RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 OR52A4PA6NMU1 304 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 C2orf74A8MZ97 194 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 ACOX3O15254 700 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 ERI3O43414 337 aaKnown RBP6.58□□□□□ -1.36
USP39-219ENST00000496047 MBTPS2O43462 519 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 ICMTO60725 284 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 DPM1O60762 260 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 NDUFS2O75306 463 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 SEC24DO94855 1032 aaPredicted RBP6.58□□□□□ -1.36
USP39-219ENST00000496047 PGM3O95394 542 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 C9P02748 559 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 GBAP04062 536 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 ALPLP05186 524 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 CHRM5P08912 532 aaPredicted RBP6.58□□□□□ -1.36
USP39-219ENST00000496047 LINGO3P0C6S8 592 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 ITGAMP11215 1152 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 GABRG2P18507 467 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 POU3F3P20264 500 aaPredicted RBP6.58□□□□□ -1.36
USP39-219ENST00000496047 EEF1B2P24534 225 aaKnown RBP6.58□□□□□ -1.36
USP39-219ENST00000496047 TLX1P31314 330 aaPredicted RBP6.58□□□□□ -1.36
USP39-219ENST00000496047 IFNA8P32881 189 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 BSGP35613 385 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 SMIM11AP58511 58 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 GABARAPL2P60520 117 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 HPCAP84074 193 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 PRR5P85299 388 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 CDK6Q00534 326 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 IL1RL1Q01638 556 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 HSPB3Q12988 150 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 GAB1Q13480 694 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 APOFQ13790 326 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 COL19A1Q14993 1142 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 CLCA4Q14CN2 919 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 CYBRD1Q53TN4 286 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 ZNF385BQ569K4 471 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 PRRT3Q5FWE3 981 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 ZC3H12BQ5HYM0 836 aaKnown RBP6.58□□□□□ -1.36
USP39-219ENST00000496047 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.58□□□□□ -1.36
USP39-219ENST00000496047 RNF220Q5VTB9 566 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 ADNP2Q6IQ32 1131 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 REEP3Q6NUK4 255 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 NIPAL1Q6NVV3 410 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 KLHL35Q6PF15 583 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 SLC30A9Q6PML9 568 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 XKR5Q6UX68 686 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 CCDC80Q76M96 950 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 ABHD13Q7L211 337 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 GPR155Q7Z3F1 870 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 PIWIL3Q7Z3Z3 882 aaKnown RBP6.58□□□□□ -1.36
USP39-219ENST00000496047 GPR141Q7Z602 305 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 THAP5Q7Z6K1 395 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 ASPGQ86U10 573 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 PTOV1Q86YD1 416 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 ARMC8Q8IUR7 673 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 TAGAPQ8N103 731 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 ANKRD53Q8N9V6 530 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 LMNTD1Q8N9Z9 388 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 ATG16L2Q8NAA4 619 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 TMEM145Q8NBT3 493 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 CAMKVQ8NCB2 501 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 ZNF740Q8NDX6 193 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 TSTD1Q8NFU3 115 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 OR56A1Q8NGH5 318 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 OR2A1Q8NGT9 310 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 NFKBIDQ8NI38 313 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.58□□□□□ -1.36
USP39-219ENST00000496047 OR1E3Q8WZA6 343 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 NR4A3Q92570 626 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 PROX1Q92786 737 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 EZH1Q92800 747 aaPredicted RBP6.58□□□□□ -1.36
USP39-219ENST00000496047 RERGQ96A58 199 aaPredicted RBP6.58□□□□□ -1.36
USP39-219ENST00000496047 CIDECQ96AQ7 238 aaPredicted RBP6.58□□□□□ -1.36
USP39-219ENST00000496047 EXOSC8Q96B26 276 aaKnown RBP6.58□□□□□ -1.36
USP39-219ENST00000496047 NEURL3Q96EH8 262 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 PDXPQ96GD0 296 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 SHDQ96IW2 340 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 F2RL3Q96RI0 385 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 EPYCQ99645 322 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 C17orf62Q9BQA9 187 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 DPH7Q9BTV6 452 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 MENTQ9BUN1 341 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 SARGQ9BW04 601 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 TRIM4Q9C037 500 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 SLC6A17Q9H1V8 727 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 TTYH1Q9H313 450 aaPredicted RBP6.58□□□□□ -1.36
USP39-219ENST00000496047 XKR8Q9H6D3 395 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 DDX31Q9H8H2 851 aaKnown RBP6.58□□□□□ -1.36
USP39-219ENST00000496047 C3orf14Q9HBI5 128 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 PRDM8Q9NQV8 689 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 SLC2A4RGQ9NR83 387 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 KRT84Q9NSB2 600 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 SLC6A13Q9NSD5 602 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 MS4A12Q9NXJ0 267 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 CALML5Q9NZT1 146 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 TAAR2Q9P1P5 351 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 USP36Q9P275 1121 aaKnown RBP6.58□□□□□ -1.36
USP39-219ENST00000496047 UTS2RQ9UKP6 389 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 PCOLCE2Q9UKZ9 415 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 NDRG2Q9UN36 371 aaKnown RBP6.58□□□□□ -1.36
USP39-219ENST00000496047 WDR37Q9Y2I8 494 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms