RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 CEACAM4O75871 244 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 STBD1O95210 358 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 TBX6O95947 436 aaPredicted RBP3.71□□□□□ -1.82
SMC4-224ENST00000494612 EPOP01588 193 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 GSTA2P09210 222 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 CD1DP15813 335 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 ZNF10P21506 573 aaPredicted RBP3.71□□□□□ -1.82
SMC4-224ENST00000494612 OR1D2P34982 312 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 HUNKP57058 714 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 CALCOCO2Q13137 446 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 ZNF177Q13360 481 aaPredicted RBP3.71□□□□□ -1.82
SMC4-224ENST00000494612 PDE7AQ13946 482 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 GK2Q14410 553 aaPredicted RBP3.71□□□□□ -1.82
SMC4-224ENST00000494612 KRT31Q15323 416 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 C2orf76Q3KRA6 126 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 ALKBH5Q6P6C2 394 aaKnown RBP3.71□□□□□ -1.82
SMC4-224ENST00000494612 KCNMB4Q86W47 210 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 ARL10Q8N8L6 244 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 Q8NBF4 154 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 OR5M9Q8NGP3 310 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 OR4A16Q8NH70 328 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 PSMA8Q8TAA3 256 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 CHURC1Q8WUH1 139 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 NSMCE3Q96MG7 304 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 ZNF560Q96MR9 790 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 AGAP3Q96P47 875 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 OVOL2Q9BRP0 275 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 ABCG4Q9H172 646 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 THAP9Q9H5L6 903 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 ZDHHC18Q9NUE0 388 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 FETUBQ9UGM5 382 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 WIPI2Q9Y4P8 454 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 MYH15Q9Y2K3 1946 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 KDM5CP41229 1560 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 REREQ9P2R6 1566 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 AGLP35573 1532 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 KIF14Q15058 1648 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 MYO3AQ8NEV4 1616 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 NDUFAF8A1L188 74 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 NKX6-3A6NJ46 265 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 SHISA7A6NL88 538 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 K7EQD1 137 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 CSO75390 466 aaKnown RBP3.7□□□□□ -1.82
SMC4-224ENST00000494612 ANGPTL1O95841 491 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 PNPP00491 289 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 ZNF883P0CG24 379 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 KRT3P12035 628 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 HLA-DPA1P20036 260 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 OXTRP30559 389 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 TMEM50BP56557 158 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 KCNK10P57789 538 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 YBEYP58557 167 aaPredicted RBP3.7□□□□□ -1.82
SMC4-224ENST00000494612 RBBP4Q09028 425 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 GCKRQ14397 625 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 FASTKD3Q14CZ7 662 aaKnown RBP3.7□□□□□ -1.82
SMC4-224ENST00000494612 WSCD2Q2TBF2 565 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 CAPN13Q6MZZ7 669 aaPredicted RBP3.7□□□□□ -1.82
SMC4-224ENST00000494612 DOK6Q6PKX4 331 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 GDPGP1Q6ZNW5 385 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 CACUL1Q86Y37 369 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 WDR49Q8IV35 697 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 STHQ8IWL8 128 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 ZNF444Q8N0Y2 327 aaPredicted RBP3.7□□□□□ -1.82
SMC4-224ENST00000494612 FBXW8Q8N3Y1 598 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 RELL2Q8NC24 303 aaPredicted RBP3.7□□□□□ -1.82
SMC4-224ENST00000494612 LIPHQ8WWY8 451 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 ATP6V0A1Q93050 837 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 CFAP36Q96G28 342 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 PCED1BQ96HM7 432 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 LURAP1Q96LR2 239 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 GUCD1Q96NT3 240 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 PRAM1Q96QH2 718 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 VGLL1Q99990 258 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 FNDC4Q9H6D8 234 aaPredicted RBP3.7□□□□□ -1.82
SMC4-224ENST00000494612 MAGEF1Q9HAY2 307 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 S100A14Q9HCY8 104 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 MED17Q9NVC6 651 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 THAP10Q9P2Z0 257 aaPredicted RBP3.7□□□□□ -1.82
SMC4-224ENST00000494612 MAD2L2Q9UI95 211 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 MROH2AA6NES4 1674 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 ZNF142P52746 1687 aaPredicted RBP3.7□□□□□ -1.82
SMC4-224ENST00000494612 CPS1P31327 1500 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 NPATQ14207 1427 aa3.7□□□□□ -1.82
SMC4-224ENST00000494612 CLTCQ00610 1675 aaKnown RBP3.69□□□□□ -1.82
SMC4-224ENST00000494612 CEP170BQ9Y4F5 1589 aaPredicted RBP3.69□□□□□ -1.82
SMC4-224ENST00000494612 PLA2R1Q13018 1463 aa3.69□□□□□ -1.82
SMC4-224ENST00000494612 ATP6AP2A0A1C7CYW4 349 aa3.69□□□□□ -1.82
SMC4-224ENST00000494612 SH3PXD2BA1X283 911 aa3.69□□□□□ -1.82
SMC4-224ENST00000494612 CCDC69A6NI79 296 aa3.69□□□□□ -1.82
SMC4-224ENST00000494612 KPNA7A9QM74 516 aa3.69□□□□□ -1.82
SMC4-224ENST00000494612 TFECO14948 347 aaPredicted RBP3.69□□□□□ -1.82
SMC4-224ENST00000494612 CPNE6O95741 557 aa3.69□□□□□ -1.82
SMC4-224ENST00000494612 THEGLP0DJG4 465 aa3.69□□□□□ -1.82
SMC4-224ENST00000494612 FERP16591 822 aa3.69□□□□□ -1.82
SMC4-224ENST00000494612 UGT1A4P22310 534 aa3.69□□□□□ -1.82
SMC4-224ENST00000494612 GPX3P22352 226 aa3.69□□□□□ -1.82
SMC4-224ENST00000494612 TNFSF10P50591 281 aa3.69□□□□□ -1.82
SMC4-224ENST00000494612 LUMP51884 338 aaPredicted RBP3.69□□□□□ -1.82
SMC4-224ENST00000494612 ENPP2Q13822 863 aa3.69□□□□□ -1.82
SMC4-224ENST00000494612 KIAA0141Q14154 515 aaPredicted RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms