RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 SYDE1Q6ZW31 735 aaPredicted RBP12.77□□□□□ -0.37
DDR1-260ENST00000507533 CILP2Q8IUL8 1156 aa12.77□□□□□ -0.37
DDR1-260ENST00000507533 ZNF321PQ8N8H1 164 aa12.77□□□□□ -0.37
DDR1-260ENST00000507533 SPATA4Q8NEY3 305 aa12.77□□□□□ -0.37
DDR1-260ENST00000507533 KCNJ9Q92806 393 aa12.77□□□□□ -0.37
DDR1-260ENST00000507533 SNF8Q96H20 258 aa12.77□□□□□ -0.37
DDR1-260ENST00000507533 GPR21Q99679 349 aa12.77□□□□□ -0.37
DDR1-260ENST00000507533 WDR83Q9BRX9 315 aaKnown RBP12.77□□□□□ -0.37
DDR1-260ENST00000507533 CCDC68Q9H2F9 335 aa12.77□□□□□ -0.37
DDR1-260ENST00000507533 SPNS1Q9H2V7 528 aa12.77□□□□□ -0.37
DDR1-260ENST00000507533 INTS10Q9NVR2 710 aaKnown RBP12.77□□□□□ -0.37
DDR1-260ENST00000507533 QPCTLQ9NXS2 382 aa12.77□□□□□ -0.37
DDR1-260ENST00000507533 TCRBV7S3A2A0A539 114 aa12.76□□□□□ -0.37
DDR1-260ENST00000507533 CTAGE15A4D2H0 777 aa12.76□□□□□ -0.37
DDR1-260ENST00000507533 C4orf51C9J302 202 aa12.76□□□□□ -0.37
DDR1-260ENST00000507533 URI1O94763 535 aaPredicted RBP12.76□□□□□ -0.37
DDR1-260ENST00000507533 F7P08709 466 aaPredicted RBP12.76□□□□□ -0.37
DDR1-260ENST00000507533 FPR1P21462 350 aa12.76□□□□□ -0.37
DDR1-260ENST00000507533 AHRP35869 848 aa12.76□□□□□ -0.37
DDR1-260ENST00000507533 HNRNPFP52597 415 aaKnown RBP12.76□□□□□ -0.37
DDR1-260ENST00000507533 KCNJ2P63252 427 aa12.76□□□□□ -0.37
DDR1-260ENST00000507533 RNF4P78317 190 aa12.76□□□□□ -0.37
DDR1-260ENST00000507533 BTN3A2P78410 334 aa12.76□□□□□ -0.37
DDR1-260ENST00000507533 SARNPP82979 210 aaKnown RBP12.76□□□□□ -0.37
DDR1-260ENST00000507533 DR1Q01658 176 aa12.76□□□□□ -0.37
DDR1-260ENST00000507533 DUSP8Q13202 625 aa12.76□□□□□ -0.37
DDR1-260ENST00000507533 RUNX2Q13950 521 aa12.76□□□□□ -0.37
DDR1-260ENST00000507533 SF3B4Q15427 424 aaKnown RBP eCLIP12.76□□□□□ -0.379e-6■■□□□ 14.4
DDR1-260ENST00000507533 ACKR1Q16570 336 aa12.76□□□□□ -0.37
DDR1-260ENST00000507533 TOR1AIP1Q5JTV8 583 aa12.76□□□□□ -0.37
DDR1-260ENST00000507533 NEPROQ6NW34 567 aa12.76□□□□□ -0.37
DDR1-260ENST00000507533 ZNF549Q6P9A3 640 aa12.76□□□□□ -0.37
DDR1-260ENST00000507533 CLNKQ7Z7G1 428 aa12.76□□□□□ -0.37
DDR1-260ENST00000507533 CTAGE6Q86UF2 777 aa12.76□□□□□ -0.37
DDR1-260ENST00000507533 PM20D2Q8IYS1 436 aa12.76□□□□□ -0.37
DDR1-260ENST00000507533 LRRC25Q8N386 305 aaPredicted RBP12.76□□□□□ -0.37
DDR1-260ENST00000507533 MORN4Q8NDC4 146 aa12.76□□□□□ -0.37
DDR1-260ENST00000507533 TMEM52Q8NDY8 209 aa12.76□□□□□ -0.37
DDR1-260ENST00000507533 TRPV3Q8NET8 790 aa12.76□□□□□ -0.37
DDR1-260ENST00000507533 OR5L2Q8NGL0 311 aa12.76□□□□□ -0.37
DDR1-260ENST00000507533 CD200R1Q8TD46 325 aa12.76□□□□□ -0.37
DDR1-260ENST00000507533 DAZLQ92904 295 aaKnown RBP12.76□□□□□ -0.37
DDR1-260ENST00000507533 PYCR2Q96C36 320 aa12.76□□□□□ -0.37
DDR1-260ENST00000507533 TRIB1Q96RU8 372 aa12.76□□□□□ -0.37
DDR1-260ENST00000507533 KRT12Q99456 494 aa12.76□□□□□ -0.37
DDR1-260ENST00000507533 TIMP4Q99727 224 aa12.76□□□□□ -0.37
DDR1-260ENST00000507533 OR8D2Q9GZM6 311 aa12.76□□□□□ -0.37
DDR1-260ENST00000507533 UBTD1Q9HAC8 227 aa12.76□□□□□ -0.37
DDR1-260ENST00000507533 PARVBQ9HBI1 364 aa12.76□□□□□ -0.37
DDR1-260ENST00000507533 SYBUQ9NX95 663 aa12.76□□□□□ -0.37
DDR1-260ENST00000507533 ASIC3Q9UHC3 531 aa12.76□□□□□ -0.37
DDR1-260ENST00000507533 NPFFR2Q9Y5X5 522 aa12.76□□□□□ -0.37
DDR1-260ENST00000507533 ARHGAP21Q5T5U3 1957 aa12.76□□□□□ -0.37
DDR1-260ENST00000507533 MYOCOSA0A1B0GUC4 107 aa12.75□□□□□ -0.37
DDR1-260ENST00000507533 LRRC3CA6NJW4 275 aa12.75□□□□□ -0.37
DDR1-260ENST00000507533 ERN1O75460 977 aaKnown RBP12.75□□□□□ -0.37
DDR1-260ENST00000507533 IL18BPO95998 194 aa12.75□□□□□ -0.37
DDR1-260ENST00000507533 TERF1P54274 439 aa12.75□□□□□ -0.37
DDR1-260ENST00000507533 CKAP4Q07065 602 aaKnown RBP12.75□□□□□ -0.37
DDR1-260ENST00000507533 CRYZQ08257 329 aaKnown RBP12.75□□□□□ -0.37
DDR1-260ENST00000507533 CTBP1Q13363 440 aa12.75□□□□□ -0.37
DDR1-260ENST00000507533 DHX34Q14147 1143 aaKnown RBP12.75□□□□□ -0.37
DDR1-260ENST00000507533 CSHL1Q14406 222 aa12.75□□□□□ -0.37
DDR1-260ENST00000507533 PRAMEF20Q5VT98 475 aa12.75□□□□□ -0.37
DDR1-260ENST00000507533 ANKRD22Q5VYY1 191 aa12.75□□□□□ -0.37
DDR1-260ENST00000507533 KIAA0930Q6ICG6 404 aaPredicted RBP12.75□□□□□ -0.37
DDR1-260ENST00000507533 ADGRD1Q6QNK2 874 aa12.75□□□□□ -0.37
DDR1-260ENST00000507533 ZNF572Q7Z3I7 529 aaPredicted RBP12.75□□□□□ -0.37
DDR1-260ENST00000507533 PALM2Q8IXS6 379 aa12.75□□□□□ -0.37
DDR1-260ENST00000507533 ANKRD53Q8N9V6 530 aa12.75□□□□□ -0.37
DDR1-260ENST00000507533 FAM47BQ8NA70 645 aa12.75□□□□□ -0.37
DDR1-260ENST00000507533 MCUQ8NE86 351 aa12.75□□□□□ -0.37
DDR1-260ENST00000507533 OR8K3Q8NH51 312 aa12.75□□□□□ -0.37
DDR1-260ENST00000507533 OR14A16Q8NHC5 309 aa12.75□□□□□ -0.37
DDR1-260ENST00000507533 PPP1R14CQ8TAE6 165 aa12.75□□□□□ -0.37
DDR1-260ENST00000507533 PTPMT1Q8WUK0 201 aaPredicted RBP12.75□□□□□ -0.37
DDR1-260ENST00000507533 JSRP1Q96MG2 331 aaPredicted RBP12.75□□□□□ -0.37
DDR1-260ENST00000507533 SH2D2AQ9NP31 389 aa12.75□□□□□ -0.37
DDR1-260ENST00000507533 FBXO6Q9NRD1 293 aaPredicted RBP12.75□□□□□ -0.37
DDR1-260ENST00000507533 GALNT8Q9NY28 637 aa12.75□□□□□ -0.37
DDR1-260ENST00000507533 C6orf203Q9P0P8 240 aaPredicted RBP12.75□□□□□ -0.37
DDR1-260ENST00000507533 NDRG3Q9UGV2 375 aa12.75□□□□□ -0.37
DDR1-260ENST00000507533 SOX13Q9UN79 622 aa12.75□□□□□ -0.37
DDR1-260ENST00000507533 CAMK2AQ9UQM7 478 aa12.75□□□□□ -0.37
DDR1-260ENST00000507533 MBD3L3A6NE82 208 aaPredicted RBP12.74□□□□□ -0.37
DDR1-260ENST00000507533 CD8B2A6NJW9 211 aa12.74□□□□□ -0.37
DDR1-260ENST00000507533 EIF3FO00303 357 aaPredicted RBP12.74□□□□□ -0.37
DDR1-260ENST00000507533 DNALI1O14645 258 aaPredicted RBP12.74□□□□□ -0.37
DDR1-260ENST00000507533 F12P00748 615 aaPredicted RBP12.74□□□□□ -0.37
DDR1-260ENST00000507533 C8GP07360 202 aa12.74□□□□□ -0.37
DDR1-260ENST00000507533 TNNI3P19429 210 aa12.74□□□□□ -0.37
DDR1-260ENST00000507533 SAT1P21673 171 aa12.74□□□□□ -0.37
DDR1-260ENST00000507533 CPA2P48052 419 aa12.74□□□□□ -0.37
DDR1-260ENST00000507533 RAB38P57729 211 aa12.74□□□□□ -0.37
DDR1-260ENST00000507533 KRTAP1-1Q07627 177 aa12.74□□□□□ -0.37
DDR1-260ENST00000507533 C2orf54Q08AI8 447 aa12.74□□□□□ -0.37
DDR1-260ENST00000507533 TBL3Q12788 808 aaKnown RBP12.74□□□□□ -0.37
DDR1-260ENST00000507533 ASPHQ12797 758 aa12.74□□□□□ -0.37
DDR1-260ENST00000507533 RBBP5Q15291 538 aaKnown RBP12.74□□□□□ -0.37
DDR1-260ENST00000507533 WHAMMP3Q1A5X7 153 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms