RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 KIF2BQ8N4N8 673 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 RNF10Q8N5U6 811 aaKnown RBP4.51□□□□□ -1.69
SDCBP-207ENST00000520168 TMEM251Q8N6I4 163 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 TEX9Q8N6V9 391 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 APCDD1LQ8NCL9 501 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 NAXEQ8NCW5 288 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 OR9A1PQ8NGU1 263 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 OR6P1Q8NGX9 317 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 TMEM171Q8WVE6 324 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 SKA2Q8WVK7 121 aaPredicted RBP4.51□□□□□ -1.69
SDCBP-207ENST00000520168 CTNNBL1Q8WYA6 563 aaPredicted RBP4.51□□□□□ -1.69
SDCBP-207ENST00000520168 PEX13Q92968 403 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 TBC1D20Q96BZ9 403 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 HAUS1Q96CS2 278 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 PEX11GQ96HA9 241 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 AARSD1Q9BTE6 412 aaKnown RBP4.51□□□□□ -1.69
SDCBP-207ENST00000520168 C19orf24Q9BVV8 132 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 ACAT2Q9BWD1 397 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 KRTAP4-9Q9BYQ8 210 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 LANCL2Q9NS86 450 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 SACM1LQ9NTJ5 587 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 DEPPQ9NTK1 212 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 ARGLU1Q9NWB6 273 aaPredicted RBP4.51□□□□□ -1.69
SDCBP-207ENST00000520168 TMEM160Q9NX00 188 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 ALKBH4Q9NXW9 302 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 KCMF1Q9P0J7 381 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 LPAR3Q9UBY5 353 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 CIDEBQ9UHD4 219 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 TAC3Q9UHF0 121 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 FBXW2Q9UKT8 454 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 GUCA1BQ9UMX6 200 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 PPIEQ9UNP9 301 aaKnown RBP4.51□□□□□ -1.69
SDCBP-207ENST00000520168 DRG1Q9Y295 367 aaKnown RBP4.51□□□□□ -1.69
SDCBP-207ENST00000520168 JRKLQ9Y4A0 524 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 LIPGQ9Y5X9 500 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 KIAA1549Q9HCM3 1950 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 TRBV11-1A0A0K0K1C0 115 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 FAM95CA0A1B0GW59 222 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 ATP6AP2A0A1C7CYW4 349 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 MBD3L3A6NE82 208 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-207ENST00000520168 MROH6A6NGR9 719 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 CD8B2A6NJW9 211 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 A8MV72 311 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-207ENST00000520168 BTNL10A8MVZ5 291 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 EEF1E1-BLOC1S5C9J1V9 151 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 APOC4-APOC2K7ER74 178 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 SGK494L7N484 410 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 MYO1CO00159 1063 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 CCL22O00626 93 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 PRMT5O14744 637 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-207ENST00000520168 HAT1O14929 419 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 EEF1E1O43324 174 aaKnown RBP4.5□□□□□ -1.69
SDCBP-207ENST00000520168 OR1I1O60431 355 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 AVILO75366 819 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 RDH16O75452 317 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 ATP6AP2O75787 350 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 ZFAND5O76080 213 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 MATN4O95460 622 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 GAS8O95995 478 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 APOC2P02655 101 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 CATP04040 527 aaKnown RBP4.5□□□□□ -1.69
SDCBP-207ENST00000520168 RPLP1P05386 114 aaKnown RBP4.5□□□□□ -1.69
SDCBP-207ENST00000520168 PRSS56P0CW18 603 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 IL1RNP18510 177 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 ATF4P18848 351 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-207ENST00000520168 CTNNA2P26232 953 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 PSMB4P28070 264 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 GRK3P35626 688 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 MC3RP41968 323 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 CDKN2BP42772 138 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 SLC1A1P43005 524 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 MAGEA1P43355 309 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 BDKRB1P46663 353 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 CPA2P48052 419 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 TTPAP49638 278 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 ZNF136P52737 540 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 PNLIPRP1P54315 467 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 DIO3P55073 304 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 CKAP4Q07065 602 aaKnown RBP4.5□□□□□ -1.69
SDCBP-207ENST00000520168 KRT72Q14CN4 511 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 ASTE1Q2TB18 679 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-207ENST00000520168 KRTAP24-1Q3LI83 254 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 ACSF3Q4G176 576 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-207ENST00000520168 FASTKD1Q53R41 847 aaKnown RBP4.5□□□□□ -1.69
SDCBP-207ENST00000520168 FAM182AQ5T1J6 154 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 NSUN5P2Q63ZY6 315 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 DENND5AQ6IQ26 1287 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 POMZP3Q6PJE2 187 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 IL20RBQ6UXL0 311 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 FAM47EQ6ZV65 393 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 PLEKHM3Q6ZWE6 761 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 ABHD13Q7L211 337 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 PRSS41Q7RTY9 318 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 DND1Q8IYX4 353 aaKnown RBP4.5□□□□□ -1.69
SDCBP-207ENST00000520168 AMER2Q8N7J2 671 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 NFAM1Q8NET5 270 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-207ENST00000520168 TNIP2Q8NFZ5 429 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 TRIM58Q8NG06 486 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 MBD3L2Q8NHZ7 208 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-207ENST00000520168 PPP1R14CQ8TAE6 165 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms