RNA–Protein interactions for RNA: ENST00000520776.5

EFCAB13-208, Transcript of EF-hand calcium binding domain 13, human

TSL 2

Gene EFCAB13, Length 1,979 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFCAB13-208	ENST00000520776	TPBGL	P0DKB5	382 aa		3.03	□□□□□ -1.92
EFCAB13-208	ENST00000520776	SELE	P16581	610 aa		3.03	□□□□□ -1.92
EFCAB13-208	ENST00000520776	FUT1	P19526	365 aa		3.03	□□□□□ -1.92
EFCAB13-208	ENST00000520776	MARCKS	P29966	332 aa	Predicted RBP	3.03	□□□□□ -1.92
EFCAB13-208	ENST00000520776	FHIT	P49789	147 aa		3.03	□□□□□ -1.92
EFCAB13-208	ENST00000520776	CCL11	P51671	97 aa		3.03	□□□□□ -1.92
EFCAB13-208	ENST00000520776	LIMK2	P53671	638 aa		3.03	□□□□□ -1.92
EFCAB13-208	ENST00000520776	SST	P61278	116 aa		3.03	□□□□□ -1.92
EFCAB13-208	ENST00000520776	SNRPD1	P62314	119 aa	Known RBP	3.03	□□□□□ -1.92
EFCAB13-208	ENST00000520776	RIG	Q13278	110 aa		3.03	□□□□□ -1.92
EFCAB13-208	ENST00000520776	DRP2	Q13474	957 aa		3.03	□□□□□ -1.92
EFCAB13-208	ENST00000520776	KARS	Q15046	597 aa	Known RBP	3.03	□□□□□ -1.92
EFCAB13-208	ENST00000520776	GSG1L	Q6UXU4	331 aa		3.03	□□□□□ -1.92
EFCAB13-208	ENST00000520776	CHMP1B	Q7LBR1	199 aa		3.03	□□□□□ -1.92
EFCAB13-208	ENST00000520776	C17orf64	Q86WR6	236 aa		3.03	□□□□□ -1.92
EFCAB13-208	ENST00000520776	ERC1	Q8IUD2	1116 aa		3.03	□□□□□ -1.92
EFCAB13-208	ENST00000520776	OR5M9	Q8NGP3	310 aa		3.03	□□□□□ -1.92
EFCAB13-208	ENST00000520776	RPLP0P6	Q8NHW5	317 aa		3.03	□□□□□ -1.92
EFCAB13-208	ENST00000520776	FUNDC2	Q9BWH2	189 aa		3.03	□□□□□ -1.92
EFCAB13-208	ENST00000520776	WWP1	Q9H0M0	922 aa		3.03	□□□□□ -1.92
EFCAB13-208	ENST00000520776	WDR13	Q9H1Z4	485 aa		3.03	□□□□□ -1.92
EFCAB13-208	ENST00000520776	MTHFD2L	Q9H903	347 aa	Predicted RBP	3.03	□□□□□ -1.92
EFCAB13-208	ENST00000520776	LIN28A	Q9H9Z2	209 aa	Known RBP	3.03	□□□□□ -1.92
EFCAB13-208	ENST00000520776	NARF	Q9UHQ1	456 aa		3.03	□□□□□ -1.92
EFCAB13-208	ENST00000520776	MRPS28	Q9Y2Q9	187 aa	Known RBP	3.03	□□□□□ -1.92
EFCAB13-208	ENST00000520776	CSNK1G3	Q9Y6M4	447 aa		3.03	□□□□□ -1.92
EFCAB13-208	ENST00000520776	KIF7	Q2M1P5	1343 aa		3.03	□□□□□ -1.93
EFCAB13-208	ENST00000520776	YJEFN3	A6XGL0	299 aa		3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776		A8MU76	341 aa		3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776	TCP10L2	B9ZVM9	353 aa		3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776	TRIM16	O95361	564 aa		3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776	DNAJB1	P25685	340 aa		3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776	PRDX6	P30041	224 aa		3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776	GPR183	P32249	361 aa		3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776	HSPA14	Q0VDF9	509 aa		3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776	SPP2	Q13103	211 aa		3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776	CEBPE	Q15744	281 aa		3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776	SGSM1	Q2NKQ1	1148 aa		3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776	HLA-B	Q31612	363 aa		3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776	GPAT3	Q53EU6	434 aa		3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776	MPPE1	Q53F39	396 aa		3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776	CMPK2	Q5EBM0	449 aa		3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776	C12orf60	Q5U649	245 aa		3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776	CES4A	Q5XG92	561 aa		3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776		Q71RC1	249 aa	Predicted RBP	3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776	BNIPL	Q7Z465	357 aa		3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776	OR4N5	Q8IXE1	308 aa		3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776	TEX9	Q8N6V9	391 aa		3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776	LEMD2	Q8NC56	503 aa		3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776	ANKRD20A12P	Q8NF67	263 aa		3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776	OR6M1	Q8NGM8	313 aa		3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776	ATP8B4	Q8TF62	1192 aa		3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776	FBXO17	Q96EF6	278 aa		3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776	C14orf79	Q96F83	325 aa		3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776	RPGRIP1	Q96KN7	1286 aa		3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776	FTHL17	Q9BXU8	183 aa		3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776	FGF22	Q9HCT0	170 aa		3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776	MED17	Q9NVC6	651 aa		3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776	EPS15L1	Q9UBC2	864 aa		3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776	MRTO4	Q9UKD2	239 aa	Known RBP	3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776	GAB2	Q9UQC2	676 aa		3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776	MRPS18C	Q9Y3D5	142 aa	Known RBP	3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776	ZMYM6	O95789	1325 aa		3.02	□□□□□ -1.93
EFCAB13-208	ENST00000520776		G3V2L1	256 aa		3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776		K7EPI3	171 aa		3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776	ADAM12	O43184	909 aa		3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776	SSX5	O60225	188 aa		3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776	CS	O75390	466 aa	Known RBP	3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776	CSDE1	O75534	798 aa	Known RBP	3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776	OR6A2	O95222	327 aa		3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776	RPLP0	P05388	317 aa	Known RBP	3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776	CHRNA3	P32297	505 aa		3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776	TSFM	P43897	325 aa	Known RBP	3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776	ASMT	P46597	345 aa		3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776	GEM	P55040	296 aa		3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776	NLRP11	P59045	1033 aa	Known RBP	3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776	POLR2F	P61218	127 aa	Known RBP	3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776	TMEM187	Q14656	261 aa		3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776	EXOSC7	Q15024	291 aa	Known RBP	3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776	FAM189A2	Q15884	450 aa		3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776	TMEM30B	Q3MIR4	351 aa		3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776	LIPJ	Q5W064	366 aa		3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776	HIST2H2AA3	Q6FI13	130 aa		3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776	KRTAP5-4	Q6L8H1	288 aa		3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776	UNC5D	Q6UXZ4	953 aa		3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776	CDHR3	Q6ZTQ4	885 aa		3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776	TMEM26	Q6ZUK4	368 aa		3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776	ITIH5	Q86UX2	942 aa		3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776	LIPH	Q8WWY8	451 aa		3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776	SLCO2A1	Q92959	643 aa		3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776	CNRIP1	Q96F85	164 aa	Predicted RBP	3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776	KRT12	Q99456	494 aa		3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776	CBWD1	Q9BRT8	395 aa		3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776	EGLN1	Q9GZT9	426 aa		3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776	ATG10	Q9H0Y0	220 aa		3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776	NGB	Q9NPG2	151 aa		3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776	HOMER3	Q9NSC5	361 aa		3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776	KLHL8	Q9P2G9	620 aa	Predicted RBP	3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776	KLK11	Q9UBX7	282 aa		3.01	□□□□□ -1.93
EFCAB13-208	ENST00000520776	CLIP2	Q9UDT6	1046 aa		3.01	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms