RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 LOXP28300 417 aaPredicted RBP10.26□□□□□ -0.77
RNF4-218ENST00000513284 OPRM1P35372 400 aa10.26□□□□□ -0.77
RNF4-218ENST00000513284 SOX18P35713 384 aa10.26□□□□□ -0.77
RNF4-218ENST00000513284 SLCO1A2P46721 670 aa10.26□□□□□ -0.77
RNF4-218ENST00000513284 KCNJ1P48048 391 aa10.26□□□□□ -0.77
RNF4-218ENST00000513284 PTH2RP49190 550 aa10.26□□□□□ -0.77
RNF4-218ENST00000513284 CCR8P51685 355 aa10.26□□□□□ -0.77
RNF4-218ENST00000513284 RNF4P78317 190 aa10.26□□□□□ -0.77
RNF4-218ENST00000513284 TIAL1Q01085 375 aaKnown RBP eCLIP10.26□□□□□ -0.77
RNF4-218ENST00000513284 GPS1Q13098 491 aa10.26□□□□□ -0.77
RNF4-218ENST00000513284 TNK1Q13470 666 aa10.26□□□□□ -0.77
RNF4-218ENST00000513284 BMPR2Q13873 1038 aa10.26□□□□□ -0.77
RNF4-218ENST00000513284 PIGGQ5H8A4 983 aa10.26□□□□□ -0.77
RNF4-218ENST00000513284 NIPAL1Q6NVV3 410 aa10.26□□□□□ -0.77
RNF4-218ENST00000513284 ZNF662Q6ZS27 426 aa10.26□□□□□ -0.77
RNF4-218ENST00000513284 RASGEF1CQ8N431 466 aa10.26□□□□□ -0.77
RNF4-218ENST00000513284 C9orf106Q8NAJ2 232 aa10.26□□□□□ -0.77
RNF4-218ENST00000513284 MBD3L2Q8NHZ7 208 aaPredicted RBP10.26□□□□□ -0.77
RNF4-218ENST00000513284 PAQR8Q8TEZ7 354 aa10.26□□□□□ -0.77
RNF4-218ENST00000513284 PYCR2Q96C36 320 aa10.26□□□□□ -0.77
RNF4-218ENST00000513284 DOCK7Q96N67 2140 aa10.26□□□□□ -0.77
RNF4-218ENST00000513284 NAP1L3Q99457 506 aaPredicted RBP10.26□□□□□ -0.77
RNF4-218ENST00000513284 PIGQQ9BRB3 760 aa10.26□□□□□ -0.77
RNF4-218ENST00000513284 RBM24Q9BX46 236 aaKnown RBP10.26□□□□□ -0.77
RNF4-218ENST00000513284 GSX2Q9BZM3 304 aa10.26□□□□□ -0.77
RNF4-218ENST00000513284 PRDM14Q9GZV8 571 aa10.26□□□□□ -0.77
RNF4-218ENST00000513284 ADAP2Q9NPF8 381 aa10.26□□□□□ -0.77
RNF4-218ENST00000513284 PRTFDC1Q9NRG1 225 aa10.26□□□□□ -0.77
RNF4-218ENST00000513284 ZFP69BQ9UJL9 534 aa10.26□□□□□ -0.77
RNF4-218ENST00000513284 WIF1Q9Y5W5 379 aa10.26□□□□□ -0.77
RNF4-218ENST00000513284 RAI1Q7Z5J4 1906 aaPredicted RBP10.26□□□□□ -0.77
RNF4-218ENST00000513284 HEATR5AQ86XA9 2040 aa10.26□□□□□ -0.77
RNF4-218ENST00000513284 USF3Q68DE3 2245 aa10.25□□□□□ -0.77
RNF4-218ENST00000513284 ABCA1O95477 2261 aa10.25□□□□□ -0.77
RNF4-218ENST00000513284 CES2O00748 559 aa10.25□□□□□ -0.77
RNF4-218ENST00000513284 PHF1O43189 567 aaPredicted RBP10.25□□□□□ -0.77
RNF4-218ENST00000513284 CTIFO43310 598 aaKnown RBP10.25□□□□□ -0.77
RNF4-218ENST00000513284 KRT14P02533 472 aa10.25□□□□□ -0.77
RNF4-218ENST00000513284 C1QAP02745 245 aa10.25□□□□□ -0.77
RNF4-218ENST00000513284 HIST1H2AGP0C0S8 130 aaPredicted RBP10.25□□□□□ -0.77
RNF4-218ENST00000513284 HIST1H2ADP20671 130 aa10.25□□□□□ -0.77
RNF4-218ENST00000513284 MAGEA6P43360 314 aa10.25□□□□□ -0.77
RNF4-218ENST00000513284 VPS41P49754 854 aa10.25□□□□□ -0.77
RNF4-218ENST00000513284 NR1H2P55055 460 aa10.25□□□□□ -0.77
RNF4-218ENST00000513284 HSD17B7P56937 341 aa10.25□□□□□ -0.77
RNF4-218ENST00000513284 PRAMEF20Q5VT98 475 aa10.25□□□□□ -0.77
RNF4-218ENST00000513284 SLC22A10Q63ZE4 541 aa10.25□□□□□ -0.77
RNF4-218ENST00000513284 VASNQ6EMK4 673 aa10.25□□□□□ -0.77
RNF4-218ENST00000513284 OPN5Q6U736 354 aa10.25□□□□□ -0.77
RNF4-218ENST00000513284 LUZP2Q86TE4 346 aa10.25□□□□□ -0.77
RNF4-218ENST00000513284 CPNE9Q8IYJ1 553 aa10.25□□□□□ -0.77
RNF4-218ENST00000513284 TMEM132CQ8N3T6 1108 aa10.25□□□□□ -0.77
RNF4-218ENST00000513284 TBC1D19Q8N5T2 526 aa10.25□□□□□ -0.77
RNF4-218ENST00000513284 MCUQ8NE86 351 aa10.25□□□□□ -0.77
RNF4-218ENST00000513284 CD200R1Q8TD46 325 aa10.25□□□□□ -0.77
RNF4-218ENST00000513284 SLC44A1Q8WWI5 657 aa10.25□□□□□ -0.77
RNF4-218ENST00000513284 SNF8Q96H20 258 aa10.25□□□□□ -0.77
RNF4-218ENST00000513284 WDYHV1Q96HA8 205 aa10.25□□□□□ -0.77
RNF4-218ENST00000513284 HIST1H2AHQ96KK5 128 aa10.25□□□□□ -0.77
RNF4-218ENST00000513284 MARK4Q96L34 752 aa10.25□□□□□ -0.77
RNF4-218ENST00000513284 WFIKKN1Q96NZ8 548 aa10.25□□□□□ -0.77
RNF4-218ENST00000513284 HS3ST6Q96QI5 342 aa10.25□□□□□ -0.77
RNF4-218ENST00000513284 CCL19Q99731 98 aa10.25□□□□□ -0.77
RNF4-218ENST00000513284 HIST1H2AJQ99878 128 aa10.25□□□□□ -0.77
RNF4-218ENST00000513284 FAM167BQ9BTA0 163 aa10.25□□□□□ -0.77
RNF4-218ENST00000513284 H2AFJQ9BTM1 129 aa10.25□□□□□ -0.77
RNF4-218ENST00000513284 LZTFL1Q9NQ48 299 aa10.25□□□□□ -0.77
RNF4-218ENST00000513284 QPCTLQ9NXS2 382 aa10.25□□□□□ -0.77
RNF4-218ENST00000513284 VTI1BQ9UEU0 232 aa10.25□□□□□ -0.77
RNF4-218ENST00000513284 TRMT6Q9UJA5 497 aaKnown RBP10.25□□□□□ -0.77
RNF4-218ENST00000513284 TESMINQ9Y4I5 508 aa10.25□□□□□ -0.77
RNF4-218ENST00000513284 C15orf38-AP3S2A0A0A6YYH1 394 aa10.24□□□□□ -0.77
RNF4-218ENST00000513284 A8MXE2 369 aa10.24□□□□□ -0.77
RNF4-218ENST00000513284 CYR61O00622 381 aa10.24□□□□□ -0.77
RNF4-218ENST00000513284 CASKO14936 926 aa10.24□□□□□ -0.77
RNF4-218ENST00000513284 ETHE1O95571 254 aa10.24□□□□□ -0.77
RNF4-218ENST00000513284 ACSL3O95573 720 aa10.24□□□□□ -0.77
RNF4-218ENST00000513284 C8GP07360 202 aa10.24□□□□□ -0.77
RNF4-218ENST00000513284 PAX1P15863 534 aa10.24□□□□□ -0.77
RNF4-218ENST00000513284 AHRP35869 848 aa10.24□□□□□ -0.77
RNF4-218ENST00000513284 TERF1P54274 439 aa10.24□□□□□ -0.77
RNF4-218ENST00000513284 BTN3A2P78410 334 aa10.24□□□□□ -0.77
RNF4-218ENST00000513284 RGS1Q08116 209 aa10.24□□□□□ -0.77
RNF4-218ENST00000513284 ASPHQ12797 758 aa10.24□□□□□ -0.77
RNF4-218ENST00000513284 SP140Q13342 867 aa10.24□□□□□ -0.77
RNF4-218ENST00000513284 TRIP13Q15645 432 aaPredicted RBP10.24□□□□□ -0.77
RNF4-218ENST00000513284 ELAVL1Q15717 326 aaKnown RBP10.24□□□□□ -0.77
RNF4-218ENST00000513284 PHKG1Q16816 387 aa10.24□□□□□ -0.77
RNF4-218ENST00000513284 KCTD19Q17RG1 926 aaPredicted RBP10.24□□□□□ -0.77
RNF4-218ENST00000513284 MPEG1Q2M385 716 aa10.24□□□□□ -0.77
RNF4-218ENST00000513284 KRTAP24-1Q3LI83 254 aa10.24□□□□□ -0.77
RNF4-218ENST00000513284 DCST1Q5T197 706 aa10.24□□□□□ -0.77
RNF4-218ENST00000513284 C10orf62Q5T681 223 aaPredicted RBP10.24□□□□□ -0.77
RNF4-218ENST00000513284 PLXDC2Q6UX71 529 aa10.24□□□□□ -0.77
RNF4-218ENST00000513284 C22orf34Q6ZV56 151 aa10.24□□□□□ -0.77
RNF4-218ENST00000513284 CLNKQ7Z7G1 428 aa10.24□□□□□ -0.77
RNF4-218ENST00000513284 LRRC8AQ8IWT6 810 aa10.24□□□□□ -0.77
RNF4-218ENST00000513284 MYO1HQ8N1T3 1032 aa10.24□□□□□ -0.77
RNF4-218ENST00000513284 GPATCH11Q8N954 259 aa10.24□□□□□ -0.77
RNF4-218ENST00000513284 MORN4Q8NDC4 146 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms