RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 SEC14L3Q9UDX4 400 aa30.94■■■□□ 2.54
CBX4-203ENST00000494546 PLEKHB1Q9UF11 243 aaPredicted RBP30.94■■■□□ 2.54
CBX4-203ENST00000494546 C17orf105B2RV13 164 aa30.93■■■□□ 2.54
CBX4-203ENST00000494546 FOXE1O00358 373 aaPredicted RBP30.93■■■□□ 2.54
CBX4-203ENST00000494546 ZFAND5O76080 213 aa30.93■■■□□ 2.54
CBX4-203ENST00000494546 SBK3P0C264 359 aa30.93■■■□□ 2.54
CBX4-203ENST00000494546 ARFIP1P53367 373 aa30.93■■■□□ 2.54
CBX4-203ENST00000494546 HNRNPH2P55795 449 aaKnown RBP30.93■■■□□ 2.54
CBX4-203ENST00000494546 TRAF3Q13114 568 aa30.93■■■□□ 2.54
CBX4-203ENST00000494546 CUL3Q13618 768 aa30.93■■■□□ 2.54
CBX4-203ENST00000494546 C18orf63Q68DL7 685 aa30.93■■■□□ 2.54
CBX4-203ENST00000494546 TTC19Q6DKK2 380 aaPredicted RBP30.93■■■□□ 2.54
CBX4-203ENST00000494546 TMEM156Q8N614 296 aa30.93■■■□□ 2.54
CBX4-203ENST00000494546 MORN4Q8NDC4 146 aa30.93■■■□□ 2.54
CBX4-203ENST00000494546 TMEM125Q96AQ2 219 aa30.93■■■□□ 2.54
CBX4-203ENST00000494546 OR8D2Q9GZM6 311 aa30.93■■■□□ 2.54
CBX4-203ENST00000494546 RPF2Q9H7B2 306 aaKnown RBP30.93■■■□□ 2.54
CBX4-203ENST00000494546 ATG4BQ9Y4P1 393 aa30.93■■■□□ 2.54
CBX4-203ENST00000494546 USP9YO00507 2555 aaPredicted RBP30.92■■■□□ 2.54
CBX4-203ENST00000494546 IQANK1A0A1B0GTG1 560 aa30.92■■■□□ 2.54
CBX4-203ENST00000494546 WIPF3A6NGB9 483 aa30.92■■■□□ 2.54
CBX4-203ENST00000494546 A8MT66 165 aa30.92■■■□□ 2.54
CBX4-203ENST00000494546 FGF17O60258 216 aa30.92■■■□□ 2.54
CBX4-203ENST00000494546 PRKNO60260 465 aaPredicted RBP30.92■■■□□ 2.54
CBX4-203ENST00000494546 EEDO75530 441 aaKnown RBP30.92■■■□□ 2.54
CBX4-203ENST00000494546 ITGA10O75578 1167 aa30.92■■■□□ 2.54
CBX4-203ENST00000494546 RPS17P08708 135 aaKnown RBP30.92■■■□□ 2.54
CBX4-203ENST00000494546 TLX1P31314 330 aaPredicted RBP30.92■■■□□ 2.54
CBX4-203ENST00000494546 TNFRSF17Q02223 184 aa30.92■■■□□ 2.54
CBX4-203ENST00000494546 PNPLA5Q7Z6Z6 429 aaPredicted RBP30.92■■■□□ 2.54
CBX4-203ENST00000494546 ZNF227Q86WZ6 799 aa30.92■■■□□ 2.54
CBX4-203ENST00000494546 TMEM151AQ8N4L1 468 aa30.92■■■□□ 2.54
CBX4-203ENST00000494546 FAM98AQ8NCA5 519 aaKnown RBP30.92■■■□□ 2.54
CBX4-203ENST00000494546 ZNF717Q9BY31 904 aaPredicted RBP30.92■■■□□ 2.54
CBX4-203ENST00000494546 TRIM45Q9H8W5 580 aaPredicted RBP30.92■■■□□ 2.54
CBX4-203ENST00000494546 LIN28AQ9H9Z2 209 aaKnown RBP30.92■■■□□ 2.54
CBX4-203ENST00000494546 PSD3Q9NYI0 1048 aa30.92■■■□□ 2.54
CBX4-203ENST00000494546 PSMC3IPQ9P2W1 217 aaPredicted RBP30.92■■■□□ 2.54
CBX4-203ENST00000494546 POLEQ07864 2286 aa30.91■■■□□ 2.54
CBX4-203ENST00000494546 PRKRAO75569 313 aaKnown RBP30.91■■■□□ 2.54
CBX4-203ENST00000494546 BSGP35613 385 aa30.91■■■□□ 2.54
CBX4-203ENST00000494546 FRG2Q64ET8 278 aa30.91■■■□□ 2.54
CBX4-203ENST00000494546 CYP20A1Q6UW02 462 aa30.91■■■□□ 2.54
CBX4-203ENST00000494546 MILR1Q7Z6M3 343 aa30.91■■■□□ 2.54
CBX4-203ENST00000494546 FRG2BQ96QU4 278 aa30.91■■■□□ 2.54
CBX4-203ENST00000494546 SERPINI1Q99574 410 aa30.91■■■□□ 2.54
CBX4-203ENST00000494546 EPB41L4BQ9H329 900 aa30.91■■■□□ 2.54
CBX4-203ENST00000494546 TMEM216Q9P0N5 145 aa30.91■■■□□ 2.54
CBX4-203ENST00000494546 NME2P1O60361 137 aa30.9■■■□□ 2.54
CBX4-203ENST00000494546 WISP2O76076 250 aa30.9■■■□□ 2.54
CBX4-203ENST00000494546 STSP08842 583 aa30.9■■■□□ 2.54
CBX4-203ENST00000494546 TSPAN8P19075 237 aa30.9■■■□□ 2.54
CBX4-203ENST00000494546 NME2P22392 152 aa30.9■■■□□ 2.54
CBX4-203ENST00000494546 BUD31P41223 144 aaPredicted RBP30.9■■■□□ 2.54
CBX4-203ENST00000494546 CDH13P55290 713 aa30.9■■■□□ 2.54
CBX4-203ENST00000494546 ALDH6A1Q02252 535 aaKnown RBP30.9■■■□□ 2.54
CBX4-203ENST00000494546 IFT88Q13099 833 aa30.9■■■□□ 2.54
CBX4-203ENST00000494546 SGO1Q5FBB7 561 aa30.9■■■□□ 2.54
CBX4-203ENST00000494546 C1QL3Q5VWW1 255 aa30.9■■■□□ 2.54
CBX4-203ENST00000494546 HSDL2Q6YN16 418 aa30.9■■■□□ 2.54
CBX4-203ENST00000494546 C16orf47Q6ZP98 133 aaPredicted RBP30.9■■■□□ 2.54
CBX4-203ENST00000494546 ZGRF1Q86YA3 2104 aa30.9■■■□□ 2.54
CBX4-203ENST00000494546 ZNF321PQ8N8H1 164 aa30.9■■■□□ 2.54
CBX4-203ENST00000494546 OR4F6Q8NGB9 312 aa30.9■■■□□ 2.54
CBX4-203ENST00000494546 SLC2A12Q8TD20 617 aa30.9■■■□□ 2.54
CBX4-203ENST00000494546 ZNF483Q8TF39 744 aaPredicted RBP30.9■■■□□ 2.54
CBX4-203ENST00000494546 TANKQ92844 425 aa30.9■■■□□ 2.54
CBX4-203ENST00000494546 FRMD6Q96NE9 622 aa30.9■■■□□ 2.54
CBX4-203ENST00000494546 DGAT2Q96PD7 388 aa30.9■■■□□ 2.54
CBX4-203ENST00000494546 TSPAN10Q9H1Z9 355 aaPredicted RBP30.9■■■□□ 2.54
CBX4-203ENST00000494546 DDX31Q9H8H2 851 aaKnown RBP30.9■■■□□ 2.54
CBX4-203ENST00000494546 LYARQ9NX58 379 aaKnown RBP30.9■■■□□ 2.54
CBX4-203ENST00000494546 A0A0A6YYD5 115 aa30.89■■■□□ 2.54
CBX4-203ENST00000494546 ASPDHA6ND91 283 aa30.89■■■□□ 2.54
CBX4-203ENST00000494546 GOLGA8RI6L899 631 aa30.89■■■□□ 2.54
CBX4-203ENST00000494546 TMPRSS11DO60235 418 aa30.89■■■□□ 2.54
CBX4-203ENST00000494546 TAC1P20366 129 aa30.89■■■□□ 2.54
CBX4-203ENST00000494546 SSR4P51571 173 aa30.89■■■□□ 2.54
CBX4-203ENST00000494546 HIST2H2BCQ6DN03 193 aa30.89■■■□□ 2.54
CBX4-203ENST00000494546 NUDT13Q86X67 352 aa30.89■■■□□ 2.54
CBX4-203ENST00000494546 FETUBQ9UGM5 382 aa30.89■■■□□ 2.54
CBX4-203ENST00000494546 TBK1Q9UHD2 729 aa30.89■■■□□ 2.54
CBX4-203ENST00000494546 YARS2Q9Y2Z4 477 aaKnown RBP30.89■■■□□ 2.54
CBX4-203ENST00000494546 ASB4Q9Y574 426 aa30.89■■■□□ 2.54
CBX4-203ENST00000494546 PPP6CO00743 305 aa30.88■■■□□ 2.53
CBX4-203ENST00000494546 PROM1O43490 865 aa30.88■■■□□ 2.53
CBX4-203ENST00000494546 OR2J2O76002 312 aa30.88■■■□□ 2.53
CBX4-203ENST00000494546 OTCP00480 354 aa30.88■■■□□ 2.53
CBX4-203ENST00000494546 GBAP04062 536 aa30.88■■■□□ 2.53
CBX4-203ENST00000494546 FAM58BPP0C7Q3 252 aa30.88■■■□□ 2.53
CBX4-203ENST00000494546 COX7A2P14406 83 aa30.88■■■□□ 2.53
CBX4-203ENST00000494546 IGLV3-21P80748 117 aaPredicted RBP30.88■■■□□ 2.53
CBX4-203ENST00000494546 FOLH1Q04609 750 aa30.88■■■□□ 2.53
CBX4-203ENST00000494546 GGTA1PQ4G0N0 100 aa30.88■■■□□ 2.53
CBX4-203ENST00000494546 MRM1Q6IN84 353 aaKnown RBP30.88■■■□□ 2.53
CBX4-203ENST00000494546 FJX1Q86VR8 437 aa30.88■■■□□ 2.53
CBX4-203ENST00000494546 CYP4Z2PQ8N1L4 340 aa30.88■■■□□ 2.53
CBX4-203ENST00000494546 C7orf57Q8NEG2 295 aa30.88■■■□□ 2.53
CBX4-203ENST00000494546 ELOVL6Q9H5J4 265 aa30.88■■■□□ 2.53
CBX4-203ENST00000494546 PPT2Q9UMR5 302 aa30.88■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms