RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 C3orf14Q9HBI5 128 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 ANKMY1Q9P2S6 941 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 NPC1L1Q9UHC9 1359 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 LNPEPQ9UIQ6 1025 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 TMCC3Q9ULS5 477 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 DIMT1Q9UNQ2 313 aaKnown RBP4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 PLCL2Q9UPR0 1127 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 NCAPD2Q15021 1401 aa4.58□□□□□ -1.68
HMGB1P46-201ENST00000520062 ZNF195O14628 629 aa4.58□□□□□ -1.68
HMGB1P46-201ENST00000520062 SIGLEC5O15389 551 aa4.58□□□□□ -1.68
HMGB1P46-201ENST00000520062 EZRP15311 586 aaKnown RBP4.58□□□□□ -1.68
HMGB1P46-201ENST00000520062 FUT1P19526 365 aa4.58□□□□□ -1.68
HMGB1P46-201ENST00000520062 GABPB1Q06547 395 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P46-201ENST00000520062 PDZK1IP1Q13113 114 aa4.58□□□□□ -1.68
HMGB1P46-201ENST00000520062 HNRNPDQ14103 355 aaKnown RBP4.58□□□□□ -1.68
HMGB1P46-201ENST00000520062 SGSM1Q2NKQ1 1148 aa4.58□□□□□ -1.68
HMGB1P46-201ENST00000520062 CMPK2Q5EBM0 449 aa4.58□□□□□ -1.68
HMGB1P46-201ENST00000520062 RTL6Q6ICC9 239 aa4.58□□□□□ -1.68
HMGB1P46-201ENST00000520062 CDC42EP5Q6NZY7 148 aa4.58□□□□□ -1.68
HMGB1P46-201ENST00000520062 ARSKQ6UWY0 536 aa4.58□□□□□ -1.68
HMGB1P46-201ENST00000520062 C18orf65Q6ZTR6 163 aa4.58□□□□□ -1.68
HMGB1P46-201ENST00000520062 CHMP1BQ7LBR1 199 aa4.58□□□□□ -1.68
HMGB1P46-201ENST00000520062 PTAR1Q7Z6K3 402 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P46-201ENST00000520062 ADGRD2Q7Z7M1 963 aa4.58□□□□□ -1.68
HMGB1P46-201ENST00000520062 YRDCQ86U90 279 aaKnown RBP4.58□□□□□ -1.68
HMGB1P46-201ENST00000520062 LMNTD2Q8IXW0 634 aa4.58□□□□□ -1.68
HMGB1P46-201ENST00000520062 MRGPRDQ8TDS7 321 aa4.58□□□□□ -1.68
HMGB1P46-201ENST00000520062 C16orf58Q96GQ5 468 aa4.58□□□□□ -1.68
HMGB1P46-201ENST00000520062 CXorf58Q96LI9 332 aa4.58□□□□□ -1.68
HMGB1P46-201ENST00000520062 F2RL3Q96RI0 385 aa4.58□□□□□ -1.68
HMGB1P46-201ENST00000520062 RAB40CQ96S21 281 aa4.58□□□□□ -1.68
HMGB1P46-201ENST00000520062 NODALQ96S42 347 aa4.58□□□□□ -1.68
HMGB1P46-201ENST00000520062 KRT12Q99456 494 aa4.58□□□□□ -1.68
HMGB1P46-201ENST00000520062 DCTN5Q9BTE1 182 aa4.58□□□□□ -1.68
HMGB1P46-201ENST00000520062 PINK1Q9BXM7 581 aa4.58□□□□□ -1.68
HMGB1P46-201ENST00000520062 CCSER1Q9C0I3 900 aa4.58□□□□□ -1.68
HMGB1P46-201ENST00000520062 NACA2Q9H009 215 aa4.58□□□□□ -1.68
HMGB1P46-201ENST00000520062 DPH5Q9H2P9 285 aa4.58□□□□□ -1.68
HMGB1P46-201ENST00000520062 ERVK-18Q9QC07 812 aa4.58□□□□□ -1.68
HMGB1P46-201ENST00000520062 CLIP2Q9UDT6 1046 aa4.58□□□□□ -1.68
HMGB1P46-201ENST00000520062 IL20RAQ9UHF4 553 aa4.58□□□□□ -1.68
HMGB1P46-201ENST00000520062 WIPI2Q9Y4P8 454 aa4.58□□□□□ -1.68
HMGB1P46-201ENST00000520062 CLDN3O15551 220 aa4.57□□□□□ -1.68
HMGB1P46-201ENST00000520062 GRID2O43424 1007 aa4.57□□□□□ -1.68
HMGB1P46-201ENST00000520062 KRT86O43790 486 aa4.57□□□□□ -1.68
HMGB1P46-201ENST00000520062 KIAA0513O60268 411 aa4.57□□□□□ -1.68
HMGB1P46-201ENST00000520062 MTRF1O75570 445 aaKnown RBP4.57□□□□□ -1.68
HMGB1P46-201ENST00000520062 GNSP15586 552 aa4.57□□□□□ -1.68
HMGB1P46-201ENST00000520062 PRDX6P30041 224 aa4.57□□□□□ -1.68
HMGB1P46-201ENST00000520062 HSPA1LP34931 641 aa4.57□□□□□ -1.68
HMGB1P46-201ENST00000520062 MDH1P40925 334 aaKnown RBP4.57□□□□□ -1.68
HMGB1P46-201ENST00000520062 MAGEA4P43358 317 aa4.57□□□□□ -1.68
HMGB1P46-201ENST00000520062 LIMK2P53671 638 aa4.57□□□□□ -1.68
HMGB1P46-201ENST00000520062 BTG1P62324 171 aa4.57□□□□□ -1.68
HMGB1P46-201ENST00000520062 MYBPC1Q00872 1141 aa4.57□□□□□ -1.68
HMGB1P46-201ENST00000520062 KLHL30Q0D2K2 578 aa4.57□□□□□ -1.68
HMGB1P46-201ENST00000520062 NME3Q13232 169 aa4.57□□□□□ -1.68
HMGB1P46-201ENST00000520062 KRT81Q14533 505 aa4.57□□□□□ -1.68
HMGB1P46-201ENST00000520062 WSCD2Q2TBF2 565 aa4.57□□□□□ -1.68
HMGB1P46-201ENST00000520062 MCM10Q7L590 875 aa4.57□□□□□ -1.68
HMGB1P46-201ENST00000520062 BNIPLQ7Z465 357 aa4.57□□□□□ -1.68
HMGB1P46-201ENST00000520062 ZER1Q7Z7L7 766 aa4.57□□□□□ -1.68
HMGB1P46-201ENST00000520062 DDHD1Q8NEL9 900 aa4.57□□□□□ -1.68
HMGB1P46-201ENST00000520062 RPLP0P6Q8NHW5 317 aa4.57□□□□□ -1.68
HMGB1P46-201ENST00000520062 P3H4Q92791 437 aa4.57□□□□□ -1.68
HMGB1P46-201ENST00000520062 ZNF486Q96H40 463 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P46-201ENST00000520062 GMPPAQ96IJ6 420 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P46-201ENST00000520062 MAGED4Q96JG8 741 aa4.57□□□□□ -1.68
HMGB1P46-201ENST00000520062 OVOL2Q9BRP0 275 aa4.57□□□□□ -1.68
HMGB1P46-201ENST00000520062 UBE2TQ9NPD8 197 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P46-201ENST00000520062 KLHL8Q9P2G9 620 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P46-201ENST00000520062 ICAM5Q9UMF0 924 aa4.57□□□□□ -1.68
HMGB1P46-201ENST00000520062 PPP1R3CQ9UQK1 317 aa4.57□□□□□ -1.68
HMGB1P46-201ENST00000520062 ENTPD4Q9Y227 616 aa4.57□□□□□ -1.68
HMGB1P46-201ENST00000520062 ZHX2Q9Y6X8 837 aa4.57□□□□□ -1.68
HMGB1P46-201ENST00000520062 ZMYM6O95789 1325 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 SHISA7A6NL88 538 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 ANHXE9PGG2 379 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 IFNB1P01574 187 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 IGHEP01854 428 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 KRT6BP04259 564 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 PROS1P07225 676 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 LYNP07948 512 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 GP9P14770 177 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 ACADSBP45954 432 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 KRT6CP48668 564 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 ZNF131P52739 623 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 HSD17B7P56937 341 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 NLRP11P59045 1033 aaKnown RBP4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 GNB1P62873 340 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 CYCSP99999 105 aaKnown RBP4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 RIGQ13278 110 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 ZNF876PQ49A33 203 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 ARHGAP17Q68EM7 881 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 AFTPHQ6ULP2 937 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 CWC27Q6UX04 472 aaKnown RBP4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 Q6ZSR9 355 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 TMEM26Q6ZUK4 368 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 ITIH5Q86UX2 942 aa4.56□□□□□ -1.68
HMGB1P46-201ENST00000520062 OR4N5Q8IXE1 308 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms