RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 NLE1Q9NVX2 485 aaPredicted RBP8.8□□□□□ -1
SMARCAL1-213ENST00000496037 FEZ2Q9UHY8 353 aaPredicted RBP8.8□□□□□ -1
SMARCAL1-213ENST00000496037 MYO6Q9UM54 1294 aa8.8□□□□□ -1
SMARCAL1-213ENST00000496037 RUVBL2Q9Y230 463 aaKnown RBP8.8□□□□□ -1
SMARCAL1-213ENST00000496037 ATG4BQ9Y4P1 393 aa8.8□□□□□ -1
SMARCAL1-213ENST00000496037 RAI1Q7Z5J4 1906 aaPredicted RBP8.8□□□□□ -1
SMARCAL1-213ENST00000496037 KMT2CQ8NEZ4 4911 aaKnown RBP8.79□□□□□ -1
SMARCAL1-213ENST00000496037 PRKDCP78527 4128 aaKnown RBP8.79□□□□□ -1
SMARCAL1-213ENST00000496037 TCRBV16S1A1N1A0A5B0 115 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 LRRC53A6NM62 1247 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 ZNF839A8K0R7 811 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 LGALS16A8MUM7 142 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 M0R3H8 397 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 WWP2O00308 870 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 TCF21O43680 179 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 GPRIN2O60269 458 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 PROSCO94903 275 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 MAOAP21397 527 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 ACVR1BP36896 505 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 NR2C2P49116 596 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 SESN3P58005 492 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 RPS15AP62244 130 aaKnown RBP8.79□□□□□ -1
SMARCAL1-213ENST00000496037 ABATP80404 500 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 ZBED6P86452 979 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 CRYZQ08257 329 aaKnown RBP8.79□□□□□ -1
SMARCAL1-213ENST00000496037 KLHL30Q0D2K2 578 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 DUSP8Q13202 625 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 RCAN2Q14206 197 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 PRPSAP1Q14558 356 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 HERC3Q15034 1050 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 TERF2Q15554 542 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 TMEM249Q2WGJ8 235 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 FAM174BQ3ZCQ3 159 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 HECTD2Q5U5R9 776 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 ITPRIPL1Q6GPH6 555 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 PGM2L1Q6PCE3 622 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 ZNF704Q6ZNC4 412 aaPredicted RBP8.79□□□□□ -1
SMARCAL1-213ENST00000496037 VN1R4Q7Z5H5 301 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 VSIG1Q86XK7 387 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 C3orf56Q8N813 242 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 LKAAEAR1Q8TD35 194 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 NCLNQ969V3 563 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 PPP1R14AQ96A00 147 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 ZC3HAV1LQ96H79 300 aaKnown RBP8.79□□□□□ -1
SMARCAL1-213ENST00000496037 DHRS1Q96LJ7 313 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 ZFP3Q96NJ6 502 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 QRFPRQ96P65 431 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 SLC30A3Q99726 388 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 PRDM14Q9GZV8 571 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 LIN28AQ9H9Z2 209 aaKnown RBP8.79□□□□□ -1
SMARCAL1-213ENST00000496037 SH2D2AQ9NP31 389 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 SEMA4BQ9NPR2 832 aaPredicted RBP8.79□□□□□ -1
SMARCAL1-213ENST00000496037 QPCTLQ9NXS2 382 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 MYOTQ9UBF9 498 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 LAMP3Q9UQV4 416 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 GPR52Q9Y2T5 361 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 AAR2Q9Y312 384 aaKnown RBP8.79□□□□□ -1
SMARCAL1-213ENST00000496037 PCDHA13Q9Y5I0 950 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 TENM1Q9UKZ4 2725 aa8.79□□□□□ -1
SMARCAL1-213ENST00000496037 RYR3Q15413 4870 aa8.78□□□□□ -1
SMARCAL1-213ENST00000496037 C3orf70A6NLC5 250 aaPredicted RBP8.78□□□□□ -1
SMARCAL1-213ENST00000496037 IQCF5A8MTL0 148 aa8.78□□□□□ -1
SMARCAL1-213ENST00000496037 PSMD12O00232 456 aaPredicted RBP8.78□□□□□ -1
SMARCAL1-213ENST00000496037 ADAM11O75078 769 aa8.78□□□□□ -1
SMARCAL1-213ENST00000496037 AVILO75366 819 aa8.78□□□□□ -1
SMARCAL1-213ENST00000496037 MBD3O95983 291 aa8.78□□□□□ -1
SMARCAL1-213ENST00000496037 SLC35G6P0C7Q6 338 aa8.78□□□□□ -1
SMARCAL1-213ENST00000496037 CCL3P10147 92 aa8.78□□□□□ -1
SMARCAL1-213ENST00000496037 CREB1P16220 341 aa8.78□□□□□ -1
SMARCAL1-213ENST00000496037 HNF1AP20823 631 aa8.78□□□□□ -1
SMARCAL1-213ENST00000496037 GDF1P27539 372 aa8.78□□□□□ -1
SMARCAL1-213ENST00000496037 ADRA1AP35348 466 aa8.78□□□□□ -1
SMARCAL1-213ENST00000496037 PIGAP37287 484 aa8.78□□□□□ -1
SMARCAL1-213ENST00000496037 BTG2P78543 158 aa8.78□□□□□ -1
SMARCAL1-213ENST00000496037 GABPB1Q06547 395 aaPredicted RBP8.78□□□□□ -1
SMARCAL1-213ENST00000496037 MSLNQ13421 630 aaPredicted RBP8.78□□□□□ -1
SMARCAL1-213ENST00000496037 SQLEQ14534 574 aa8.78□□□□□ -1
SMARCAL1-213ENST00000496037 PHKG1Q16816 387 aa8.78□□□□□ -1
SMARCAL1-213ENST00000496037 P3H1Q32P28 736 aa8.78□□□□□ -1
SMARCAL1-213ENST00000496037 ANKRD20A4Q4UJ75 823 aa8.78□□□□□ -1
SMARCAL1-213ENST00000496037 XKR6Q5GH73 641 aa8.78□□□□□ -1
SMARCAL1-213ENST00000496037 ANKRD20A2Q5SQ80 823 aa8.78□□□□□ -1
SMARCAL1-213ENST00000496037 THEMIS2Q5TEJ8 643 aa8.78□□□□□ -1
SMARCAL1-213ENST00000496037 ANKRD20A1Q5TYW2 823 aa8.78□□□□□ -1
SMARCAL1-213ENST00000496037 ANKRD20A3Q5VUR7 823 aa8.78□□□□□ -1
SMARCAL1-213ENST00000496037 SYDE1Q6ZW31 735 aaPredicted RBP8.78□□□□□ -1
SMARCAL1-213ENST00000496037 ZNF611Q8N823 705 aa8.78□□□□□ -1
SMARCAL1-213ENST00000496037 C9orf106Q8NAJ2 232 aa8.78□□□□□ -1
SMARCAL1-213ENST00000496037 KCT2Q8NC54 265 aa8.78□□□□□ -1
SMARCAL1-213ENST00000496037 OR9A1PQ8NGU1 263 aa8.78□□□□□ -1
SMARCAL1-213ENST00000496037 STYXQ8WUJ0 223 aa8.78□□□□□ -1
SMARCAL1-213ENST00000496037 HDAC2Q92769 488 aaKnown RBP8.78□□□□□ -1
SMARCAL1-213ENST00000496037 ART5Q96L15 291 aa8.78□□□□□ -1
SMARCAL1-213ENST00000496037 JSRP1Q96MG2 331 aaPredicted RBP8.78□□□□□ -1
SMARCAL1-213ENST00000496037 FAM111AQ96PZ2 611 aa8.78□□□□□ -1
SMARCAL1-213ENST00000496037 PANX2Q96RD6 677 aa8.78□□□□□ -1
SMARCAL1-213ENST00000496037 ERGIC2Q96RQ1 377 aa8.78□□□□□ -1
SMARCAL1-213ENST00000496037 TIMP4Q99727 224 aa8.78□□□□□ -1
SMARCAL1-213ENST00000496037 TBL1YQ9BQ87 522 aa8.78□□□□□ -1
SMARCAL1-213ENST00000496037 CARD6Q9BX69 1037 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms