RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 GTPBP2Q9BX10 602 aaKnown RBP2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 THAP2Q9H0W7 228 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 SDCBP2Q9H190 292 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 LZTFL1Q9NQ48 299 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 BARHL2Q9NY43 387 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 EPHA6Q9UF33 1036 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 FAM153AQ9UHL3 310 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 BARX2Q9UMQ3 279 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 WDR37Q9Y2I8 494 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 PYGO1Q9Y3Y4 419 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 SAR1BQ9Y6B6 198 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 BZW2Q9Y6E2 419 aaKnown RBP2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 LRP6O75581 1613 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 PAPPAQ13219 1627 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 A0A1B0GUL6 1792 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 RGPD5Q99666 1765 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 A0A087X002 238 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 HTR3EA5X5Y0 456 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 LAD1O00515 517 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 ZNF263O14978 683 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 WDR46O15213 610 aaKnown RBP2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 POLR2DO15514 142 aaKnown RBP2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 ARHGEF9O43307 516 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 PEX11AO75192 247 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 E2F6O75461 281 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 IDH1O75874 414 aaKnown RBP2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 DDHD2O94830 711 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 SIX3O95343 332 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 MOCS3O95396 460 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 KRT14P02533 472 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 GSTA2P09210 222 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 TPBGLP0DKB5 382 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 SLC2A2P11168 524 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 NQO1P15559 274 aaKnown RBP2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 ACADSP16219 412 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 EPORP19235 508 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 TYMPP19971 482 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 LHCGRP22888 699 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 HNRNPH3P31942 346 aaKnown RBP2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 LONP1P36776 959 aaKnown RBP2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 GP5P40197 560 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 CETN2P41208 172 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 RANBP1P43487 201 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 NOVP48745 357 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 VEGFCP49767 419 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 RGS7P49802 495 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 CAPZA1P52907 286 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 MFAP3P55082 362 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 MTCP1P56278 107 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 KCNJ2P63252 427 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 SP3Q02447 781 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 CACNG1Q06432 222 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 CKAP4Q07065 602 aaKnown RBP2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 SPAG1Q07617 926 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 RASGEF1BQ0VAM2 473 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 SGCGQ13326 291 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 DYNC1I2Q13409 638 aaKnown RBP2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 PNOCQ13519 176 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 TMEM187Q14656 261 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 OPCMLQ14982 345 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 NONOQ15233 471 aaKnown RBP eCLIP2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 RBBP7Q16576 425 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 KRT71Q3SY84 523 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 ZC2HC1BQ5TFG8 222 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 LYSMD4Q5XG99 296 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 IRGCQ6NXR0 463 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 BHLHB9Q6PI77 547 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 IL27RAQ6UWB1 636 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 Q6ZSR9 355 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 C15orf52Q6ZUT6 534 aaKnown RBP2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 IL17RELQ6ZVW7 336 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 DNAJB7Q7Z6W7 309 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 PHLDB2Q86SQ0 1253 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 LCA5Q86VQ0 697 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 AMIGO1Q86WK6 493 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 METTL23Q86XA0 190 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 HOGA1Q86XE5 327 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 VSIG1Q86XK7 387 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 LACC1Q8IV20 430 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 DCLK2Q8N568 766 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 FAM89BQ8N5H3 189 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 SLC37A3Q8NCC5 494 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 SPATA4Q8NEY3 305 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 Q8NFD4 153 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 OR7A2PQ8NGA2 310 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 SLC26A7Q8TE54 656 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 C17orf50Q8WW18 174 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 SEPT1Q8WYJ6 367 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 TSACCQ96A04 125 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 FAM162AQ96A26 154 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 OPTNQ96CV9 577 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 TBC1D31Q96DN5 1066 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 SPATA17Q96L03 361 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 GDAP1L1Q96MZ0 367 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 IWS1Q96ST2 819 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 KRT12Q99456 494 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 NDNQ99608 321 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 OPRPNQ99935 248 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 KATNB1Q9BVA0 655 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 FAM129AQ9BZQ8 928 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms