RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 SEC16AO15027 2179 aa18.89■□□□□ 0.62
USP53-203ENST00000507597 A0A1W2PR48 441 aa18.89■□□□□ 0.61
USP53-203ENST00000507597 GMNCA6NCL1 334 aa18.89■□□□□ 0.61
USP53-203ENST00000507597 CDC123O75794 336 aaPredicted RBP18.89■□□□□ 0.61
USP53-203ENST00000507597 JUNP05412 331 aaKnown RBP18.89■□□□□ 0.61
USP53-203ENST00000507597 BCKDHAP12694 445 aa18.89■□□□□ 0.61
USP53-203ENST00000507597 PIK3R1P27986 724 aa18.89■□□□□ 0.61
USP53-203ENST00000507597 LSP1P33241 339 aa18.89■□□□□ 0.61
USP53-203ENST00000507597 ALDH9A1P49189 494 aa18.89■□□□□ 0.61
USP53-203ENST00000507597 ERV3-1Q14264 604 aa18.89■□□□□ 0.61
USP53-203ENST00000507597 GSTA3Q16772 222 aa18.89■□□□□ 0.61
USP53-203ENST00000507597 CPLX4Q7Z7G2 160 aa18.89■□□□□ 0.61
USP53-203ENST00000507597 VASH2Q86V25 355 aa18.89■□□□□ 0.61
USP53-203ENST00000507597 SPACA3Q8IXA5 215 aa18.89■□□□□ 0.61
USP53-203ENST00000507597 NATD1Q8N6N6 113 aa18.89■□□□□ 0.61
USP53-203ENST00000507597 OR4K14Q8NGD5 310 aa18.89■□□□□ 0.61
USP53-203ENST00000507597 MTERF3Q96E29 417 aa18.89■□□□□ 0.61
USP53-203ENST00000507597 RBCK1Q9BYM8 510 aa18.89■□□□□ 0.61
USP53-203ENST00000507597 VN1R1Q9GZP7 353 aa18.89■□□□□ 0.61
USP53-203ENST00000507597 LANCL2Q9NS86 450 aa18.89■□□□□ 0.61
USP53-203ENST00000507597 ZNF780BQ9Y6R6 833 aa18.89■□□□□ 0.61
USP53-203ENST00000507597 SCN3AQ9NY46 2000 aa18.88■□□□□ 0.61
USP53-203ENST00000507597 GOLGA8QA0A0J9YX86 632 aa18.88■□□□□ 0.61
USP53-203ENST00000507597 GOLGA8OA6NCC3 632 aa18.88■□□□□ 0.61
USP53-203ENST00000507597 FAM227AF5H4B4 570 aa18.88■□□□□ 0.61
USP53-203ENST00000507597 GOLGA8NF8WBI6 632 aa18.88■□□□□ 0.61
USP53-203ENST00000507597 ZNF195O14628 629 aa18.88■□□□□ 0.61
USP53-203ENST00000507597 UBDO15205 165 aa18.88■□□□□ 0.61
USP53-203ENST00000507597 DNAJB6O75190 326 aa18.88■□□□□ 0.61
USP53-203ENST00000507597 AIFM1O95831 613 aa18.88■□□□□ 0.61
USP53-203ENST00000507597 IL3P08700 152 aa18.88■□□□□ 0.61
USP53-203ENST00000507597 IDO1P14902 403 aa18.88■□□□□ 0.61
USP53-203ENST00000507597 PRPS1L1P21108 318 aa18.88■□□□□ 0.61
USP53-203ENST00000507597 F8A1P23610 371 aa18.88■□□□□ 0.61
USP53-203ENST00000507597 HPCAL1P37235 193 aa18.88■□□□□ 0.61
USP53-203ENST00000507597 IDH3AP50213 366 aa18.88■□□□□ 0.61
USP53-203ENST00000507597 STX1BP61266 288 aa18.88■□□□□ 0.61
USP53-203ENST00000507597 AP2B1P63010 937 aa18.88■□□□□ 0.61
USP53-203ENST00000507597 UGT8Q16880 541 aa18.88■□□□□ 0.61
USP53-203ENST00000507597 SLC9B1Q4ZJI4 515 aa18.88■□□□□ 0.61
USP53-203ENST00000507597 VWA5B1Q5TIE3 1220 aa18.88■□□□□ 0.61
USP53-203ENST00000507597 SHISA6Q6ZSJ9 500 aa18.88■□□□□ 0.61
USP53-203ENST00000507597 LIX1Q8N485 282 aa18.88■□□□□ 0.61
USP53-203ENST00000507597 CATSPER2Q96P56 530 aa18.88■□□□□ 0.61
USP53-203ENST00000507597 ZNF317Q96PQ6 595 aaPredicted RBP18.88■□□□□ 0.61
USP53-203ENST00000507597 WDR55Q9H6Y2 383 aaPredicted RBP18.88■□□□□ 0.61
USP53-203ENST00000507597 IL17BQ9UHF5 180 aa18.88■□□□□ 0.61
USP53-203ENST00000507597 DCTN4Q9UJW0 460 aa18.88■□□□□ 0.61
USP53-203ENST00000507597 RAXQ9Y2V3 346 aa18.88■□□□□ 0.61
USP53-203ENST00000507597 A0A087WV48 116 aa18.87■□□□□ 0.61
USP53-203ENST00000507597 A0A0G2JND7 137 aa18.87■□□□□ 0.61
USP53-203ENST00000507597 JRKO75564 520 aa18.87■□□□□ 0.61
USP53-203ENST00000507597 GPR75O95800 540 aa18.87■□□□□ 0.61
USP53-203ENST00000507597 COX7A2P14406 83 aa18.87■□□□□ 0.61
USP53-203ENST00000507597 SDC1P18827 310 aa18.87■□□□□ 0.61
USP53-203ENST00000507597 DDCP20711 480 aa18.87■□□□□ 0.61
USP53-203ENST00000507597 OTX2P32243 289 aa18.87■□□□□ 0.61
USP53-203ENST00000507597 ARFIP2P53365 341 aa18.87■□□□□ 0.61
USP53-203ENST00000507597 TMPRSS3P57727 454 aa18.87■□□□□ 0.61
USP53-203ENST00000507597 RPS18P62269 152 aaKnown RBP18.87■□□□□ 0.61
USP53-203ENST00000507597 RHAGQ02094 409 aa18.87■□□□□ 0.61
USP53-203ENST00000507597 C6orf163Q5TEZ5 329 aa18.87■□□□□ 0.61
USP53-203ENST00000507597 METTL21CQ5VZV1 264 aa18.87■□□□□ 0.61
USP53-203ENST00000507597 FAM219BQ5XKK7 198 aa18.87■□□□□ 0.61
USP53-203ENST00000507597 C18orf63Q68DL7 685 aa18.87■□□□□ 0.61
USP53-203ENST00000507597 FAM71E1Q6IPT2 247 aa18.87■□□□□ 0.61
USP53-203ENST00000507597 SLC48A1Q6P1K1 146 aa18.87■□□□□ 0.61
USP53-203ENST00000507597 LAPTM4BQ86VI4 370 aa18.87■□□□□ 0.61
USP53-203ENST00000507597 RBM18Q96H35 190 aaKnown RBP18.87■□□□□ 0.61
USP53-203ENST00000507597 FER1L6-AS2Q96M78 137 aa18.87■□□□□ 0.61
USP53-203ENST00000507597 TSSK3Q96PN8 268 aa18.87■□□□□ 0.61
USP53-203ENST00000507597 CSF3RQ99062 836 aa18.87■□□□□ 0.61
USP53-203ENST00000507597 ZBTB18Q99592 522 aa18.87■□□□□ 0.61
USP53-203ENST00000507597 C1orf50Q9BV19 199 aa18.87■□□□□ 0.61
USP53-203ENST00000507597 DPY30Q9C005 99 aa18.87■□□□□ 0.61
USP53-203ENST00000507597 REEP4Q9H6H4 257 aa18.87■□□□□ 0.61
USP53-203ENST00000507597 ATAD3AQ9NVI7 634 aa18.87■□□□□ 0.61
USP53-203ENST00000507597 TEX10Q9NXF1 929 aaPredicted RBP18.87■□□□□ 0.61
USP53-203ENST00000507597 KLHL14Q9P2G3 628 aa18.87■□□□□ 0.61
USP53-203ENST00000507597 ENTPD4Q9Y227 616 aa18.87■□□□□ 0.61
USP53-203ENST00000507597 SRRM3A6NNA2 597 aaPredicted RBP18.86■□□□□ 0.61
USP53-203ENST00000507597 CNOT3O75175 753 aaKnown RBP18.86■□□□□ 0.61
USP53-203ENST00000507597 IFNA16P05015 189 aa18.86■□□□□ 0.61
USP53-203ENST00000507597 ICAM2P13598 275 aa18.86■□□□□ 0.61
USP53-203ENST00000507597 CLNS1AP54105 237 aaKnown RBP18.86■□□□□ 0.61
USP53-203ENST00000507597 RRADP55042 308 aa18.86■□□□□ 0.61
USP53-203ENST00000507597 OR4D2P58180 307 aa18.86■□□□□ 0.61
USP53-203ENST00000507597 PLIN5Q00G26 463 aa18.86■□□□□ 0.61
USP53-203ENST00000507597 LSM12Q3MHD2 195 aaKnown RBP18.86■□□□□ 0.61
USP53-203ENST00000507597 TMEM205Q6UW68 189 aa18.86■□□□□ 0.61
USP53-203ENST00000507597 SCUBE1Q8IWY4 988 aa18.86■□□□□ 0.61
USP53-203ENST00000507597 DNAJB14Q8TBM8 379 aa18.86■□□□□ 0.61
USP53-203ENST00000507597 ZNF764Q96H86 408 aaPredicted RBP18.86■□□□□ 0.61
USP53-203ENST00000507597 ALOXE3Q9BYJ1 711 aa18.86■□□□□ 0.61
USP53-203ENST00000507597 UTS2RQ9UKP6 389 aa18.86■□□□□ 0.61
USP53-203ENST00000507597 SSUH2Q9Y2M2 353 aa18.86■□□□□ 0.61
USP53-203ENST00000507597 TBX19O60806 448 aa18.85■□□□□ 0.61
USP53-203ENST00000507597 ERAL1O75616 437 aaKnown RBP18.85■□□□□ 0.61
USP53-203ENST00000507597 UMODP07911 640 aa18.85■□□□□ 0.61
USP53-203ENST00000507597 G6PDP11413 515 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms