RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 NKX2-6A6NCS4 301 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 OR6C76A6NM76 312 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 HSPB2A8KAH6 182 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 AHRRA9YTQ3 701 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 C17orf105B2RV13 164 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 NPIPA2E9PIF3 369 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 NPIPA3F8WFD2 350 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 CCDC188H7C350 402 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 CDC7O00311 574 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 CLGNO14967 610 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 TP73O15350 636 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 EIF3HO15372 352 aaKnown RBP eCLIP5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 TAPBPO15533 448 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 DYRK3O43781 588 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 CDC40O60508 579 aaKnown RBP eCLIP5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 UGDHO60701 494 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 CDH16O75309 829 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 STK16O75716 305 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 SEC31AO94979 1220 aaKnown RBP5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 ZWINTO95229 277 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 P04436 131 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 GSTA2P09210 222 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 COX7A2P14406 83 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 CD1DP15813 335 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 HIST1H1TP22492 207 aaPredicted RBP5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 ATP5A1P25705 553 aaKnown RBP5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 CEACAM8P31997 349 aaPredicted RBP5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 HNF4AP41235 474 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 PIK3CBP42338 1070 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 MAGEA5P43359 124 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 STT3AP46977 705 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 MAN2A2P49641 1150 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 HNRNPFP52597 415 aaKnown RBP5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 ART1P52961 327 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 IST1P53990 364 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 ARL4CP56559 192 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 TAS2R39P59534 338 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 GPR85P60893 370 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 BMPR2Q13873 1038 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 TSNQ15631 228 aaKnown RBP5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 ZKSCAN8Q15776 578 aaPredicted RBP5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 HSPB2Q16082 182 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 PDK4Q16654 411 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 HIST2H2ACQ16777 129 aaPredicted RBP5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 NHSL2Q5HYW2 709 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 C10orf62Q5T681 223 aaPredicted RBP5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 C1orf185Q5T7R7 199 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 WLSQ5T9L3 541 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 SLC22A10Q63ZE4 541 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 HIST2H2AA3Q6FI13 130 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 ADGRD1Q6QNK2 874 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 ARSKQ6UWY0 536 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 LYPD8Q6UX82 237 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 IL20RBQ6UXL0 311 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 C3P1Q6ZMU1 363 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 CHSY3Q70JA7 882 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 FRA10AC1Q70Z53 315 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 LRRC70Q7Z2Q7 622 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 TGIF2LYQ8IUE0 185 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 SPNS2Q8IVW8 549 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 ST13P4Q8IZP2 240 aaPredicted RBP5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 TMEM52Q8NDY8 209 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 C17orf47Q8NEP4 570 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 OR5M3Q8NGP4 307 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 SLC22A8Q8TCC7 542 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 SLC2A12Q8TD20 617 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 ZNF473Q8WTR7 871 aaKnown RBP5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 ANKRD49Q8WVL7 239 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 TANKQ92844 425 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 TP53INP1Q96A56 240 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 ANKRD9Q96BM1 317 aaPredicted RBP5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 CMTM7Q96FZ5 175 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 RBM18Q96H35 190 aaKnown RBP5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 FBXL20Q96IG2 436 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 WDR83Q9BRX9 315 aaKnown RBP5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 TMEM79Q9BSE2 394 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 DDX47Q9H0S4 455 aaKnown RBP5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 DEFB127Q9H1M4 99 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 ZNF703Q9H7S9 590 aaPredicted RBP5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 COPS7BQ9H9Q2 264 aaPredicted RBP5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 PNPLA3Q9NST1 481 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 RNF14Q9UBS8 474 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 Q9UFV3 132 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 FETUBQ9UGM5 382 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 PTBP2Q9UKA9 531 aaKnown RBP5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 FREM3P0C091 2139 aa5.63□□□□□ -1.51
LSM3P4-201ENST00000502948 TRGV5A0A0B4J1U4 118 aa5.63□□□□□ -1.51
LSM3P4-201ENST00000502948 NPEPPSL1A6NEC2 478 aa5.63□□□□□ -1.51
LSM3P4-201ENST00000502948 A8MUA0 341 aa5.63□□□□□ -1.51
LSM3P4-201ENST00000502948 CAPN14A8MX76 684 aa5.63□□□□□ -1.51
LSM3P4-201ENST00000502948 WWP2O00308 870 aa5.63□□□□□ -1.51
LSM3P4-201ENST00000502948 DVL2O14641 736 aa5.63□□□□□ -1.51
LSM3P4-201ENST00000502948 ZNHIT1O43257 154 aa5.63□□□□□ -1.51
LSM3P4-201ENST00000502948 ZSCAN12O43309 604 aa5.63□□□□□ -1.51
LSM3P4-201ENST00000502948 ZNF354AO60765 605 aaPredicted RBP5.63□□□□□ -1.51
LSM3P4-201ENST00000502948 PRAMEF4O60810 478 aa5.63□□□□□ -1.51
LSM3P4-201ENST00000502948 SNX4O95219 450 aa5.63□□□□□ -1.51
LSM3P4-201ENST00000502948 NADKO95544 446 aaPredicted RBP5.63□□□□□ -1.51
LSM3P4-201ENST00000502948 ETHE1O95571 254 aa5.63□□□□□ -1.51
LSM3P4-201ENST00000502948 EPPINO95925 133 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms