RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 SSR4P51571 173 aa22.55■■□□□ 1.2
HLA-C-209ENST00000495835 CASP6P55212 293 aa22.55■■□□□ 1.2
HLA-C-209ENST00000495835 DDX39BQ13838 428 aaKnown RBP22.55■■□□□ 1.2
HLA-C-209ENST00000495835 C1QL3Q5VWW1 255 aa22.55■■□□□ 1.2
HLA-C-209ENST00000495835 BNC2Q6ZN30 1099 aaPredicted RBP22.55■■□□□ 1.2
HLA-C-209ENST00000495835 TRMT10CQ7L0Y3 403 aaKnown RBP22.55■■□□□ 1.2
HLA-C-209ENST00000495835 GPR180Q86V85 440 aa22.55■■□□□ 1.2
HLA-C-209ENST00000495835 PTGR2Q8N8N7 351 aaPredicted RBP22.55■■□□□ 1.2
HLA-C-209ENST00000495835 WDR20Q8TBZ3 569 aa22.55■■□□□ 1.2
HLA-C-209ENST00000495835 MRPL57Q9BQC6 102 aaKnown RBP22.55■■□□□ 1.2
HLA-C-209ENST00000495835 ZNF358Q9NW07 568 aa22.55■■□□□ 1.2
HLA-C-209ENST00000495835 LYARQ9NX58 379 aaKnown RBP22.55■■□□□ 1.2
HLA-C-209ENST00000495835 MYOTQ9UBF9 498 aa22.55■■□□□ 1.2
HLA-C-209ENST00000495835 SUCOQ9UBS9 1254 aaKnown RBP22.55■■□□□ 1.2
HLA-C-209ENST00000495835 ZNF835Q9Y2P0 537 aa22.55■■□□□ 1.2
HLA-C-209ENST00000495835 CRYBG3Q68DQ2 2970 aa22.54■■□□□ 1.2
HLA-C-209ENST00000495835 LDB3O75112 727 aa22.54■■□□□ 1.2
HLA-C-209ENST00000495835 SIX3O95343 332 aaPredicted RBP22.54■■□□□ 1.2
HLA-C-209ENST00000495835 SNRPAP09012 282 aaKnown RBP22.54■■□□□ 1.2
HLA-C-209ENST00000495835 COX7A2P14406 83 aa22.54■■□□□ 1.2
HLA-C-209ENST00000495835 TNNI3P19429 210 aa22.54■■□□□ 1.2
HLA-C-209ENST00000495835 BUD31P41223 144 aaPredicted RBP22.54■■□□□ 1.2
HLA-C-209ENST00000495835 RPS13P62277 151 aaKnown RBP22.54■■□□□ 1.2
HLA-C-209ENST00000495835 CPSF6Q16630 551 aaKnown RBP eCLIP22.54■■□□□ 1.2
HLA-C-209ENST00000495835 Q6ZPB1 254 aaPredicted RBP22.54■■□□□ 1.2
HLA-C-209ENST00000495835 LCA5Q86VQ0 697 aa22.54■■□□□ 1.2
HLA-C-209ENST00000495835 SIAH3Q8IW03 269 aa22.54■■□□□ 1.2
HLA-C-209ENST00000495835 SLC34A3Q8N130 599 aa22.54■■□□□ 1.2
HLA-C-209ENST00000495835 CYP4Z2PQ8N1L4 340 aa22.54■■□□□ 1.2
HLA-C-209ENST00000495835 ATP6V1E2Q96A05 226 aa22.54■■□□□ 1.2
HLA-C-209ENST00000495835 ANKRD9Q96BM1 317 aaPredicted RBP22.54■■□□□ 1.2
HLA-C-209ENST00000495835 MTBPQ96DY7 904 aa22.54■■□□□ 1.2
HLA-C-209ENST00000495835 RPF2Q9H7B2 306 aaKnown RBP22.54■■□□□ 1.2
HLA-C-209ENST00000495835 NOL11Q9H8H0 719 aaKnown RBP22.54■■□□□ 1.2
HLA-C-209ENST00000495835 DDX31Q9H8H2 851 aaKnown RBP22.54■■□□□ 1.2
HLA-C-209ENST00000495835 RNF11Q9Y3C5 154 aa22.54■■□□□ 1.2
HLA-C-209ENST00000495835 MYO7BQ6PIF6 2116 aa22.54■■□□□ 1.2
HLA-C-209ENST00000495835 TRGV8A0A0C4DH27 118 aa22.53■■□□□ 1.2
HLA-C-209ENST00000495835 LRRC14BA6NHZ5 514 aa22.53■■□□□ 1.2
HLA-C-209ENST00000495835 TMEM200CA6NKL6 621 aa22.53■■□□□ 1.2
HLA-C-209ENST00000495835 C17orf105B2RV13 164 aa22.53■■□□□ 1.2
HLA-C-209ENST00000495835 TRIM49D1C9J1S8 452 aa22.53■■□□□ 1.2
HLA-C-209ENST00000495835 SAP18O00422 153 aaKnown RBP22.53■■□□□ 1.2
HLA-C-209ENST00000495835 ASNA1O43681 348 aa22.53■■□□□ 1.2
HLA-C-209ENST00000495835 DYRK3O43781 588 aa22.53■■□□□ 1.2
HLA-C-209ENST00000495835 SLC19A2O60779 497 aa22.53■■□□□ 1.2
HLA-C-209ENST00000495835 SH3BGRLO75368 114 aa22.53■■□□□ 1.2
HLA-C-209ENST00000495835 ST13P50502 369 aaKnown RBP22.53■■□□□ 1.2
HLA-C-209ENST00000495835 CCNG1P51959 295 aa22.53■■□□□ 1.2
HLA-C-209ENST00000495835 TIFABQ6ZNK6 161 aa22.53■■□□□ 1.2
HLA-C-209ENST00000495835 OR5L2Q8NGL0 311 aa22.53■■□□□ 1.2
HLA-C-209ENST00000495835 PHF21BQ96EK2 531 aa22.53■■□□□ 1.2
HLA-C-209ENST00000495835 SCYL1Q96KG9 808 aa22.53■■□□□ 1.2
HLA-C-209ENST00000495835 MRPL46Q9H2W6 279 aaKnown RBP22.53■■□□□ 1.2
HLA-C-209ENST00000495835 TIMMDC1Q9NPL8 285 aa22.53■■□□□ 1.2
HLA-C-209ENST00000495835 XPR1Q9UBH6 696 aa22.53■■□□□ 1.2
HLA-C-209ENST00000495835 CENPEQ02224 2701 aa22.52■■□□□ 1.2
HLA-C-209ENST00000495835 CELSR2Q9HCU4 2923 aa22.52■■□□□ 1.2
HLA-C-209ENST00000495835 EXOC1LA0A1B0GW35 172 aa22.52■■□□□ 1.2
HLA-C-209ENST00000495835 OR7A17O14581 309 aa22.52■■□□□ 1.2
HLA-C-209ENST00000495835 PROM1O43490 865 aa22.52■■□□□ 1.2
HLA-C-209ENST00000495835 ZG16O60844 167 aa22.52■■□□□ 1.2
HLA-C-209ENST00000495835 SEMA3DO95025 777 aa22.52■■□□□ 1.2
HLA-C-209ENST00000495835 ZNF24P17028 368 aa22.52■■□□□ 1.2
HLA-C-209ENST00000495835 BSGP35613 385 aa22.52■■□□□ 1.2
HLA-C-209ENST00000495835 STT3AP46977 705 aa22.52■■□□□ 1.2
HLA-C-209ENST00000495835 TNFRSF17Q02223 184 aa22.52■■□□□ 1.2
HLA-C-209ENST00000495835 MRM1Q6IN84 353 aaKnown RBP22.52■■□□□ 1.2
HLA-C-209ENST00000495835 GHDCQ8N2G8 530 aa22.52■■□□□ 1.2
HLA-C-209ENST00000495835 MYRIPQ8NFW9 859 aa22.52■■□□□ 1.2
HLA-C-209ENST00000495835 C16orf52Q8NHV5 167 aa22.52■■□□□ 1.2
HLA-C-209ENST00000495835 SLC2A12Q8TD20 617 aa22.52■■□□□ 1.2
HLA-C-209ENST00000495835 RBM18Q96H35 190 aaKnown RBP22.52■■□□□ 1.2
HLA-C-209ENST00000495835 ART5Q96L15 291 aa22.52■■□□□ 1.2
HLA-C-209ENST00000495835 SERPINI1Q99574 410 aa22.52■■□□□ 1.2
HLA-C-209ENST00000495835 PELOQ9BRX2 385 aaKnown RBP22.52■■□□□ 1.2
HLA-C-209ENST00000495835 ZNF717Q9BY31 904 aaPredicted RBP22.52■■□□□ 1.2
HLA-C-209ENST00000495835 COPS7AQ9UBW8 275 aa22.52■■□□□ 1.2
HLA-C-209ENST00000495835 PCTPQ9UKL6 214 aa22.52■■□□□ 1.2
HLA-C-209ENST00000495835 NFU1Q9UMS0 254 aa22.52■■□□□ 1.2
HLA-C-209ENST00000495835 A8MVJ9 347 aa22.51■■□□□ 1.19
HLA-C-209ENST00000495835 NPIPA5E9PKD4 350 aa22.51■■□□□ 1.19
HLA-C-209ENST00000495835 CCL21O00585 134 aa22.51■■□□□ 1.19
HLA-C-209ENST00000495835 PRKNO60260 465 aaPredicted RBP22.51■■□□□ 1.19
HLA-C-209ENST00000495835 GGTA1PQ4G0N0 100 aa22.51■■□□□ 1.19
HLA-C-209ENST00000495835 ADGRD1Q6QNK2 874 aa22.51■■□□□ 1.19
HLA-C-209ENST00000495835 RPTNQ6XPR3 784 aa22.51■■□□□ 1.19
HLA-C-209ENST00000495835 SPPL2CQ8IUH8 684 aa22.51■■□□□ 1.19
HLA-C-209ENST00000495835 SULF2Q8IWU5 870 aa22.51■■□□□ 1.19
HLA-C-209ENST00000495835 RNF175Q8N4F7 328 aa22.51■■□□□ 1.19
HLA-C-209ENST00000495835 ZFP62Q8NB50 900 aaPredicted RBP22.51■■□□□ 1.19
HLA-C-209ENST00000495835 MAGED4Q96JG8 741 aa22.51■■□□□ 1.19
HLA-C-209ENST00000495835 DGAT2Q96PD7 388 aa22.51■■□□□ 1.19
HLA-C-209ENST00000495835 C1QTNF3Q9BXJ4 246 aa22.51■■□□□ 1.19
HLA-C-209ENST00000495835 OR8D2Q9GZM6 311 aa22.51■■□□□ 1.19
HLA-C-209ENST00000495835 HPF1Q9NWY4 346 aa22.51■■□□□ 1.19
HLA-C-209ENST00000495835 FETUBQ9UGM5 382 aa22.51■■□□□ 1.19
HLA-C-209ENST00000495835 NPIPA1Q9UND3 350 aa22.51■■□□□ 1.19
HLA-C-209ENST00000495835 ATG4BQ9Y4P1 393 aa22.51■■□□□ 1.19
HLA-C-209ENST00000495835 CROCCQ5TZA2 2017 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms