RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 CTNSO60931 367 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 CLEC3AO75596 197 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 PIAS1O75925 651 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 LRATO95237 230 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 BMP5P22003 454 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 CPN2P22792 545 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 GSTM2P28161 218 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 PIGAP37287 484 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 MSH2P43246 934 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 SSR2P43308 183 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 KIR2DL3P43628 341 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 KCNC1P48547 511 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 TRPC1P48995 793 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 RAP1GDS1P52306 607 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 TAS2R39P59534 338 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 MGAT5Q09328 741 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 PDIA2Q13087 525 aaKnown RBP8.91□□□□□ -0.98
UBR4-216ENST00000494503 DDX39BQ13838 428 aaKnown RBP8.91□□□□□ -0.98
UBR4-216ENST00000494503 SERTAD2Q14140 314 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 MORF4L2Q15014 288 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 TGFBIQ15582 683 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 PDK4Q16654 411 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 PAGE2BQ5JRK9 111 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 ARSKQ6UWY0 536 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 ZC3HC1Q86WB0 502 aaKnown RBP8.91□□□□□ -0.98
UBR4-216ENST00000494503 GPSM1Q86YR5 675 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 OR4N5Q8IXE1 308 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 GOLM1Q8NBJ4 401 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 ACBD4Q8NC06 268 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 FBXO36Q8NEA4 188 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 SLC22A8Q8TCC7 542 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 ACTRT1Q8TDG2 376 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 DOK4Q8TEW6 326 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 PTPMT1Q8WUK0 201 aaPredicted RBP8.91□□□□□ -0.98
UBR4-216ENST00000494503 ANKRD49Q8WVL7 239 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 KIAA1191Q96A73 305 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 RHBDF1Q96CC6 855 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 LRRC46Q96FV0 321 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 PDLIM5Q96HC4 596 aaKnown RBP8.91□□□□□ -0.98
UBR4-216ENST00000494503 SGCZQ96LD1 299 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 KCNC2Q96PR1 638 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 MAPKAP1Q9BPZ7 522 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 CAPS2Q9BXY5 557 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 ROGDIQ9GZN7 287 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 CLEC4MQ9H2X3 399 aaPredicted RBP8.91□□□□□ -0.98
UBR4-216ENST00000494503 ZDHHC11Q9H8X9 412 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 CAB39LQ9H9S4 337 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 BOKQ9UMX3 212 aaPredicted RBP8.91□□□□□ -0.98
UBR4-216ENST00000494503 PLEKHA6Q9Y2H5 1048 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 FAM215AQ9Y5M1 114 aa8.91□□□□□ -0.98
UBR4-216ENST00000494503 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.91□□□□□ -0.98
UBR4-216ENST00000494503 TMEM200CA6NKL6 621 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 FAM47E-STBD1D6RA91 191 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 CYR61O00622 381 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 AQP7O14520 342 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 PHGDHO43175 533 aaKnown RBP8.9□□□□□ -0.98
UBR4-216ENST00000494503 OR10H2O60403 315 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 WDR1O75083 606 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 STK16O75716 305 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 TRAPPC6AO75865 159 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 TGFB1P01137 390 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 KLK2P20151 261 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 DNASE1P24855 282 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 ADH7P40394 386 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 SLC6A12P48065 614 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 CDKL1Q00532 357 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 DR1Q01658 176 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 IRF8Q02556 426 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 CHIT1Q13231 466 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 DOC2AQ14183 400 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 TOMM20Q15388 145 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 AP5B1Q2VPB7 878 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 SLC25A35Q3KQZ1 300 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 ABHD17CQ6PCB6 329 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 LIX1LQ8IVB5 337 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 TCAIMQ8N3R3 496 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 SRFBP1Q8NEF9 429 aaKnown RBP8.9□□□□□ -0.98
UBR4-216ENST00000494503 PPWD1Q96BP3 646 aaKnown RBP8.9□□□□□ -0.98
UBR4-216ENST00000494503 PTCD3Q96EY7 689 aaKnown RBP8.9□□□□□ -0.98
UBR4-216ENST00000494503 RBM18Q96H35 190 aaKnown RBP8.9□□□□□ -0.98
UBR4-216ENST00000494503 QRFPRQ96P65 431 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 TMEM79Q9BSE2 394 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 EFCAB11Q9BUY7 163 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 PHACTR1Q9C0D0 580 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 SLC6A15Q9H2J7 730 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 LIME1Q9H400 295 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 SEMA4BQ9NPR2 832 aaPredicted RBP8.9□□□□□ -0.98
UBR4-216ENST00000494503 GPRC5BQ9NZH0 403 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 B4GALT7Q9UBV7 327 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 VTI1BQ9UEU0 232 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 RNF112Q9ULX5 631 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 EDARQ9UNE0 448 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 PPIEQ9UNP9 301 aaKnown RBP8.9□□□□□ -0.98
UBR4-216ENST00000494503 L3MBTL1Q9Y468 752 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 ATG4BQ9Y4P1 393 aa8.9□□□□□ -0.98
UBR4-216ENST00000494503 FLNAP21333 2647 aaKnown RBP8.89□□□□□ -0.99
UBR4-216ENST00000494503 IQANK1A0A1B0GTG1 560 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 SUPT3HB4E1H0 165 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 DVL2O14641 736 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 SUSD5O60279 629 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms