RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 ENPP4Q9Y6X5 453 aa16.52■□□□□ 0.24
HMGXB3-201ENST00000502717 LOC285095A0A1B0GVY8 99 aa16.52■□□□□ 0.23
HMGXB3-201ENST00000502717 J3QLW9 94 aa16.52■□□□□ 0.23
HMGXB3-201ENST00000502717 SLC16A5O15375 505 aa16.52■□□□□ 0.23
HMGXB3-201ENST00000502717 FLRT2O43155 660 aa16.52■□□□□ 0.23
HMGXB3-201ENST00000502717 ZNF19P17023 458 aa16.52■□□□□ 0.23
HMGXB3-201ENST00000502717 TRAM2Q15035 370 aa16.52■□□□□ 0.23
HMGXB3-201ENST00000502717 METTL2BQ6P1Q9 378 aaKnown RBP16.52■□□□□ 0.23
HMGXB3-201ENST00000502717 TPRG1Q6ZUI0 275 aa16.52■□□□□ 0.23
HMGXB3-201ENST00000502717 SPATC1Q76KD6 591 aa16.52■□□□□ 0.23
HMGXB3-201ENST00000502717 LGR4Q9BXB1 951 aa16.52■□□□□ 0.23
HMGXB3-201ENST00000502717 LRP5O75197 1615 aa16.52■□□□□ 0.23
HMGXB3-201ENST00000502717 CACNB4O00305 520 aaPredicted RBP16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 TOXO94900 526 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 ALX3O95076 343 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 TIA1P31483 386 aaKnown RBP eCLIP16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 ADAM8P78325 824 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 SNTA1Q13424 505 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 PLEKHS1Q5SXH7 462 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 FAM180AQ6UWF9 173 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 PSD2Q9BQI7 771 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 NUDT15Q9NV35 164 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 NDRG2Q9UN36 371 aaKnown RBP16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 DLGAP4Q9Y2H0 992 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 TEX51A0A1B0GUA7 166 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 LHCGRP22888 699 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 ACVR2AP27037 513 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 FUT10Q6P4F1 479 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 RPTNQ6XPR3 784 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 CELF2-AS1Q8N7Q2 184 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 CD200R1Q8TD46 325 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 LDB2O43679 373 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 EPCAMP16422 314 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 ZNF3P17036 446 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 SEMG2Q02383 582 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 CDC20Q12834 499 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 INAVAQ3KP66 663 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 CNIH2Q6PI25 160 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 LHFPL3Q86UP9 236 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 YIPF7Q8N8F6 280 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 ASB12Q8WXK4 309 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 IGSF8Q969P0 613 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 S100A16Q96FQ6 103 aaKnown RBP16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 GPRC5BQ9NZH0 403 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 IQCF3P0C7M6 154 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 PRKACAP17612 351 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 HRH2P25021 359 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 C18orf21Q32NC0 220 aaPredicted RBP16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 BCL2L15Q5TBC7 163 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 TBPL2Q6SJ96 375 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 SLC46A3Q7Z3Q1 461 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 TMC8Q8IU68 726 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 CLECL1Q8IZS7 167 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 C16orf70Q9BSU1 422 aa16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 BHLHE41Q9C0J9 482 aaPredicted RBP16.51■□□□□ 0.23
HMGXB3-201ENST00000502717 FAM189BP81408 668 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 TATDN3Q17R31 274 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 SLC25A25Q6KCM7 469 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 GID4Q8IVV7 300 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 SAMD14Q8IZD0 417 aaPredicted RBP16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 OR51B5Q9H339 312 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 NT5DC2Q9H857 520 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 ALG5Q9Y673 324 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 GNSP15586 552 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 ARRB2P32121 409 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 RING1Q06587 406 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 CCSAPQ6IQ19 270 aaPredicted RBP16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 SYNPOQ8N3V7 929 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 OR6C4Q8NGE1 309 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 ZNF300Q96RE9 604 aaPredicted RBP16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 TEX13CA0A0J9YWL9 993 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 UBFD1O14562 309 aaKnown RBP16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 SCAMP2O15127 329 aaKnown RBP16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 APOC3P02656 99 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 DDOSTP39656 456 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 CBLL1Q75N03 491 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 PAQR7Q86WK9 346 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 ARHGAP12Q8IWW6 846 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 DNAJC22Q8N4W6 341 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 FBXW2Q9UKT8 454 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 CROCCQ5TZA2 2017 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 TBC1D3DA0A087WVF3 549 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 TBC1D3IA0A087WXS9 549 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 TBC1D3EA0A087X179 549 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 TBC1D3KA0A087X1G2 549 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 IQCMA0A1B0GVH7 501 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 TBC1D3FA6NER0 549 aaPredicted RBP16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 TBC1D3LB9A6J9 549 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 PAHP00439 452 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 TBC1D3HP0C7X1 549 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 PRSS56P0CW18 603 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 ADRA1AP35348 466 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 EMP3P54852 163 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 ERVK-21P61565 698 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 TBC1D3GQ6DHY5 549 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 TBC1D3CQ6IPX1 549 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 CNKSR3Q6P9H4 555 aa16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 HAGHLQ6PII5 290 aaPredicted RBP16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 TBC1D3Q8IZP1 549 aaPredicted RBP16.5■□□□□ 0.23
HMGXB3-201ENST00000502717 ZMIZ2Q8NF64 920 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms