RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 SUPT3HB4E1H0 165 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 K7EPI3 171 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 RTCAO00442 366 aaKnown RBP13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 KERAO60938 352 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 SUPT3HO75486 399 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 PDE9AO76083 593 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 PCNAP12004 261 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 COX7A2P14406 83 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 POU3F2P20265 443 aaPredicted RBP13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 CHRNB4P30926 498 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 STX2P32856 288 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 PPIAP62937 165 aaKnown RBP13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 CAV1Q03135 178 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 PCDH1Q08174 1060 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 AP5B1Q2VPB7 878 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 NDUFAF5Q5TEU4 345 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 RTL4Q6ZR62 310 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 CEP128Q6ZU80 1094 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 CMC1Q7Z7K0 106 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 SLC22A16Q86VW1 577 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 PPM1NQ8N819 430 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 ZNF321PQ8N8H1 164 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 OR7G3Q8NG95 312 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 CHTF18Q8WVB6 975 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 CMTM7Q96FZ5 175 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 SCYL1Q96KG9 808 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 SGCZQ96LD1 299 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 ATOH8Q96SQ7 321 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 TREX2Q9BQ50 279 aaPredicted RBP13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 FAM173AQ9BQD7 235 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 TTTY12Q9BZ98 90 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 DEFB127Q9H1M4 99 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 NMRAL1Q9HBL8 299 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 MS4A12Q9NXJ0 267 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 OPTCQ9UBM4 332 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 COPS7AQ9UBW8 275 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 PYCARDQ9ULZ3 195 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 UTP11Q9Y3A2 253 aaKnown RBP13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 HRH3Q9Y5N1 445 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 TEP1Q99973 2627 aaKnown RBP13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 ZNF407Q9C0G0 2248 aa13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 A0A0G2JMM0 328 aa13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 A0A1W2PPB8 328 aa13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 A0A1W2PRS3 328 aa13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 OR14I1A6ND48 311 aa13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 KIR3DP1A8MWS1 328 aa13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 UBXN8O00124 270 aa13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 FAM155BO75949 473 aa13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 GLSO94925 669 aaPredicted RBP13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 ETHE1O95571 254 aa13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 TGFB1P01137 390 aa13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 LTA4HP09960 611 aaKnown RBP13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 CAPN3P20807 821 aa13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 CNR1P21554 472 aa13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 CPN2P22792 545 aa13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 CRABP2P29373 138 aa13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 GMPRP36959 345 aa13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 ID2Q02363 134 aa13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 C2orf54Q08AI8 447 aa13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 DLG1Q12959 904 aa13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 NAB1Q13506 487 aa13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 KHDRBS2Q5VWX1 349 aaKnown RBP13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 GRHL2Q6ISB3 625 aa13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 OPN5Q6U736 354 aa13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 MEX3BQ6ZN04 569 aaKnown RBP13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 FBXO25Q8TCJ0 367 aa13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 ZNF721Q8TF20 911 aa13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 SREK1Q8WXA9 508 aaKnown RBP13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 ANP32BQ92688 251 aaKnown RBP13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 RND1Q92730 232 aa13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 ANKRD9Q96BM1 317 aaPredicted RBP13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 CENPKQ9BS16 269 aa13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 ADGRE2Q9UHX3 823 aa13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 CELSR1Q9NYQ6 3014 aa13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 AKAP9Q99996 3911 aa13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 POLQO75417 2590 aa13.62□□□□□ -0.23
CCHCR1-229ENST00000512418 CCDC168Q8NDH2 2452 aa13.61□□□□□ -0.23
CCHCR1-229ENST00000512418 SYCE1LA8MT33 242 aa13.61□□□□□ -0.23
CCHCR1-229ENST00000512418 G3V3Y1 287 aa13.61□□□□□ -0.23
CCHCR1-229ENST00000512418 SAP18O00422 153 aaKnown RBP13.61□□□□□ -0.23
CCHCR1-229ENST00000512418 DYRK3O43781 588 aa13.61□□□□□ -0.23
CCHCR1-229ENST00000512418 FGF17O60258 216 aa13.61□□□□□ -0.23
CCHCR1-229ENST00000512418 SH3BGRLO75368 114 aa13.61□□□□□ -0.23
CCHCR1-229ENST00000512418 EPB42P16452 691 aa13.61□□□□□ -0.23
CCHCR1-229ENST00000512418 STT3AP46977 705 aa13.61□□□□□ -0.23
CCHCR1-229ENST00000512418 NR0B1P51843 470 aaKnown RBP13.61□□□□□ -0.23
CCHCR1-229ENST00000512418 PLTPP55058 493 aa13.61□□□□□ -0.23
CCHCR1-229ENST00000512418 IGLV3-21P80748 117 aaPredicted RBP13.61□□□□□ -0.23
CCHCR1-229ENST00000512418 TLE4Q04727 773 aa13.61□□□□□ -0.23
CCHCR1-229ENST00000512418 SLAMF1Q13291 335 aa13.61□□□□□ -0.23
CCHCR1-229ENST00000512418 MPEG1Q2M385 716 aa13.61□□□□□ -0.23
CCHCR1-229ENST00000512418 ZNF750Q32MQ0 723 aa13.61□□□□□ -0.23
CCHCR1-229ENST00000512418 EMC4Q5J8M3 183 aa13.61□□□□□ -0.23
CCHCR1-229ENST00000512418 DEPDC1Q5TB30 811 aa13.61□□□□□ -0.23
CCHCR1-229ENST00000512418 OR4C11Q6IEV9 310 aa13.61□□□□□ -0.23
CCHCR1-229ENST00000512418 FAM47EQ6ZV65 393 aa13.61□□□□□ -0.23
CCHCR1-229ENST00000512418 CCDC91Q7Z6B0 441 aa13.61□□□□□ -0.23
CCHCR1-229ENST00000512418 CCDC25Q86WR0 208 aa13.61□□□□□ -0.23
CCHCR1-229ENST00000512418 FAM109AQ8N4B1 249 aa13.61□□□□□ -0.23
CCHCR1-229ENST00000512418 LILRB4Q8NHJ6 448 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms