RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 SLC22A10Q63ZE4 541 aa8.65□□□□□ -1.02
NEDD9-211ENST00000508546 ADGRD1Q6QNK2 874 aa8.65□□□□□ -1.02
NEDD9-211ENST00000508546 PAQR3Q6TCH7 311 aa8.65□□□□□ -1.02
NEDD9-211ENST00000508546 CAPN12Q6ZSI9 719 aa8.65□□□□□ -1.02
NEDD9-211ENST00000508546 LRRC25Q8N386 305 aaPredicted RBP8.65□□□□□ -1.02
NEDD9-211ENST00000508546 TMEM52Q8NDY8 209 aa8.65□□□□□ -1.02
NEDD9-211ENST00000508546 TNIP2Q8NFZ5 429 aa8.65□□□□□ -1.02
NEDD9-211ENST00000508546 OR5L2Q8NGL0 311 aa8.65□□□□□ -1.02
NEDD9-211ENST00000508546 OR14A16Q8NHC5 309 aa8.65□□□□□ -1.02
NEDD9-211ENST00000508546 PTPMT1Q8WUK0 201 aaPredicted RBP8.65□□□□□ -1.02
NEDD9-211ENST00000508546 FAR2Q96K12 515 aa8.65□□□□□ -1.02
NEDD9-211ENST00000508546 PIP5K1AQ99755 562 aa8.65□□□□□ -1.02
NEDD9-211ENST00000508546 TRIM54Q9BYV2 358 aa8.65□□□□□ -1.02
NEDD9-211ENST00000508546 ZFP64Q9NPA5 681 aa8.65□□□□□ -1.02
NEDD9-211ENST00000508546 TRMT1Q9NXH9 659 aaKnown RBP8.65□□□□□ -1.02
NEDD9-211ENST00000508546 TRPS1Q9UHF7 1281 aa8.65□□□□□ -1.02
NEDD9-211ENST00000508546 BOKQ9UMX3 212 aaPredicted RBP8.65□□□□□ -1.02
NEDD9-211ENST00000508546 MAD1L1Q9Y6D9 718 aa8.65□□□□□ -1.02
NEDD9-211ENST00000508546 CAPN6Q9Y6Q1 641 aa8.65□□□□□ -1.02
NEDD9-211ENST00000508546 ROS1P08922 2347 aa8.65□□□□□ -1.03
NEDD9-211ENST00000508546 RAI1Q7Z5J4 1906 aaPredicted RBP8.64□□□□□ -1.03
NEDD9-211ENST00000508546 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.64□□□□□ -1.03
NEDD9-211ENST00000508546 A0A088AWK7 358 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 A0A1W2PPR1 153 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 SDR42E2A6NKP2 422 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 HAX1O00165 279 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 CYR61O00622 381 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 CTNSO60931 367 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 IFNA16P05015 189 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 RFPL3SP0C7P2 107 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 ZNF10P21506 573 aaPredicted RBP8.64□□□□□ -1.03
NEDD9-211ENST00000508546 PIGAP37287 484 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 EFTUD2Q15029 972 aaKnown RBP eCLIP8.64□□□□□ -1.03
NEDD9-211ENST00000508546 RBBP5Q15291 538 aaKnown RBP8.64□□□□□ -1.03
NEDD9-211ENST00000508546 SF3B4Q15427 424 aaKnown RBP eCLIP8.64□□□□□ -1.03
NEDD9-211ENST00000508546 PIGGQ5H8A4 983 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 Q5PR19 223 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 NXPE4Q6UWF7 544 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 PRSS57Q6UWY2 283 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 GSTA5Q7RTV2 222 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 TMPRSS11BQ86T26 416 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 TXLNBQ8N3L3 684 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 TTLQ8NG68 377 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 LINC01560Q8TB33 94 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 SLC2A12Q8TD20 617 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 PAQR8Q8TEZ7 354 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 SMPDL3BQ92485 455 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 MS4A6EQ96DS6 147 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 HSPBAP1Q96EW2 488 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 LINGO1Q96FE5 620 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 CAPZA3Q96KX2 299 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 C16orf45Q96MC5 204 aaPredicted RBP8.64□□□□□ -1.03
NEDD9-211ENST00000508546 TSNARE1Q96NA8 513 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 QRFPRQ96P65 431 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 YIPF4Q9BSR8 244 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 DESI2Q9BSY9 194 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 BDH2Q9BUT1 245 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 ALOXE3Q9BYJ1 711 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 OR8D2Q9GZM6 311 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 SLC6A15Q9H2J7 730 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 PROK2Q9HC23 129 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 RYDENQ9NUL5 291 aaKnown RBP8.64□□□□□ -1.03
NEDD9-211ENST00000508546 JKAMPQ9P055 326 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 PPP2R2CQ9Y2T4 447 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 DYRK1BQ9Y463 629 aa8.64□□□□□ -1.03
NEDD9-211ENST00000508546 MEGF8Q7Z7M0 2845 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 LRIT2A6NDA9 550 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 LRRC3CA6NJW4 275 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 KDM4EB2RXH2 506 aaPredicted RBP8.63□□□□□ -1.03
NEDD9-211ENST00000508546 SMAD7O15105 426 aaKnown RBP8.63□□□□□ -1.03
NEDD9-211ENST00000508546 ERI3O43414 337 aaKnown RBP8.63□□□□□ -1.03
NEDD9-211ENST00000508546 B3GALT2O43825 422 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 CRLF1O75462 422 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 IL18BPO95998 194 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 ENO2P09104 434 aaPredicted RBP8.63□□□□□ -1.03
NEDD9-211ENST00000508546 SAT1P21673 171 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 GSTM2P28161 218 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 HNRNPH1P31943 449 aaKnown RBP8.63□□□□□ -1.03
NEDD9-211ENST00000508546 OPRM1P35372 400 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 LIM2P55344 173 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 IL2P60568 153 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 KCNJ2P63252 427 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 CRYZQ08257 329 aaKnown RBP8.63□□□□□ -1.03
NEDD9-211ENST00000508546 SERTAD2Q14140 314 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 RCN2Q14257 317 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 ADPRMQ3LIE5 342 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 NSUN5P2Q63ZY6 315 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 CLNKQ7Z7G1 428 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 THOC6Q86W42 341 aaKnown RBP8.63□□□□□ -1.03
NEDD9-211ENST00000508546 P3H2Q8IVL5 708 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.63□□□□□ -1.03
NEDD9-211ENST00000508546 KLHDC8AQ8IYD2 350 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 PM20D2Q8IYS1 436 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 DND1Q8IYX4 353 aaKnown RBP8.63□□□□□ -1.03
NEDD9-211ENST00000508546 LIX1Q8N485 282 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 RNF10Q8N5U6 811 aaKnown RBP8.63□□□□□ -1.03
NEDD9-211ENST00000508546 SLC15A4Q8N697 577 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 ZNF321PQ8N8H1 164 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 FAM47BQ8NA70 645 aa8.63□□□□□ -1.03
NEDD9-211ENST00000508546 C2CD4AQ8NCU7 369 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms