RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 LANCL2Q9NS86 450 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 TEX10Q9NXF1 929 aaPredicted RBP11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 HCN3Q9P1Z3 774 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 TRPC4Q9UBN4 977 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 ATP6V1HQ9UI12 483 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 CES1P1Q9UKY3 287 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 EXO1Q9UQ84 846 aaKnown RBP11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 PCDHGA6Q9Y5G7 932 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 C9J4A7 227 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 PSMD12O00232 456 aaPredicted RBP11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 NDUFAB1O14561 156 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 SCAMP2O15127 329 aaKnown RBP11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 RAD1O60671 282 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 AIFM1O95831 613 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 FHP07954 510 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 IL3P08700 152 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 FURINP09958 794 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 LIPCP11150 499 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 GPX3P22352 226 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 CPN2P22792 545 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 XCR1P46094 333 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 STX1BP61266 288 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 OLR1P78380 273 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 MAT1AQ00266 395 aaKnown RBP11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 OCA2Q04671 838 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 NCF4Q15080 339 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 CEBPEQ15744 281 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 NKG7Q16617 165 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 TBC1D25Q3MII6 688 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 FAM91A1Q658Y4 838 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 SLC48A1Q6P1K1 146 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 QSOX2Q6ZRP7 698 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 SCUBE1Q8IWY4 988 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 SAMD14Q8IZD0 417 aaPredicted RBP11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 EFCAB3Q8N7B9 438 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 DNAJB14Q8TBM8 379 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 STT3BQ8TCJ2 826 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 TSPEARQ8WU66 669 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 MR1Q95460 341 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 NKD1Q969G9 470 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 NACC2Q96BF6 587 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 COQ8BQ96D53 544 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 TSSK3Q96PN8 268 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 MYLK2Q9H1R3 596 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 CHST8Q9H2A9 424 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 CLMPQ9H6B4 373 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 REEP4Q9H6H4 257 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 RPF2Q9H7B2 306 aaKnown RBP11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 SAR1AQ9NR31 198 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 IFT80Q9P2H3 777 aaPredicted RBP11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 HEY2Q9UBP5 337 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 BAIAP2L1Q9UHR4 511 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 FBXW2Q9UKT8 454 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 COPG1Q9Y678 874 aaKnown RBP11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 MAU2Q9Y6X3 613 aa11.28□□□□□ -0.6
PDLIM5-220ENST00000514830 WDFY3Q8IZQ1 3526 aa11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 IGKV3D-11A0A0A0MRZ8 115 aa11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 DYTNA2CJ06 578 aa11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 CLDN4O14493 209 aa11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 CTNSO60931 367 aa11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 SLC22A3O75751 556 aa11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 KLF7O75840 302 aaPredicted RBP11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 DCTN3O75935 186 aa11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 RECKO95980 971 aa11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 ZGLP1P0C6A0 271 aa11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 HPCAL1P37235 193 aa11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 FRKP42685 505 aaPredicted RBP11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 ZFP36L2P47974 494 aaKnown RBP11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 RHAGQ02094 409 aa11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 SRSF11Q05519 484 aaKnown RBP11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 C2orf80Q0P641 193 aa11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 RPS6KA2Q15349 733 aa11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 SYT16Q17RD7 645 aa11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 CPZQ66K79 652 aa11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 C18orf63Q68DL7 685 aa11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 LCN10Q6JVE6 187 aa11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 METTL27Q8N6F8 245 aaPredicted RBP11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 CCDC197Q8NCU1 140 aa11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 PLPP5Q8NEB5 264 aa11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 OR8J2Q8NGG1 315 aa11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 OR2Y1Q8NGV0 311 aa11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 MIEF2Q96C03 454 aa11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 PEX11GQ96HA9 241 aa11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 CATSPER2Q96P56 530 aa11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 CSF3RQ99062 836 aa11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 SPSB2Q99619 263 aa11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 PRPF18Q99633 342 aaKnown RBP11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 DPY30Q9C005 99 aa11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 AKIRIN1Q9H9L7 192 aaPredicted RBP11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 CTSFQ9UBX1 484 aa11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 GPN3Q9UHW5 284 aaPredicted RBP11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 PSME2Q9UL46 239 aa11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 PADI2Q9Y2J8 665 aa11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 CLDN16Q9Y5I7 305 aa11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 AK5Q9Y6K8 562 aa11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 FRYQ5TBA9 3013 aa11.27□□□□□ -0.61
PDLIM5-220ENST00000514830 TEX51A0A1B0GUA7 166 aa11.26□□□□□ -0.61
PDLIM5-220ENST00000514830 A0A1W2PQ72 361 aa11.26□□□□□ -0.61
PDLIM5-220ENST00000514830 FAM234BA2RU67 622 aa11.26□□□□□ -0.61
PDLIM5-220ENST00000514830 GABRR3A8MPY1 467 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms