RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 ST3GAL2Q16842 350 aa12.96□□□□□ -0.34
PABPC1-208ENST00000519004 DGKKQ5KSL6 1271 aa12.96□□□□□ -0.34
PABPC1-208ENST00000519004 MANEALQ5VSG8 457 aa12.96□□□□□ -0.34
PABPC1-208ENST00000519004 MRNIPQ6NTE8 343 aa12.96□□□□□ -0.34
PABPC1-208ENST00000519004 GPSM1Q86YR5 675 aa12.96□□□□□ -0.34
PABPC1-208ENST00000519004 GPR21Q99679 349 aa12.96□□□□□ -0.34
PABPC1-208ENST00000519004 NMUR1Q9HB89 426 aa12.96□□□□□ -0.34
PABPC1-208ENST00000519004 ASIC5Q9NY37 505 aa12.96□□□□□ -0.34
PABPC1-208ENST00000519004 TAS2R13Q9NYV9 303 aa12.96□□□□□ -0.34
PABPC1-208ENST00000519004 ZMYM5Q9UJ78 669 aa12.96□□□□□ -0.34
PABPC1-208ENST00000519004 ADAMDEC1O15204 470 aa12.95□□□□□ -0.34
PABPC1-208ENST00000519004 GATCO43716 136 aaKnown RBP12.95□□□□□ -0.34
PABPC1-208ENST00000519004 ECDO95905 644 aaPredicted RBP12.95□□□□□ -0.34
PABPC1-208ENST00000519004 GLUD1P00367 558 aa12.95□□□□□ -0.34
PABPC1-208ENST00000519004 POU2F1P14859 743 aa12.95□□□□□ -0.34
PABPC1-208ENST00000519004 CXCL2P19875 107 aa12.95□□□□□ -0.34
PABPC1-208ENST00000519004 STC1P52823 247 aa12.95□□□□□ -0.34
PABPC1-208ENST00000519004 TSPAN5P62079 268 aa12.95□□□□□ -0.34
PABPC1-208ENST00000519004 ACVR1Q04771 509 aa12.95□□□□□ -0.34
PABPC1-208ENST00000519004 NTRK2Q16620 822 aa12.95□□□□□ -0.34
PABPC1-208ENST00000519004 ZNF528Q3MIS6 628 aa12.95□□□□□ -0.34
PABPC1-208ENST00000519004 FAM198BQ6UWH4 519 aa12.95□□□□□ -0.34
PABPC1-208ENST00000519004 QSOX2Q6ZRP7 698 aa12.95□□□□□ -0.34
PABPC1-208ENST00000519004 SHFQ7M4L6 423 aa12.95□□□□□ -0.34
PABPC1-208ENST00000519004 GPR65Q8IYL9 337 aa12.95□□□□□ -0.34
PABPC1-208ENST00000519004 SLC6A18Q96N87 628 aa12.95□□□□□ -0.34
PABPC1-208ENST00000519004 IL4I1Q96RQ9 567 aa12.95□□□□□ -0.34
PABPC1-208ENST00000519004 SPATA2Q9UM82 520 aa12.95□□□□□ -0.34
PABPC1-208ENST00000519004 SF3B6Q9Y3B4 125 aaKnown RBP12.95□□□□□ -0.34
PABPC1-208ENST00000519004 RAI2Q9Y5P3 530 aa12.95□□□□□ -0.34
PABPC1-208ENST00000519004 YJEFN3A6XGL0 299 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 RFXANKO14593 260 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 ST8SIA5O15466 376 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 ACAA1P09110 424 aaPredicted RBP12.94□□□□□ -0.34
PABPC1-208ENST00000519004 BCKDHAP12694 445 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 CCR1P32246 355 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 MMP12P39900 470 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 SELENOPP49908 381 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 CLDN8P56748 225 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 FKBP1AP62942 108 aaKnown RBP12.94□□□□□ -0.34
PABPC1-208ENST00000519004 C1DQ13901 141 aaKnown RBP12.94□□□□□ -0.34
PABPC1-208ENST00000519004 SPOUT1Q5T280 376 aaKnown RBP12.94□□□□□ -0.34
PABPC1-208ENST00000519004 RNLSQ5VYX0 342 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 TRMT11Q7Z4G4 463 aaKnown RBP12.94□□□□□ -0.34
PABPC1-208ENST00000519004 WDR20Q8TBZ3 569 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 PIH1D2Q8WWB5 315 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 SGK3Q96BR1 496 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 SLC25A51Q9H1U9 297 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 LRTM1Q9HBL6 345 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 DNAJC27Q9NZQ0 273 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 PPT2Q9UMR5 302 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 NUBP2Q9Y5Y2 271 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 MRPL42Q9Y6G3 142 aaKnown RBP12.94□□□□□ -0.34
PABPC1-208ENST00000519004 ALPK3Q96L96 1907 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 CLDN5O00501 218 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 FFAR3O14843 346 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 GPR42O15529 346 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 SGCEO43556 437 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 EIF1BO60739 113 aaKnown RBP12.94□□□□□ -0.34
PABPC1-208ENST00000519004 NCR1O76036 304 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 HMBSP08397 361 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 ENGP17813 658 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 EIF1P41567 113 aaKnown RBP12.94□□□□□ -0.34
PABPC1-208ENST00000519004 CDH12P55289 794 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 SSTP61278 116 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 SPIBQ01892 262 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 TSC22D1Q15714 1073 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 Q3ZCU0 254 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 PLK5Q496M5 336 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 ZER1Q7Z7L7 766 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 OR6S1Q8NH40 331 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 OR1S1Q8NH92 325 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 GTPBP3Q969Y2 492 aaKnown RBP12.94□□□□□ -0.34
PABPC1-208ENST00000519004 PGAP3Q96FM1 320 aaPredicted RBP12.94□□□□□ -0.34
PABPC1-208ENST00000519004 DDOQ99489 341 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 MAPKAP1Q9BPZ7 522 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 TREX2Q9BQ50 279 aaPredicted RBP12.94□□□□□ -0.34
PABPC1-208ENST00000519004 NKX6-2Q9C056 277 aaPredicted RBP12.94□□□□□ -0.34
PABPC1-208ENST00000519004 DPAGT1Q9H3H5 408 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 WDCPQ9H6R7 721 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 SLC6A5Q9Y345 797 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 GBF1Q92538 1859 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 NYNRINQ9P2P1 1898 aaKnown RBP12.94□□□□□ -0.34
PABPC1-208ENST00000519004 OTOFQ9HC10 1997 aa12.94□□□□□ -0.34
PABPC1-208ENST00000519004 PMS2P1A4D2B8 440 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 CLIC1O00299 241 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 GNB5O14775 395 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 ONECUT3O60422 494 aaPredicted RBP12.93□□□□□ -0.34
PABPC1-208ENST00000519004 EIF3GO75821 320 aaKnown RBP eCLIP12.93□□□□□ -0.34
PABPC1-208ENST00000519004 TCRBP04435 133 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 HIST1H2AGP0C0S8 130 aaPredicted RBP12.93□□□□□ -0.34
PABPC1-208ENST00000519004 TNFRSF1BP20333 461 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 HIST1H2ADP20671 130 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 OGNP20774 298 aaKnown RBP12.93□□□□□ -0.34
PABPC1-208ENST00000519004 HSD17B2P37059 387 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 CD86P42081 329 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 GSTM5P46439 218 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 DHODHQ02127 395 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 SP140Q13342 867 aa12.93□□□□□ -0.34
PABPC1-208ENST00000519004 GTF2H2Q13888 395 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms