RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 SLU7O95391 586 aaKnown RBP1.85□□□□□ -2.11
SMAD1-203ENST00000502342 LY6G6DO95868 133 aa1.85□□□□□ -2.11
SMAD1-203ENST00000502342 IFNAR1P17181 557 aa1.85□□□□□ -2.11
SMAD1-203ENST00000502342 GJB2P29033 226 aa1.85□□□□□ -2.11
SMAD1-203ENST00000502342 PPP2R1BP30154 601 aa1.85□□□□□ -2.11
SMAD1-203ENST00000502342 IER3P46695 156 aa1.85□□□□□ -2.11
SMAD1-203ENST00000502342 KCNJ1P48048 391 aa1.85□□□□□ -2.11
SMAD1-203ENST00000502342 FHITP49789 147 aa1.85□□□□□ -2.11
SMAD1-203ENST00000502342 NAAAQ02083 359 aa1.85□□□□□ -2.11
SMAD1-203ENST00000502342 SLC3A1Q07837 685 aa1.85□□□□□ -2.11
SMAD1-203ENST00000502342 RFTN1Q14699 578 aaPredicted RBP1.85□□□□□ -2.11
SMAD1-203ENST00000502342 LTB4RQ15722 352 aa1.85□□□□□ -2.11
SMAD1-203ENST00000502342 PRR30Q53SZ7 412 aaPredicted RBP1.85□□□□□ -2.11
SMAD1-203ENST00000502342 VWA2Q5GFL6 755 aa1.85□□□□□ -2.11
SMAD1-203ENST00000502342 LINC00242Q5T6M2 205 aa1.85□□□□□ -2.11
SMAD1-203ENST00000502342 SNRNP48Q6IEG0 339 aaKnown RBP1.85□□□□□ -2.11
SMAD1-203ENST00000502342 RFWD3Q6PCD5 774 aa1.85□□□□□ -2.11
SMAD1-203ENST00000502342 TMED8Q6PL24 325 aaPredicted RBP1.85□□□□□ -2.11
SMAD1-203ENST00000502342 CCBE1Q6UXH8 406 aaPredicted RBP1.85□□□□□ -2.11
SMAD1-203ENST00000502342 FAM47EQ6ZV65 393 aa1.85□□□□□ -2.11
SMAD1-203ENST00000502342 VSIG1Q86XK7 387 aa1.85□□□□□ -2.11
SMAD1-203ENST00000502342 CCDC71Q8IV32 467 aaPredicted RBP1.85□□□□□ -2.11
SMAD1-203ENST00000502342 NAXDQ8IW45 347 aa1.85□□□□□ -2.11
SMAD1-203ENST00000502342 PRR22Q8IZ63 422 aa1.85□□□□□ -2.11
SMAD1-203ENST00000502342 NHLRC2Q8NBF2 726 aa1.85□□□□□ -2.11
SMAD1-203ENST00000502342 CLEC1AQ8NC01 280 aa1.85□□□□□ -2.11
SMAD1-203ENST00000502342 MRAPQ8TCY5 172 aa1.85□□□□□ -2.11
SMAD1-203ENST00000502342 SNRNP27Q8WVK2 155 aaKnown RBP1.85□□□□□ -2.11
SMAD1-203ENST00000502342 FAM162AQ96A26 154 aa1.85□□□□□ -2.11
SMAD1-203ENST00000502342 ZBED6CLQ96FA7 236 aaPredicted RBP1.85□□□□□ -2.11
SMAD1-203ENST00000502342 C16orf58Q96GQ5 468 aa1.85□□□□□ -2.11
SMAD1-203ENST00000502342 ERO1AQ96HE7 468 aa1.85□□□□□ -2.11
SMAD1-203ENST00000502342 PPP1R16AQ96I34 528 aa1.85□□□□□ -2.11
SMAD1-203ENST00000502342 CITED2Q99967 270 aaPredicted RBP1.85□□□□□ -2.11
SMAD1-203ENST00000502342 YTHDF1Q9BYJ9 559 aaKnown RBP1.85□□□□□ -2.11
SMAD1-203ENST00000502342 GPR173Q9NS66 373 aa1.85□□□□□ -2.11
SMAD1-203ENST00000502342 TMEM161AQ9NX61 479 aa1.85□□□□□ -2.11
SMAD1-203ENST00000502342 TERF2IPQ9NYB0 399 aa1.85□□□□□ -2.11
SMAD1-203ENST00000502342 PLEK2Q9NYT0 353 aa1.85□□□□□ -2.11
SMAD1-203ENST00000502342 VPS18Q9P253 973 aa1.85□□□□□ -2.11
SMAD1-203ENST00000502342 GIMAP2Q9UG22 337 aa1.85□□□□□ -2.11
SMAD1-203ENST00000502342 ARMCX3Q9UH62 379 aaPredicted RBP1.85□□□□□ -2.11
SMAD1-203ENST00000502342 ZNF256Q9Y2P7 627 aaPredicted RBP1.85□□□□□ -2.11
SMAD1-203ENST00000502342 SLC6A5Q9Y345 797 aa1.85□□□□□ -2.11
SMAD1-203ENST00000502342 MAGEB16A2A368 324 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 ZSCAN5CA6NGD5 496 aaPredicted RBP1.84□□□□□ -2.11
SMAD1-203ENST00000502342 ZNF724A8MTY0 619 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 ZNF487B1APH4 448 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 SYT7O43581 403 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 KIAA0513O60268 411 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 SIX3O95343 332 aaPredicted RBP1.84□□□□□ -2.11
SMAD1-203ENST00000502342 HSPA4LO95757 839 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 IGHG3P01860 377 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 FHP07954 510 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 SCG2P13521 617 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 HSD17B1P14061 328 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 CALML3P27482 149 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 CHRNA3P32297 505 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 IGLV3-21P80748 117 aaPredicted RBP1.84□□□□□ -2.11
SMAD1-203ENST00000502342 PTK6Q13882 451 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 SLC17A1Q14916 467 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 ACKR1Q16570 336 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 CAPN13Q6MZZ7 669 aaPredicted RBP1.84□□□□□ -2.11
SMAD1-203ENST00000502342 PODNL1Q6PEZ8 512 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 ABRAXAS1Q6UWZ7 409 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 SIGLEC15Q6ZMC9 328 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 ZNF600Q6ZNG1 722 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 MSANTD1Q6ZTZ1 278 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 THEM5Q8N1Q8 247 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 PARP8Q8N3A8 854 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 C11orf42Q8N5U0 333 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 CCDC197Q8NCU1 140 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 ICA1LQ8NDH6 482 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 SPATA18Q8TC71 538 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 TBCKQ8TEA7 893 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 AFAP1L1Q8TED9 768 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 SAP25Q8TEE9 199 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 PRCCQ92733 491 aaPredicted RBP1.84□□□□□ -2.11
SMAD1-203ENST00000502342 ESAMQ96AP7 390 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 SPATA17Q96L03 361 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 CCDC114Q96M63 670 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 MCCC1Q96RQ3 725 aaPredicted RBP1.84□□□□□ -2.11
SMAD1-203ENST00000502342 SERINC2Q96SA4 455 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 DPEP3Q9H4B8 488 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 SLCO1C1Q9NYB5 712 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 EIF3KQ9UBQ5 218 aaKnown RBP1.84□□□□□ -2.11
SMAD1-203ENST00000502342 GPR132Q9UNW8 380 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 ITM2BQ9Y287 266 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 KIF25-AS1Q9Y6Z4 181 aa1.84□□□□□ -2.11
SMAD1-203ENST00000502342 ACEP12821 1306 aa1.84□□□□□ -2.12
SMAD1-203ENST00000502342 FAM205AQ6ZU69 1335 aa1.84□□□□□ -2.12
SMAD1-203ENST00000502342 IGKV6D-21A0A0A0MT36 114 aa1.83□□□□□ -2.12
SMAD1-203ENST00000502342 SRRM4A7MD48 611 aaKnown RBP1.83□□□□□ -2.12
SMAD1-203ENST00000502342 FOXI3A8MTJ6 420 aaPredicted RBP1.83□□□□□ -2.12
SMAD1-203ENST00000502342 K7ERI5 159 aa1.83□□□□□ -2.12
SMAD1-203ENST00000502342 CCSO14618 274 aa1.83□□□□□ -2.12
SMAD1-203ENST00000502342 MCF2LO15068 1137 aa1.83□□□□□ -2.12
SMAD1-203ENST00000502342 TIMM44O43615 452 aa1.83□□□□□ -2.12
SMAD1-203ENST00000502342 ATP9AO75110 1047 aa1.83□□□□□ -2.12
SMAD1-203ENST00000502342 C8orf89P0DMQ9 161 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms