RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 RPF2Q9H7B2 306 aaKnown RBP13.36□□□□□ -0.27
RNF4-208ENST00000507247 MKKSQ9NPJ1 570 aaPredicted RBP13.36□□□□□ -0.27
RNF4-208ENST00000507247 CCDC167Q9P0B6 97 aa13.36□□□□□ -0.27
RNF4-208ENST00000507247 IFT80Q9P2H3 777 aaPredicted RBP13.36□□□□□ -0.27
RNF4-208ENST00000507247 ATP6V1HQ9UI12 483 aa13.36□□□□□ -0.27
RNF4-208ENST00000507247 CES1P1Q9UKY3 287 aa13.36□□□□□ -0.27
RNF4-208ENST00000507247 SPACA6W5XKT8 324 aa13.36□□□□□ -0.27
RNF4-208ENST00000507247 A0A1W2PS29 197 aa13.35□□□□□ -0.27
RNF4-208ENST00000507247 OR2W5A6NFC9 320 aa13.35□□□□□ -0.27
RNF4-208ENST00000507247 TGFBR3LH3BV60 316 aa13.35□□□□□ -0.27
RNF4-208ENST00000507247 BRINP1O60477 761 aa13.35□□□□□ -0.27
RNF4-208ENST00000507247 TBX19O60806 448 aa13.35□□□□□ -0.27
RNF4-208ENST00000507247 B4GALT2O60909 372 aa13.35□□□□□ -0.27
RNF4-208ENST00000507247 DXOO77932 396 aaKnown RBP13.35□□□□□ -0.27
RNF4-208ENST00000507247 FHP07954 510 aa13.35□□□□□ -0.27
RNF4-208ENST00000507247 COX7A2P14406 83 aa13.35□□□□□ -0.27
RNF4-208ENST00000507247 DRD2P14416 443 aa13.35□□□□□ -0.27
RNF4-208ENST00000507247 PCSK2P16519 638 aa13.35□□□□□ -0.27
RNF4-208ENST00000507247 TLX1P31314 330 aaPredicted RBP13.35□□□□□ -0.27
RNF4-208ENST00000507247 HPCAL1P37235 193 aa13.35□□□□□ -0.27
RNF4-208ENST00000507247 CLNS1AP54105 237 aaKnown RBP13.35□□□□□ -0.27
RNF4-208ENST00000507247 PHC1P78364 1004 aa13.35□□□□□ -0.27
RNF4-208ENST00000507247 BTG2P78543 158 aa13.35□□□□□ -0.27
RNF4-208ENST00000507247 MAP7Q14244 749 aa13.35□□□□□ -0.27
RNF4-208ENST00000507247 NKG7Q16617 165 aa13.35□□□□□ -0.27
RNF4-208ENST00000507247 MPEG1Q2M385 716 aa13.35□□□□□ -0.27
RNF4-208ENST00000507247 SPANXN4Q5MJ08 99 aa13.35□□□□□ -0.27
RNF4-208ENST00000507247 OR52E8Q6IFG1 317 aa13.35□□□□□ -0.27
RNF4-208ENST00000507247 FAM180BQ6P0A1 224 aa13.35□□□□□ -0.27
RNF4-208ENST00000507247 SLC48A1Q6P1K1 146 aa13.35□□□□□ -0.27
RNF4-208ENST00000507247 MRPL14Q6P1L8 145 aaKnown RBP13.35□□□□□ -0.27
RNF4-208ENST00000507247 MED25Q71SY5 747 aa13.35□□□□□ -0.27
RNF4-208ENST00000507247 OVCH1Q7RTY7 1134 aa13.35□□□□□ -0.27
RNF4-208ENST00000507247 FITM2Q8N6M3 262 aa13.35□□□□□ -0.27
RNF4-208ENST00000507247 STT3BQ8TCJ2 826 aa13.35□□□□□ -0.27
RNF4-208ENST00000507247 FKBP10Q96AY3 582 aa13.35□□□□□ -0.27
RNF4-208ENST00000507247 LRRC37BQ96QE4 947 aa13.35□□□□□ -0.27
RNF4-208ENST00000507247 OR1F2PQ96R84 312 aa13.35□□□□□ -0.27
RNF4-208ENST00000507247 TGIF2Q9GZN2 237 aa13.35□□□□□ -0.27
RNF4-208ENST00000507247 WDR41Q9HAD4 459 aa13.35□□□□□ -0.27
RNF4-208ENST00000507247 SLC52A3Q9NQ40 469 aa13.35□□□□□ -0.27
RNF4-208ENST00000507247 MIEF1Q9NQG6 463 aa13.35□□□□□ -0.27
RNF4-208ENST00000507247 ZNF282Q9UDV7 671 aaPredicted RBP13.35□□□□□ -0.27
RNF4-208ENST00000507247 CLDN16Q9Y5I7 305 aa13.35□□□□□ -0.27
RNF4-208ENST00000507247 CAPN7Q9Y6W3 813 aa13.35□□□□□ -0.27
RNF4-208ENST00000507247 FAM234BA2RU67 622 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 TRABD2BA6NFA1 517 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 VSTM2BA6NLU5 285 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 CAPN14A8MX76 684 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 NR5A2O00482 541 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 FGF17O60258 216 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 RAD1O60671 282 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 LDB3O75112 727 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 ZGLP1P0C6A0 271 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 LAMP1P11279 417 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 ADSLP30566 484 aaPredicted RBP13.34□□□□□ -0.27
RNF4-208ENST00000507247 POLR2JP52435 117 aaKnown RBP13.34□□□□□ -0.27
RNF4-208ENST00000507247 DGKQP52824 942 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 WNT3P56703 355 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 ID2Q02363 134 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 DUSP2Q05923 314 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 RCAN2Q14206 197 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 ZNF750Q32MQ0 723 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 PGS1Q32NB8 556 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 FAM174BQ3ZCQ3 159 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 MLIPQ5VWP3 458 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 FAM91A1Q658Y4 838 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 BLOC1S3Q6QNY0 202 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 SHISA6Q6ZSJ9 500 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 R3HCC1LQ7Z5L2 792 aaKnown RBP13.34□□□□□ -0.27
RNF4-208ENST00000507247 CAMKMTQ7Z624 323 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 LAPTM4BQ86VI4 370 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 SCUBE1Q8IWY4 988 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 OR4N5Q8IXE1 308 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 ZNF595Q8IYB9 648 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 PRSS58Q8IYP2 241 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 NLGN4XQ8N0W4 816 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 GLB1L3Q8NCI6 653 aaPredicted RBP13.34□□□□□ -0.27
RNF4-208ENST00000507247 NLGN4YQ8NFZ3 816 aaPredicted RBP13.34□□□□□ -0.27
RNF4-208ENST00000507247 CT55Q8WUE5 264 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 CIDECQ96AQ7 238 aaPredicted RBP13.34□□□□□ -0.27
RNF4-208ENST00000507247 EXOSC8Q96B26 276 aaKnown RBP13.34□□□□□ -0.27
RNF4-208ENST00000507247 ANKRD9Q96BM1 317 aaPredicted RBP13.34□□□□□ -0.27
RNF4-208ENST00000507247 PPCDCQ96CD2 204 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 COQ8BQ96D53 544 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 MTERF3Q96E29 417 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 ZNF764Q96H86 408 aaPredicted RBP13.34□□□□□ -0.27
RNF4-208ENST00000507247 ZBTB18Q99592 522 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 SPSB2Q99619 263 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 SLC26A1Q9H2B4 701 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 PRDM9Q9NQV7 894 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 PRTFDC1Q9NRG1 225 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 EHD3Q9NZN3 535 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 SH3BP4Q9P0V3 963 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 UTS2RQ9UKP6 389 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 PADI1Q9ULC6 663 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 MAPRE3Q9UPY8 281 aa13.34□□□□□ -0.27
RNF4-208ENST00000507247 MYOCOSA0A1B0GUC4 107 aa13.33□□□□□ -0.28
RNF4-208ENST00000507247 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.33□□□□□ -0.28
RNF4-208ENST00000507247 STMND1H3BQB6 276 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms