
TRAPPC9-211ENST00000521700 HORMAD2Q8N7B1 307 aa16.65■□□□□ 0.26
TRAPPC9-211ENST00000521700 ZNF321PQ8N8H1 164 aa16.65■□□□□ 0.26
TRAPPC9-211ENST00000521700 MORN4Q8NDC4 146 aa16.65■□□□□ 0.26
TRAPPC9-211ENST00000521700 TRPC4APQ8TEL6 797 aa16.65■□□□□ 0.26
TRAPPC9-211ENST00000521700 SSC4DQ8WTU2 575 aa16.65■□□□□ 0.26
TRAPPC9-211ENST00000521700 TANKQ92844 425 aa16.65■□□□□ 0.26
TRAPPC9-211ENST00000521700 C5orf34Q96MH7 638 aa16.65■□□□□ 0.26
TRAPPC9-211ENST00000521700 ERVK-6Q9BXR3 956 aa16.65■□□□□ 0.26
TRAPPC9-211ENST00000521700 ANKZF1Q9H8Y5 726 aa16.65■□□□□ 0.26
TRAPPC9-211ENST00000521700 LYARQ9NX58 379 aaKnown RBP16.65■□□□□ 0.26
TRAPPC9-211ENST00000521700 A0A1W2PR48 441 aa16.64■□□□□ 0.25
TRAPPC9-211ENST00000521700 TMEM200CA6NKL6 621 aa16.64■□□□□ 0.25
TRAPPC9-211ENST00000521700 C17orf105B2RV13 164 aa16.64■□□□□ 0.25
TRAPPC9-211ENST00000521700 FCHO1O14526 889 aa16.64■□□□□ 0.25
TRAPPC9-211ENST00000521700 WISP2O76076 250 aa16.64■□□□□ 0.25
TRAPPC9-211ENST00000521700 SUPT7LO94864 414 aa16.64■□□□□ 0.25
TRAPPC9-211ENST00000521700 SEMA3DO95025 777 aa16.64■□□□□ 0.25
TRAPPC9-211ENST00000521700 DDAH2O95865 285 aa16.64■□□□□ 0.25
TRAPPC9-211ENST00000521700 GBAP04062 536 aa16.64■□□□□ 0.25
TRAPPC9-211ENST00000521700 GSTA1P08263 222 aa16.64■□□□□ 0.25
TRAPPC9-211ENST00000521700 FAM58BPP0C7Q3 252 aa16.64■□□□□ 0.25
TRAPPC9-211ENST00000521700 IMPDH1P20839 514 aa16.64■□□□□ 0.25
TRAPPC9-211ENST00000521700 ATP5F1P24539 256 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC9-211ENST00000521700 TLX1P31314 330 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC9-211ENST00000521700 SLCO1A2P46721 670 aa16.64■□□□□ 0.25
TRAPPC9-211ENST00000521700 FOLH1Q04609 750 aa16.64■□□□□ 0.25
TRAPPC9-211ENST00000521700 IFT88Q13099 833 aa16.64■□□□□ 0.25
TRAPPC9-211ENST00000521700 C10orf62Q5T681 223 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC9-211ENST00000521700 FAM219BQ5XKK7 198 aa16.64■□□□□ 0.25
TRAPPC9-211ENST00000521700 CYP20A1Q6UW02 462 aa16.64■□□□□ 0.25
TRAPPC9-211ENST00000521700 C16orf47Q6ZP98 133 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC9-211ENST00000521700 GALNTL5Q7Z4T8 443 aa16.64■□□□□ 0.25
TRAPPC9-211ENST00000521700 NUDT13Q86X67 352 aa16.64■□□□□ 0.25
TRAPPC9-211ENST00000521700 TMEM178AQ8NBL3 297 aa16.64■□□□□ 0.25
TRAPPC9-211ENST00000521700 C7orf57Q8NEG2 295 aa16.64■□□□□ 0.25
TRAPPC9-211ENST00000521700 MYRIPQ8NFW9 859 aa16.64■□□□□ 0.25
TRAPPC9-211ENST00000521700 OR14A16Q8NHC5 309 aa16.64■□□□□ 0.25
TRAPPC9-211ENST00000521700 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.64■□□□□ 0.253e-6■■■■■ 50.2
TRAPPC9-211ENST00000521700 UCN3Q969E3 161 aa16.64■□□□□ 0.25
TRAPPC9-211ENST00000521700 TMEM237Q96Q45 408 aa16.64■□□□□ 0.25
TRAPPC9-211ENST00000521700 OR8D2Q9GZM6 311 aa16.64■□□□□ 0.25
TRAPPC9-211ENST00000521700 ELOVL6Q9H5J4 265 aa16.64■□□□□ 0.25
TRAPPC9-211ENST00000521700 LIN28AQ9H9Z2 209 aaKnown RBP16.64■□□□□ 0.25
TRAPPC9-211ENST00000521700 FARSBQ9NSD9 589 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms