RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 IFT172Q9UG01 1749 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 SOWAHDA6NJG2 315 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 KIF28PB7ZC32 967 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 CCNT1O60563 726 aaKnown RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 FKBP6O75344 327 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 OR4F21O95013 312 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 LATS1O95835 1130 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 SNAI1O95863 264 aaPredicted RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 PLGP00747 810 aaPredicted RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 NGFP01138 241 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 IFNA10P01566 189 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 IFNA4P05014 189 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 UBTFL6P0CB48 400 aaPredicted RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 MED14OSP0DP75 135 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 POLR2CP19387 275 aaPredicted RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 MUTP22033 750 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 MAN1A1P33908 653 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 SLC26A3P40879 764 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 CDKN2BP42772 138 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 GCLMP48507 274 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 RAB5CP51148 216 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ZNF143P52747 638 aaPredicted RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 ERVK11-1P61568 191 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 AKAP17AQ02040 695 aaKnown RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 BNIP2Q12982 314 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 PDIA2Q13087 525 aaKnown RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 MTX1Q13505 466 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ACVR2BQ13705 512 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 GIT2Q14161 759 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ZNF79Q15937 498 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 PSMD5Q16401 504 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 SOWAHAQ2M3V2 549 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 KIF19Q2TAC6 998 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 EIF2S3LQ2VIR3 472 aaKnown RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 KRTAP24-1Q3LI83 254 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 TMEM69Q5SWH9 247 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 LRRC38Q5VT99 294 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 AADACL4Q5VUY2 407 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 IZUMO3Q5VZ72 239 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 OR4F3Q6IEY1 312 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ZFP1Q6P2D0 407 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 FAHD1Q6P587 224 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 FBXL19Q6PCT2 694 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ZDHHC24Q6UX98 284 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 TMC3Q7Z5M5 1100 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ZER1Q7Z7L7 766 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 HMGN2P46Q86SG4 172 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 BAP18Q8IXM2 172 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 CKAP2LQ8IYA6 745 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ULK2Q8IYT8 1036 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 MYOCDQ8IZQ8 938 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 TMEM156Q8N614 296 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 STPG4Q8N801 248 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 SLC16A11Q8NCK7 471 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 STOML3Q8TAV4 291 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 CCDC110Q8TBZ0 833 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 C8orf48Q96LL4 319 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 PHB2Q99623 299 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 THUMPD3Q9BV44 507 aaKnown RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 TEX101Q9BY14 249 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 NUAK2Q9H093 628 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 MTG2Q9H4K7 406 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 PRORYQ9H606 182 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ELAC1Q9H777 363 aaKnown RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 SH2D4AQ9H788 454 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 PLGRKTQ9HBL7 147 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ANKHQ9HCJ1 492 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 MRPL17Q9NRX2 175 aaKnown RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 ARGLU1Q9NWB6 273 aaPredicted RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 MRPL16Q9NX20 251 aaKnown RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 IMPAD1Q9NX62 359 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ZNF319Q9P2F9 582 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 DNAJB4Q9UDY4 337 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 SIX4Q9UIU6 781 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 AKT3Q9Y243 479 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 AP4S1Q9Y587 144 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 PCDHGB3Q9Y5G1 929 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 RPS6KL1Q9Y6S9 549 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 WDR17Q8IZU2 1322 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 NSD2O96028 1365 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 GLOD5A6NK44 160 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 SDR42E2A6NKP2 422 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ZNF705EA8MWA4 302 aaPredicted RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 TLR4O00206 839 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 TBX3O15119 743 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 SURF4O15260 269 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ZNF264O43296 627 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ECE2O60344 883 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 FZD6O60353 706 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 NME6O75414 186 aaPredicted RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 STC2O76061 302 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 BAG4O95429 457 aaKnown RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 MT-ND6P03923 174 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 CSF1RP07333 972 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 UMPSP11172 480 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 RNH1P13489 461 aaKnown RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 CTSEP14091 401 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 CREB1P16220 341 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ZFXP17010 805 aaPredicted RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 ZNF18P17022 549 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms