RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 UBE2HP62256 183 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 SNRPD1P62314 119 aaKnown RBP3.43□□□□□ -1.86
CAST-229ENST00000510098 MYL7Q01449 175 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 CACNG1Q06432 222 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 SLC34A1Q06495 639 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 HNRNPDQ14103 355 aaKnown RBP3.43□□□□□ -1.86
CAST-229ENST00000510098 TEAD2Q15562 447 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 RBBP7Q16576 425 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 LDLRAP1Q5SW96 308 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 PRAMEF7Q5VXH5 474 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 UGT3A1Q6NUS8 523 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 FBXL22Q6P050 247 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 METAP1DQ6UB28 335 aaPredicted RBP3.43□□□□□ -1.86
CAST-229ENST00000510098 TMEM207Q6UWW9 146 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 MEX3DQ86XN8 651 aaKnown RBP3.43□□□□□ -1.86
CAST-229ENST00000510098 IQCF2Q8IXL9 164 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 CENPLQ8N0S6 344 aaPredicted RBP3.43□□□□□ -1.86
CAST-229ENST00000510098 RAB42Q8N4Z0 105 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 FADS6Q8N9I5 356 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 ZNF248Q8NDW4 579 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 DDHD1Q8NEL9 900 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 SLC26A7Q8TE54 656 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 DQX1Q8TE96 717 aaKnown RBP3.43□□□□□ -1.86
CAST-229ENST00000510098 U2AF1L4Q8WU68 220 aaKnown RBP3.43□□□□□ -1.86
CAST-229ENST00000510098 FAM46BQ96A09 425 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 LGALS12Q96DT0 336 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 C16orf58Q96GQ5 468 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 C4orf45Q96LM5 186 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 MAP3K3Q99759 626 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 C17orf62Q9BQA9 187 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 EDEM2Q9BV94 578 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 IDI2Q9BXS1 227 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 NACAP1Q9BZK3 213 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 NMNAT2Q9BZQ4 307 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 VCX2Q9H322 139 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 TMEM231Q9H6L2 316 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 ZNF696Q9H7X3 374 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 YY1AP1Q9H869 796 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 VAT1LQ9HCJ6 419 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 SCRT2Q9NQ03 307 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 ZNF71Q9NQZ8 489 aaPredicted RBP3.43□□□□□ -1.86
CAST-229ENST00000510098 HOMER3Q9NSC5 361 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 PIGVQ9NUD9 493 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 PANK4Q9NVE7 773 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 GDAP2Q9NXN4 497 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 PKD2L2Q9NZM6 624 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 CNOT2Q9NZN8 540 aaKnown RBP3.43□□□□□ -1.86
CAST-229ENST00000510098 C6orf203Q9P0P8 240 aaPredicted RBP3.43□□□□□ -1.86
CAST-229ENST00000510098 EPHA6Q9UF33 1036 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 TRAF3IP3Q9Y228 551 aa3.43□□□□□ -1.86
CAST-229ENST00000510098 A0A087WW49 117 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 TMEM129A0AVI4 362 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 H0YIG0 161 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 M0QX08 132 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 SLC28A1O00337 649 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 FPGTO14772 594 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 ZG16O60844 167 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 TOM1L1O75674 476 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 SURF6O75683 361 aaKnown RBP3.42□□□□□ -1.86
CAST-229ENST00000510098 GAS8O95995 478 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 RAF1P04049 648 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 RHOXF2BP0C7M4 288 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 ELAVL4P26378 380 aaKnown RBP3.42□□□□□ -1.86
CAST-229ENST00000510098 MARCKSP29966 332 aaPredicted RBP3.42□□□□□ -1.86
CAST-229ENST00000510098 NKX2-1P43699 371 aaPredicted RBP3.42□□□□□ -1.86
CAST-229ENST00000510098 NSFP46459 744 aaKnown RBP3.42□□□□□ -1.86
CAST-229ENST00000510098 DNA2P51530 1060 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 ATP12AP54707 1039 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 GNB1P62873 340 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 TNFRSF17Q02223 184 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 HSF2Q03933 536 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 PDIA5Q14554 519 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 OPCMLQ14982 345 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 CARTPTQ16568 116 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 ACKR1Q16570 336 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 PDK4Q16654 411 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 USH1GQ495M9 461 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 CFAP221Q4G0U5 840 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 XKR6Q5GH73 641 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 LYSMD4Q5XG99 296 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 PRSS55Q6UWB4 352 aaPredicted RBP3.42□□□□□ -1.86
CAST-229ENST00000510098 ASPGQ86U10 573 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 LUZP1Q86V48 1076 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 ZDHHC21Q8IVQ6 265 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 MISPQ8IVT2 679 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 LRRC43Q8N309 656 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 WDSUB1Q8N9V3 476 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 SLC37A3Q8NCC5 494 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 OR7A2PQ8NGA2 310 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 OR52K1Q8NGK4 314 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 TMEM190Q8WZ59 177 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 FCGR1BQ92637 280 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 FBXO32Q969P5 355 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 PIWIL1Q96J94 861 aaKnown RBP3.42□□□□□ -1.86
CAST-229ENST00000510098 MAGED4Q96JG8 741 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 PRAC1Q96KF2 57 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 RASL10BQ96S79 203 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 SECISBP2Q96T21 854 aaKnown RBP3.42□□□□□ -1.86
CAST-229ENST00000510098 RHOXF2Q9BQY4 288 aa3.42□□□□□ -1.86
CAST-229ENST00000510098 TBC1D10AQ9BXI6 508 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms