RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 SETDB1Q15047 1291 aa9.18□□□□□ -0.94
SRSF4-205ENST00000497015 PDK4Q16654 411 aa9.18□□□□□ -0.94
SRSF4-205ENST00000497015 TECRLQ5HYJ1 363 aa9.18□□□□□ -0.94
SRSF4-205ENST00000497015 H3F3CQ6NXT2 135 aa9.18□□□□□ -0.94
SRSF4-205ENST00000497015 TUBA3EQ6PEY2 450 aa9.18□□□□□ -0.94
SRSF4-205ENST00000497015 CLEC9AQ6UXN8 241 aa9.18□□□□□ -0.94
SRSF4-205ENST00000497015 RIPOR1Q6ZS17 1223 aa9.18□□□□□ -0.94
SRSF4-205ENST00000497015 VN1R4Q7Z5H5 301 aa9.18□□□□□ -0.94
SRSF4-205ENST00000497015 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.18□□□□□ -0.94
SRSF4-205ENST00000497015 ASPGQ86U10 573 aa9.18□□□□□ -0.94
SRSF4-205ENST00000497015 HRNRQ86YZ3 2850 aaPredicted RBP9.18□□□□□ -0.94
SRSF4-205ENST00000497015 OR4N4Q8N0Y3 316 aa9.18□□□□□ -0.94
SRSF4-205ENST00000497015 BEST3Q8N1M1 668 aa9.18□□□□□ -0.94
SRSF4-205ENST00000497015 KRT78Q8N1N4 520 aa9.18□□□□□ -0.94
SRSF4-205ENST00000497015 MREGQ8N565 214 aa9.18□□□□□ -0.94
SRSF4-205ENST00000497015 NT5CQ8TCD5 201 aa9.18□□□□□ -0.94
SRSF4-205ENST00000497015 AENQ8WTP8 325 aaKnown RBP9.18□□□□□ -0.94
SRSF4-205ENST00000497015 KCTD4Q8WVF5 259 aa9.18□□□□□ -0.94
SRSF4-205ENST00000497015 UBLCP1Q8WVY7 318 aaPredicted RBP9.18□□□□□ -0.94
SRSF4-205ENST00000497015 PTCD3Q96EY7 689 aaKnown RBP9.18□□□□□ -0.94
SRSF4-205ENST00000497015 VPS50Q96JG6 964 aa9.18□□□□□ -0.94
SRSF4-205ENST00000497015 C18orf12Q96KH6 178 aa9.18□□□□□ -0.94
SRSF4-205ENST00000497015 C10orf90Q96M02 699 aa9.18□□□□□ -0.94
SRSF4-205ENST00000497015 ALPK1Q96QP1 1244 aa9.18□□□□□ -0.94
SRSF4-205ENST00000497015 MRPL57Q9BQC6 102 aaKnown RBP9.18□□□□□ -0.94
SRSF4-205ENST00000497015 DRC3Q9H069 523 aa9.18□□□□□ -0.94
SRSF4-205ENST00000497015 ZNF700Q9H0M5 742 aa9.18□□□□□ -0.94
SRSF4-205ENST00000497015 VPS11Q9H270 941 aa9.18□□□□□ -0.94
SRSF4-205ENST00000497015 SYNPO2LQ9H987 977 aa9.18□□□□□ -0.94
SRSF4-205ENST00000497015 ZNF304Q9HCX3 659 aa9.18□□□□□ -0.94
SRSF4-205ENST00000497015 C14orf105Q9NVL8 296 aa9.18□□□□□ -0.94
SRSF4-205ENST00000497015 ANKRD10Q9NXR5 420 aa9.18□□□□□ -0.94
SRSF4-205ENST00000497015 RAB21Q9UL25 225 aa9.18□□□□□ -0.94
SRSF4-205ENST00000497015 RUVBL1Q9Y265 456 aaKnown RBP9.18□□□□□ -0.94
SRSF4-205ENST00000497015 AKAP6Q13023 2319 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 CSPG4Q6UVK1 2322 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 COL6A5A8TX70 2615 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 IGHV3-20A0A0C4DH32 117 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 NCF1BA6NI72 391 aaPredicted RBP9.17□□□□□ -0.94
SRSF4-205ENST00000497015 A8MUI8 341 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 NCF1CA8MVU1 366 aaPredicted RBP9.17□□□□□ -0.94
SRSF4-205ENST00000497015 IDSB3KWA1 339 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 SUPT3HB4E1H0 165 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 STX16-NPEPL1H3BU86 382 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 K7EPI3 171 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 STX16O14662 325 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 PDPK1O15530 556 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 SUPT3HO75486 399 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 EIF2S1P05198 315 aaKnown RBP9.17□□□□□ -0.94
SRSF4-205ENST00000497015 TPOP07202 933 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 INHBBP09529 407 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 NCF1P14598 390 aaPredicted RBP9.17□□□□□ -0.94
SRSF4-205ENST00000497015 IL10P22301 178 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 PTGER1P34995 402 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 BCL6P41182 706 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 KCNC1P48547 511 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 HSPA7P48741 367 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 NAA20P61599 178 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 IRF9Q00978 393 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 ZNF33BQ06732 778 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 RGS1Q08116 209 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 HERC3Q15034 1050 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 PCBP2Q15366 365 aaKnown RBP eCLIP9.17□□□□□ -0.94
SRSF4-205ENST00000497015 EMC4Q5J8M3 183 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 PAGE2BQ5JRK9 111 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 ABHD17BQ5VST6 288 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 TMEM205Q6UW68 189 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 SLCO4C1Q6ZQN7 724 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 TMPRSS11BQ86T26 416 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 ZNF227Q86WZ6 799 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 GSPT2Q8IYD1 628 aaKnown RBP9.17□□□□□ -0.94
SRSF4-205ENST00000497015 LILRB2Q8N423 598 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 SPATA6LQ8N4H0 392 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 SUN3Q8TAQ9 357 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 UHMK1Q8TAS1 419 aaKnown RBP9.17□□□□□ -0.94
SRSF4-205ENST00000497015 SLC13A3Q8WWT9 602 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 UBE2E3Q969T4 207 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 KCTD12Q96CX2 325 aaKnown RBP9.17□□□□□ -0.94
SRSF4-205ENST00000497015 MBD6Q96DN6 1003 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 GPATCH1Q9BRR8 931 aaKnown RBP9.17□□□□□ -0.94
SRSF4-205ENST00000497015 C1QTNF3Q9BXJ4 246 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 POLDIP3Q9BY77 421 aaKnown RBP9.17□□□□□ -0.94
SRSF4-205ENST00000497015 ROPN1BQ9BZX4 212 aaPredicted RBP9.17□□□□□ -0.94
SRSF4-205ENST00000497015 MRPL46Q9H2W6 279 aaKnown RBP9.17□□□□□ -0.94
SRSF4-205ENST00000497015 ROPN1Q9HAT0 212 aaPredicted RBP9.17□□□□□ -0.94
SRSF4-205ENST00000497015 ABCF3Q9NUQ8 709 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 COQ3Q9NZJ6 369 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 LRFN1Q9P244 771 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 OPTCQ9UBM4 332 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 ZNF282Q9UDV7 671 aaPredicted RBP9.17□□□□□ -0.94
SRSF4-205ENST00000497015 DCDC2Q9UHG0 476 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 ADGRE2Q9UHX3 823 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 SH2B3Q9UQQ2 575 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 TSC22D4Q9Y3Q8 395 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 L3MBTL1Q9Y468 752 aa9.17□□□□□ -0.94
SRSF4-205ENST00000497015 SCN2AQ99250 2005 aa9.16□□□□□ -0.94
SRSF4-205ENST00000497015 RNF223E7ERA6 249 aa9.16□□□□□ -0.94
SRSF4-205ENST00000497015 UBXN8O00124 270 aa9.16□□□□□ -0.94
SRSF4-205ENST00000497015 OR1F1O43749 312 aa9.16□□□□□ -0.94
SRSF4-205ENST00000497015 LCMT2O60294 686 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms