RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 RALAP11233 206 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 SKILP12757 684 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 B4GALT1P15291 398 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 DNAJB1P25685 340 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 ELAVL4P26378 380 aaKnown RBP3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 ACAA2P42765 397 aaKnown RBP3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 SLC1A3P43003 542 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 NUMBP49757 651 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 LBX1P52954 281 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 CLDN17P56750 224 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 RAPSNQ13702 412 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 TRADDQ15628 312 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 STX1AQ16623 288 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 TPD52L1Q16890 204 aaPredicted RBP3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 WSCD2Q2TBF2 565 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 CMPK2Q5EBM0 449 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 DOK6Q6PKX4 331 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 FIP1L1Q6UN15 594 aaKnown RBP3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 KDELC1Q6UW63 502 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 RGS9BPQ6ZS82 235 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 PPP1R42Q7Z4L9 355 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 SYVN1Q86TM6 617 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 MAPKAPK5-AS1Q8N8E1 139 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 GBP7Q8N8V2 638 aaPredicted RBP3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 IPMKQ8NFU5 416 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 OR7A2PQ8NGA2 310 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 OR5AP2Q8NGF4 316 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 GANCQ8TET4 914 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 CHURC1Q8WUH1 139 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 UBTD2Q8WUN7 234 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 SELENOMQ8WWX9 145 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 SLCO4A1Q96BD0 722 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 ZNF274Q96GC6 653 aaPredicted RBP3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 USP28Q96RU2 1077 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 COQ7Q99807 217 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 DGCR6LQ9BY27 220 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 PALMDQ9NP74 551 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 MRPL17Q9NRX2 175 aaKnown RBP3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 EXOC1Q9NV70 894 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 ZNF701Q9NV72 531 aaPredicted RBP3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 PANK4Q9NVE7 773 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 RNF186Q9NXI6 227 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 XPO7Q9UIA9 1087 aaKnown RBP3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 CHMP2BQ9UQN3 213 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 ENTPD4Q9Y227 616 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 MOB4Q9Y3A3 225 aa3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 RRP15Q9Y3B9 282 aaKnown RBP3.57□□□□□ -1.84
TRAPPC13-209ENST00000508304 UBE4BO95155 1302 aa3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 GPR89AB7ZAQ6 455 aa3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 MCF2LO15068 1137 aa3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 CLDN3O15551 220 aa3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 KIF5CO60282 957 aa3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 KHDRBS3O75525 346 aaKnown RBP3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 IDH1O75874 414 aaKnown RBP3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 YES1P07947 543 aa3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 GPR89BP0CG08 455 aa3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 HSPA5P11021 654 aaKnown RBP3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 KRT13P13646 458 aa3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 AKT2P31751 481 aa3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 TRPC1P48995 793 aa3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 DNA2P51530 1060 aa3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 GEMP55040 296 aa3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 SPP2Q13103 211 aa3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 GK2Q14410 553 aaPredicted RBP3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 SNRNP48Q6IEG0 339 aaKnown RBP3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 KLHL10Q6JEL2 608 aa3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 ARSKQ6UWY0 536 aa3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 TMEM26Q6ZUK4 368 aa3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 C1orf186Q6ZWK4 172 aa3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 ANKRD33Q7Z3H0 272 aa3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 HOGA1Q86XE5 327 aa3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 CCDC60Q8IWA6 550 aaPredicted RBP3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 RCOR2Q8IZ40 523 aa3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 TMEM99Q8N816 258 aa3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 SIDT2Q8NBJ9 832 aaKnown RBP3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 OR52N5Q8NH56 324 aa3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 RBM41Q96IZ5 413 aaKnown RBP3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 KRT12Q99456 494 aa3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 CDCA3Q99618 268 aaPredicted RBP3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 NTMT1Q9BV86 223 aa3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 UPF3AQ9H1J1 476 aaKnown RBP3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 FARSBQ9NSD9 589 aaKnown RBP3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 CENPMQ9NSP4 180 aa3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 EPHA6Q9UF33 1036 aa3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 IL36AQ9UHA7 158 aa3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 KLK13Q9UKR3 277 aa3.56□□□□□ -1.84
TRAPPC13-209ENST00000508304 A0A087WZY1 265 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 A8MVM7 634 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 CCL24O00175 119 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 SYT7O43581 403 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 NME2P1O60361 137 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 PCCBP05166 539 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 GPIP06744 558 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 TPBGLP0DKB5 382 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 CALCBP10092 127 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 GNSP15586 552 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 TNNI3P19429 210 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 PSMA5P28066 241 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 PRDX6P30041 224 aa3.55□□□□□ -1.84
TRAPPC13-209ENST00000508304 ADSSP30520 456 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms