RNA–Protein interactions for RNA: ENST00000504010.5

NR1I3-219, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 944 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-219ENST00000504010 PACS2Q86VP3 889 aa8.53□□□□□ -1.04
NR1I3-219ENST00000504010 BPHLQ86WA6 291 aaPredicted RBP8.53□□□□□ -1.04
NR1I3-219ENST00000504010 APLFQ8IW19 511 aaPredicted RBP8.53□□□□□ -1.04
NR1I3-219ENST00000504010 WDR75Q8IWA0 830 aaKnown RBP8.53□□□□□ -1.04
NR1I3-219ENST00000504010 TRIM42Q8IWZ5 723 aa8.53□□□□□ -1.04
NR1I3-219ENST00000504010 OR4N5Q8IXE1 308 aa8.53□□□□□ -1.04
NR1I3-219ENST00000504010 AFAP1L2Q8N4X5 818 aa8.53□□□□□ -1.04
NR1I3-219ENST00000504010 ACOT4Q8N9L9 421 aa8.53□□□□□ -1.04
NR1I3-219ENST00000504010 TMEM52Q8NDY8 209 aa8.53□□□□□ -1.04
NR1I3-219ENST00000504010 OR51Q1Q8NH59 317 aa8.53□□□□□ -1.04
NR1I3-219ENST00000504010 CLHC1Q8NHS4 586 aa8.53□□□□□ -1.04
NR1I3-219ENST00000504010 RGMAQ96B86 450 aa8.53□□□□□ -1.04
NR1I3-219ENST00000504010 MARK4Q96L34 752 aa8.53□□□□□ -1.04
NR1I3-219ENST00000504010 C5orf34Q96MH7 638 aa8.53□□□□□ -1.04
NR1I3-219ENST00000504010 SERPINI1Q99574 410 aa8.53□□□□□ -1.04
NR1I3-219ENST00000504010 TRMOQ9BU70 441 aa8.53□□□□□ -1.04
NR1I3-219ENST00000504010 C1orf50Q9BV19 199 aa8.53□□□□□ -1.04
NR1I3-219ENST00000504010 ZNF717Q9BY31 904 aaPredicted RBP8.53□□□□□ -1.04
NR1I3-219ENST00000504010 PITHD1Q9GZP4 211 aaPredicted RBP8.53□□□□□ -1.04
NR1I3-219ENST00000504010 WDR55Q9H6Y2 383 aaPredicted RBP8.53□□□□□ -1.04
NR1I3-219ENST00000504010 THAP1Q9NVV9 213 aa8.53□□□□□ -1.04
NR1I3-219ENST00000504010 GPN3Q9UHW5 284 aaPredicted RBP8.53□□□□□ -1.04
NR1I3-219ENST00000504010 SLC5A6Q9Y289 635 aa8.53□□□□□ -1.04
NR1I3-219ENST00000504010 STK38LQ9Y2H1 464 aa8.53□□□□□ -1.04
NR1I3-219ENST00000504010 RAP2CQ9Y3L5 183 aa8.53□□□□□ -1.04
NR1I3-219ENST00000504010 FER1L5A0AVI2 2057 aa8.53□□□□□ -1.04
NR1I3-219ENST00000504010 DIDO1Q9BTC0 2240 aaKnown RBP8.53□□□□□ -1.04
NR1I3-219ENST00000504010 SVILO95425 2214 aa8.52□□□□□ -1.05
NR1I3-219ENST00000504010 A0A1W2PS29 197 aa8.52□□□□□ -1.05
NR1I3-219ENST00000504010 A8MUA0 341 aa8.52□□□□□ -1.05
NR1I3-219ENST00000504010 K7EM74 188 aa8.52□□□□□ -1.05
NR1I3-219ENST00000504010 FOXE1O00358 373 aaPredicted RBP8.52□□□□□ -1.05
NR1I3-219ENST00000504010 TXNDC9O14530 226 aa8.52□□□□□ -1.05
NR1I3-219ENST00000504010 B3GALT2O43825 422 aa8.52□□□□□ -1.05
NR1I3-219ENST00000504010 SEC22BO75396 215 aa8.52□□□□□ -1.05
NR1I3-219ENST00000504010 SORBS2O94875 1100 aaKnown RBP8.52□□□□□ -1.05
NR1I3-219ENST00000504010 NSA2O95478 260 aaKnown RBP8.52□□□□□ -1.05
NR1I3-219ENST00000504010 CHEK2O96017 543 aa8.52□□□□□ -1.05
NR1I3-219ENST00000504010 HBQ1P09105 142 aa8.52□□□□□ -1.05
NR1I3-219ENST00000504010 AGXTP21549 392 aa8.52□□□□□ -1.05
NR1I3-219ENST00000504010 TPP2P29144 1249 aaPredicted RBP8.52□□□□□ -1.05
NR1I3-219ENST00000504010 PTGER1P34995 402 aa8.52□□□□□ -1.05
NR1I3-219ENST00000504010 STAT5AP42229 794 aa8.52□□□□□ -1.05
NR1I3-219ENST00000504010 XCR1P46094 333 aa8.52□□□□□ -1.05
NR1I3-219ENST00000504010 RPL38P63173 70 aaKnown RBP8.52□□□□□ -1.05
NR1I3-219ENST00000504010 BTG2P78543 158 aa8.52□□□□□ -1.05
NR1I3-219ENST00000504010 GALNT1Q10472 559 aaPredicted RBP8.52□□□□□ -1.05
NR1I3-219ENST00000504010 HERC3Q15034 1050 aa8.52□□□□□ -1.05
NR1I3-219ENST00000504010 EIF2S3LQ2VIR3 472 aaKnown RBP8.52□□□□□ -1.05
NR1I3-219ENST00000504010 MINDY4Q4G0A6 757 aa8.52□□□□□ -1.05
NR1I3-219ENST00000504010 SLC9B1Q4ZJI4 515 aa8.52□□□□□ -1.05
NR1I3-219ENST00000504010 GARNL3Q5VVW2 1013 aa8.52□□□□□ -1.05
NR1I3-219ENST00000504010 COMMD6Q7Z4G1 85 aa8.52□□□□□ -1.05
NR1I3-219ENST00000504010 ZC3H7AQ8IWR0 971 aaKnown RBP8.52□□□□□ -1.05
NR1I3-219ENST00000504010 METTL4Q8N3J2 472 aa8.52□□□□□ -1.05
NR1I3-219ENST00000504010 ESX1Q8N693 406 aa8.52□□□□□ -1.05
NR1I3-219ENST00000504010 RFWD2Q8NHY2 731 aa8.52□□□□□ -1.05
NR1I3-219ENST00000504010 PRR7Q8TB68 274 aa8.52□□□□□ -1.05
NR1I3-219ENST00000504010 STT3BQ8TCJ2 826 aa8.52□□□□□ -1.05
NR1I3-219ENST00000504010 CHTF18Q8WVB6 975 aa8.52□□□□□ -1.05
NR1I3-219ENST00000504010 GFM2Q969S9 779 aaKnown RBP8.52□□□□□ -1.05
NR1I3-219ENST00000504010 TUBGCP3Q96CW5 907 aa8.52□□□□□ -1.05
NR1I3-219ENST00000504010 MAGEB18Q96M61 343 aa8.52□□□□□ -1.05
NR1I3-219ENST00000504010 TEX10Q9NXF1 929 aaPredicted RBP8.52□□□□□ -1.05
NR1I3-219ENST00000504010 C5AR2Q9P296 337 aa8.52□□□□□ -1.05
NR1I3-219ENST00000504010 VPS29Q9UBQ0 182 aa8.52□□□□□ -1.05
NR1I3-219ENST00000504010 BAIAP2L1Q9UHR4 511 aa8.52□□□□□ -1.05
NR1I3-219ENST00000504010 ENTPD4Q9Y227 616 aa8.52□□□□□ -1.05
NR1I3-219ENST00000504010 FARSAQ9Y285 508 aaKnown RBP8.52□□□□□ -1.05
NR1I3-219ENST00000504010 PTRH2Q9Y3E5 179 aaKnown RBP8.52□□□□□ -1.05
NR1I3-219ENST00000504010 CCL27Q9Y4X3 112 aa8.52□□□□□ -1.05
NR1I3-219ENST00000504010 SLC22A7Q9Y694 548 aa8.52□□□□□ -1.05
NR1I3-219ENST00000504010 CCDC88CQ9P219 2028 aa8.52□□□□□ -1.05
NR1I3-219ENST00000504010 DNHD1Q96M86 4753 aa8.51□□□□□ -1.05
NR1I3-219ENST00000504010 IGHV3-20A0A0C4DH32 117 aa8.51□□□□□ -1.05
NR1I3-219ENST00000504010 URADA6NGE7 173 aa8.51□□□□□ -1.05
NR1I3-219ENST00000504010 C9J4A7 227 aa8.51□□□□□ -1.05
NR1I3-219ENST00000504010 SLC28A1O00337 649 aa8.51□□□□□ -1.05
NR1I3-219ENST00000504010 LRATO95237 230 aa8.51□□□□□ -1.05
NR1I3-219ENST00000504010 FGF4P08620 206 aa8.51□□□□□ -1.05
NR1I3-219ENST00000504010 VIMP08670 466 aaKnown RBP8.51□□□□□ -1.05
NR1I3-219ENST00000504010 FURINP09958 794 aa8.51□□□□□ -1.05
NR1I3-219ENST00000504010 ZGLP1P0C6A0 271 aa8.51□□□□□ -1.05
NR1I3-219ENST00000504010 HIST1H1TP22492 207 aaPredicted RBP8.51□□□□□ -1.05
NR1I3-219ENST00000504010 CPN2P22792 545 aa8.51□□□□□ -1.05
NR1I3-219ENST00000504010 TACR1P25103 407 aa8.51□□□□□ -1.05
NR1I3-219ENST00000504010 EPHA3P29320 983 aa8.51□□□□□ -1.05
NR1I3-219ENST00000504010 PPP2R1BP30154 601 aa8.51□□□□□ -1.05
NR1I3-219ENST00000504010 OTX2P32243 289 aa8.51□□□□□ -1.05
NR1I3-219ENST00000504010 SERPINB5P36952 375 aa8.51□□□□□ -1.05
NR1I3-219ENST00000504010 MDH1P40925 334 aaKnown RBP8.51□□□□□ -1.05
NR1I3-219ENST00000504010 ALDH9A1P49189 494 aa8.51□□□□□ -1.05
NR1I3-219ENST00000504010 PGDP52209 483 aa8.51□□□□□ -1.05
NR1I3-219ENST00000504010 MTTPP55157 894 aa8.51□□□□□ -1.05
NR1I3-219ENST00000504010 LIM2P55344 173 aa8.51□□□□□ -1.05
NR1I3-219ENST00000504010 NME5P56597 212 aa8.51□□□□□ -1.05
NR1I3-219ENST00000504010 NAA20P61599 178 aa8.51□□□□□ -1.05
NR1I3-219ENST00000504010 KLC1Q07866 573 aa8.51□□□□□ -1.05
NR1I3-219ENST00000504010 CSTF3Q12996 717 aaKnown RBP8.51□□□□□ -1.05
NR1I3-219ENST00000504010 IL10RAQ13651 578 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms