RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 OR2J2O76002 312 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 SIX3O95343 332 aaPredicted RBP8.92□□□□□ -0.98
MSH5-218ENST00000494646 ETHE1O95571 254 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 ACSL3O95573 720 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 ABOP16442 354 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 ZNF24P17028 368 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 PTGER1P34995 402 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 PHBP35232 272 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 SSR2P43308 183 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 SSR4P51571 173 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 NR0B1P51843 470 aaKnown RBP8.92□□□□□ -0.98
MSH5-218ENST00000494646 NEK2P51955 445 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 ADORA2A-AS1P86434 159 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 GTF2H2Q13888 395 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 E2F2Q14209 437 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 SETDB1Q15047 1291 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 ACAP2Q15057 778 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 ELAVL1Q15717 326 aaKnown RBP8.92□□□□□ -0.98
MSH5-218ENST00000494646 CPSF6Q16630 551 aaKnown RBP eCLIP8.92□□□□□ -0.98
MSH5-218ENST00000494646 TMEM35AQ53FP2 167 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 KHDRBS2Q5VWX1 349 aaKnown RBP8.92□□□□□ -0.98
MSH5-218ENST00000494646 C18orf63Q68DL7 685 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 GRHL2Q6ISB3 625 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 GTF2H2CQ6P1K8 395 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 HSDL2Q6YN16 418 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 DGAT2L6Q6ZPD8 337 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 GHDCQ8N2G8 530 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 NOA1Q8NC60 698 aaKnown RBP8.92□□□□□ -0.98
MSH5-218ENST00000494646 MORN4Q8NDC4 146 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 RHEBL1Q8TAI7 183 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 DAZLQ92904 295 aaKnown RBP8.92□□□□□ -0.98
MSH5-218ENST00000494646 UCN3Q969E3 161 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 ATP6V1E2Q96A05 226 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 MARVELD3Q96A59 401 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 RGMAQ96B86 450 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 ANKRD9Q96BM1 317 aaPredicted RBP8.92□□□□□ -0.98
MSH5-218ENST00000494646 PHF21BQ96EK2 531 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 GPR78Q96P69 363 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 CDK15Q96Q40 435 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 ROGDIQ9GZN7 287 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 DEFB127Q9H1M4 99 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 CDC42EP4Q9H3Q1 356 aaKnown RBP8.92□□□□□ -0.98
MSH5-218ENST00000494646 OCEL1Q9H607 264 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 IPPKQ9H8X2 491 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 ACTR8Q9H981 624 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 LYRM4Q9HD34 91 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 MTRF1LQ9UGC7 380 aaKnown RBP8.92□□□□□ -0.98
MSH5-218ENST00000494646 PPIEQ9UNP9 301 aaKnown RBP8.92□□□□□ -0.98
MSH5-218ENST00000494646 ZNF835Q9Y2P0 537 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 YARS2Q9Y2Z4 477 aaKnown RBP8.92□□□□□ -0.98
MSH5-218ENST00000494646 SPACA6W5XKT8 324 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 NCKAP5O14513 1909 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 CACNA1CQ13936 2221 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 A0A1B0GTH9 108 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 PINLYPA6NC86 204 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 A8MVJ9 347 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 HRKO00198 91 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 PLPP1O14494 284 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 TFECO14948 347 aaPredicted RBP8.91□□□□□ -0.98
MSH5-218ENST00000494646 FGF17O60258 216 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 ZNF354AO60765 605 aaPredicted RBP8.91□□□□□ -0.98
MSH5-218ENST00000494646 OR6B1O95007 311 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 ALDOAP04075 364 aaKnown RBP8.91□□□□□ -0.98
MSH5-218ENST00000494646 PRF1P14222 555 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 PTX3P26022 381 aaPredicted RBP8.91□□□□□ -0.98
MSH5-218ENST00000494646 HTR1EP28566 365 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 ARL1P40616 181 aaPredicted RBP8.91□□□□□ -0.98
MSH5-218ENST00000494646 SOX3P41225 446 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 SERPINB8P50452 374 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 RAP1GDS1P52306 607 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 HK2P52789 917 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 ALDH18A1P54886 795 aaKnown RBP8.91□□□□□ -0.98
MSH5-218ENST00000494646 RNF4P78317 190 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 ART3Q13508 389 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 SERTAD2Q14140 314 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 CDSNQ15517 529 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 TERF2Q15554 542 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.91□□□□□ -0.98
MSH5-218ENST00000494646 LIPJQ5W064 366 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 KLC3Q6P597 504 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 GOLGA7Q7Z5G4 137 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 FGD2Q7Z6J4 655 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 GPR180Q86V85 440 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 DOLPP1Q86YN1 238 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 CHERPQ8IWX8 916 aaKnown RBP8.91□□□□□ -0.98
MSH5-218ENST00000494646 SLC34A3Q8N130 599 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 ARMC10Q8N2F6 343 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 MMGT1Q8N4V1 131 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 ZNF808Q8N4W9 903 aaPredicted RBP8.91□□□□□ -0.98
MSH5-218ENST00000494646 PTGR2Q8N8N7 351 aaPredicted RBP8.91□□□□□ -0.98
MSH5-218ENST00000494646 OR52N2Q8NGI0 321 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 OR14A16Q8NHC5 309 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 SLC2A12Q8TD20 617 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 AGAP11Q8TF27 550 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 UBTD2Q8WUN7 234 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 ASB15Q8WXK1 588 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 SENP5Q96HI0 755 aaPredicted RBP8.91□□□□□ -0.98
MSH5-218ENST00000494646 SCYL1Q96KG9 808 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 RASL10BQ96S79 203 aa8.91□□□□□ -0.98
MSH5-218ENST00000494646 ACSS3Q9H6R3 686 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms