RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 TPP2P29144 1249 aaPredicted RBP11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 PGDP52209 483 aa11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 HNRNPFP52597 415 aaKnown RBP11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 EFNA3P52797 238 aa11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 WDR4P57081 412 aaKnown RBP11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 RAPSNQ13702 412 aa11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 LY6DQ14210 128 aa11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 PCOLCEQ15113 449 aa11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 BTBD16Q32M84 506 aa11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 TTMPQ5BVD1 217 aa11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 C18orf63Q68DL7 685 aa11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 MRM1Q6IN84 353 aaKnown RBP11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 PAPD4Q6PIY7 484 aaKnown RBP11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 SCUBE1Q8IWY4 988 aa11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 TMEM52Q8NDY8 209 aa11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 FDCSPQ8NFU4 85 aa11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 OR6Y1Q8NGX8 325 aa11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 C9orf43Q8TAL5 461 aaPredicted RBP11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 DYDC1Q8WWB3 177 aa11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 ABHD17AQ96GS6 310 aa11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 APIPQ96GX9 242 aa11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 METTL2AQ96IZ6 378 aaKnown RBP11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 THOC3Q96J01 351 aaKnown RBP11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 MESP1Q9BRJ9 268 aa11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 FAIM2Q9BWQ8 316 aa11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 ALOXE3Q9BYJ1 711 aa11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 LHPPQ9H008 270 aa11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 ZDHHC2Q9UIJ5 367 aa11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 MCM8Q9UJA3 840 aa11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 RAP2CQ9Y3L5 183 aa11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 PCDHGA9Q9Y5G4 932 aaKnown RBP11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 DNAJC15Q9Y5T4 150 aa11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 A0A1W2PR48 441 aa11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 C1orf226A1L170 272 aa11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 A8MUA0 341 aa11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 TMEM233B4DJY2 109 aa11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 MASP2O00187 686 aa11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 ITM2AO43736 263 aa11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 DYRK3O43781 588 aa11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 LDB3O75112 727 aa11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 LYPLA1O75608 230 aaPredicted RBP11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 SASH3O75995 380 aa11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 SERPINA7P05543 415 aa11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 COX7A2P14406 83 aa11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 TIA1P31483 386 aaKnown RBP eCLIP11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 GSTM5P46439 218 aa11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 RPL14P50914 215 aaKnown RBP11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 SOX8P57073 446 aa11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 TRA2BP62995 288 aaKnown RBP11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 MYBPC3Q14896 1274 aa11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 NR6A1Q15406 480 aa11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 LACTB2Q53H82 288 aaPredicted RBP11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 HSP90B2PQ58FF3 399 aa11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 NDUFAF5Q5TEU4 345 aa11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 AGAP7PQ5VUJ5 663 aa11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 OR52E8Q6IFG1 317 aa11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 RIPOR1Q6ZS17 1223 aa11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 RNF165Q6ZSG1 346 aa11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 FAM76AQ8TAV0 307 aa11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 RAB3IL1Q8TBN0 382 aa11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 SLC39A7Q92504 469 aa11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 RBM18Q96H35 190 aaKnown RBP11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 AGAP4Q96P64 663 aa11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 DGAT2Q96PD7 388 aa11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 SLC25A18Q9H1K4 315 aa11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 MANSC1Q9H8J5 431 aa11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 ADAP2Q9NPF8 381 aa11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 C1orf109Q9NX04 203 aa11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 PSME2Q9UL46 239 aa11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 CLCA3PQ9Y6N3 262 aa11.33□□□□□ -0.6
CSNK1E-213ENST00000495232 PCSK5Q92824 1860 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 PIEZO2Q9H5I5 2752 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 IGKV3D-11A0A0A0MRZ8 115 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 SAGE2PA6NJ88 616 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 GLOD5A6NK44 160 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 PIP5K1BO14986 540 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 OR10H2O60403 315 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 SKAP2O75563 359 aaPredicted RBP11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 PRKRAO75569 313 aaKnown RBP11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 CEACAM4O75871 244 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 GPR75O95800 540 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 AIFM1O95831 613 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 ANXA4P09525 319 aaPredicted RBP11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 PRR35P0CG20 571 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 PIK3R1P27986 724 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 ALDH9A1P49189 494 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 TAS2R50P59544 299 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 PPP2R2AP63151 447 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 ID2Q02363 134 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 FOLH1Q04609 750 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 BST1Q10588 318 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 HEPACAMQ14CZ8 416 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 ELAVL1Q15717 326 aaKnown RBP11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 GALNTL6Q49A17 601 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 PLAG1Q6DJT9 500 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 TCTN3Q6NUS6 607 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 JMJD6Q6NYC1 403 aaPredicted RBP11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 GALNT18Q6P9A2 607 aa11.32□□□□□ -0.6
CSNK1E-213ENST00000495232 OR4N5Q8IXE1 308 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms