RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 ZC3H7AQ8IWR0 971 aaKnown RBP18.25■□□□□ 0.51
USP39-218ENST00000493829 TBC1D20Q96BZ9 403 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 CHST8Q9H2A9 424 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 ARL8BQ9NVJ2 186 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 UTS2RQ9UKP6 389 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 KLK13Q9UKR3 277 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 PCDHGA8Q9Y5G5 932 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 CCDC154A6NI56 674 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 CBX6O95503 412 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 KLK3P07288 261 aaPredicted RBP18.25■□□□□ 0.51
USP39-218ENST00000493829 DRD2P14416 443 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 RBMS1P29558 406 aaKnown RBP18.25■□□□□ 0.51
USP39-218ENST00000493829 SLC5A2P31639 672 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 S100A3P33764 101 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 PTGER1P34995 402 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 CPA2P48052 419 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 IRX1P78414 480 aaPredicted RBP18.25■□□□□ 0.51
USP39-218ENST00000493829 NUP210LQ5VU65 1888 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 SLC48A1Q6P1K1 146 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 BLOC1S3Q6QNY0 202 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 R3HCC1LQ7Z5L2 792 aaKnown RBP18.25■□□□□ 0.51
USP39-218ENST00000493829 ANKRD46Q86W74 232 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 TMEM151BQ8IW70 566 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 GLB1L3Q8NCI6 653 aaPredicted RBP18.25■□□□□ 0.51
USP39-218ENST00000493829 STARD8Q92502 1023 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 TESCQ96BS2 214 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 SPDL1Q96EA4 605 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 MRGBPQ9NV56 204 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 ZNF282Q9UDV7 671 aaPredicted RBP18.25■□□□□ 0.51
USP39-218ENST00000493829 ATP6V1HQ9UI12 483 aa18.25■□□□□ 0.51
USP39-218ENST00000493829 WDFY3Q8IZQ1 3526 aa18.24■□□□□ 0.51
USP39-218ENST00000493829 CCT8L1PA6NM43 557 aa18.24■□□□□ 0.51
USP39-218ENST00000493829 SLC22A2O15244 555 aa18.24■□□□□ 0.51
USP39-218ENST00000493829 FGF17O60258 216 aa18.24■□□□□ 0.51
USP39-218ENST00000493829 UBOX5O94941 541 aa18.24■□□□□ 0.51
USP39-218ENST00000493829 DLGAP3O95886 979 aa18.24■□□□□ 0.51
USP39-218ENST00000493829 SNRPB2P08579 225 aaKnown RBP18.24■□□□□ 0.51
USP39-218ENST00000493829 COX4I1P13073 169 aa18.24■□□□□ 0.51
USP39-218ENST00000493829 MAOAP21397 527 aa18.24■□□□□ 0.51
USP39-218ENST00000493829 RPL3P39023 403 aaKnown RBP18.24■□□□□ 0.51
USP39-218ENST00000493829 KIR3DL1P43629 444 aa18.24■□□□□ 0.51
USP39-218ENST00000493829 C21orf58P58505 322 aa18.24■□□□□ 0.51
USP39-218ENST00000493829 BTG2P78543 158 aa18.24■□□□□ 0.51
USP39-218ENST00000493829 SLC13A2Q13183 592 aa18.24■□□□□ 0.51
USP39-218ENST00000493829 C6orf15Q6UXA7 325 aaPredicted RBP18.24■□□□□ 0.51
USP39-218ENST00000493829 TIPARPQ7Z3E1 657 aaKnown RBP18.24■□□□□ 0.51
USP39-218ENST00000493829 ADAMTS18Q8TE60 1221 aa18.24■□□□□ 0.51
USP39-218ENST00000493829 PRPF18Q99633 342 aaKnown RBP18.24■□□□□ 0.51
USP39-218ENST00000493829 DUSP26Q9BV47 211 aa18.24■□□□□ 0.51
USP39-218ENST00000493829 SOX17Q9H6I2 414 aaPredicted RBP18.24■□□□□ 0.51
USP39-218ENST00000493829 MKKSQ9NPJ1 570 aaPredicted RBP18.24■□□□□ 0.51
USP39-218ENST00000493829 MRPS33Q9Y291 106 aaKnown RBP18.24■□□□□ 0.51
USP39-218ENST00000493829 WBP11Q9Y2W2 641 aaKnown RBP18.24■□□□□ 0.51
USP39-218ENST00000493829 SDK2Q58EX2 2172 aa18.23■□□□□ 0.51
USP39-218ENST00000493829 PGRP06401 933 aa18.23■□□□□ 0.51
USP39-218ENST00000493829 FEN1P39748 380 aaKnown RBP18.23■□□□□ 0.51
USP39-218ENST00000493829 FOLH1Q04609 750 aa18.23■□□□□ 0.51
USP39-218ENST00000493829 CYLC2Q14093 348 aaPredicted RBP18.23■□□□□ 0.51
USP39-218ENST00000493829 PUM1Q14671 1186 aaKnown RBP eCLIP18.23■□□□□ 0.51
USP39-218ENST00000493829 MPEG1Q2M385 716 aa18.23■□□□□ 0.51
USP39-218ENST00000493829 FAM69BQ5VUD6 431 aa18.23■□□□□ 0.51
USP39-218ENST00000493829 SLC2A7Q6PXP3 512 aa18.23■□□□□ 0.51
USP39-218ENST00000493829 FAM198BQ6UWH4 519 aa18.23■□□□□ 0.51
USP39-218ENST00000493829 DNAJC14Q6Y2X3 702 aaPredicted RBP18.23■□□□□ 0.51
USP39-218ENST00000493829 DNAJB14Q8TBM8 379 aa18.23■□□□□ 0.51
USP39-218ENST00000493829 SLC46A1Q96NT5 459 aa18.23■□□□□ 0.51
USP39-218ENST00000493829 OR52E6Q96RD3 313 aa18.23■□□□□ 0.51
USP39-218ENST00000493829 PRTFDC1Q9NRG1 225 aa18.23■□□□□ 0.51
USP39-218ENST00000493829 GPN3Q9UHW5 284 aaPredicted RBP18.23■□□□□ 0.51
USP39-218ENST00000493829 ENTPD4Q9Y227 616 aa18.23■□□□□ 0.51
USP39-218ENST00000493829 DCHS1Q96JQ0 3298 aa18.23■□□□□ 0.51
USP39-218ENST00000493829 ASPDHA6ND91 283 aa18.22■□□□□ 0.51
USP39-218ENST00000493829 ANGPT2O15123 496 aa18.22■□□□□ 0.51
USP39-218ENST00000493829 PDPK1O15530 556 aa18.22■□□□□ 0.51
USP39-218ENST00000493829 CNOT3O75175 753 aaKnown RBP18.22■□□□□ 0.51
USP39-218ENST00000493829 BMP10O95393 424 aa18.22■□□□□ 0.51
USP39-218ENST00000493829 ADSLP30566 484 aaPredicted RBP18.22■□□□□ 0.51
USP39-218ENST00000493829 PHC1P78364 1004 aa18.22■□□□□ 0.51
USP39-218ENST00000493829 OCA2Q04671 838 aa18.22■□□□□ 0.51
USP39-218ENST00000493829 MAPRE2Q15555 327 aa18.22■□□□□ 0.51
USP39-218ENST00000493829 CLECL1Q8IZS7 167 aa18.22■□□□□ 0.51
USP39-218ENST00000493829 STT3BQ8TCJ2 826 aa18.22■□□□□ 0.51
USP39-218ENST00000493829 RCN3Q96D15 328 aa18.22■□□□□ 0.51
USP39-218ENST00000493829 MTERF3Q96E29 417 aa18.22■□□□□ 0.51
USP39-218ENST00000493829 LRFN5Q96NI6 719 aa18.22■□□□□ 0.51
USP39-218ENST00000493829 NPAS2Q99743 824 aa18.22■□□□□ 0.51
USP39-218ENST00000493829 CLK4Q9HAZ1 481 aaKnown RBP18.22■□□□□ 0.51
USP39-218ENST00000493829 LANCL2Q9NS86 450 aa18.22■□□□□ 0.51
USP39-218ENST00000493829 ATAD3AQ9NVI7 634 aa18.22■□□□□ 0.51
USP39-218ENST00000493829 WDR70Q9NW82 654 aa18.22■□□□□ 0.51
USP39-218ENST00000493829 CES1P1Q9UKY3 287 aa18.22■□□□□ 0.51
USP39-218ENST00000493829 MAPRE3Q9UPY8 281 aa18.22■□□□□ 0.51
USP39-218ENST00000493829 AK5Q9Y6K8 562 aa18.22■□□□□ 0.51
USP39-218ENST00000493829 C9J4A7 227 aa18.22■□□□□ 0.51
USP39-218ENST00000493829 TGFBR3LH3BV60 316 aa18.22■□□□□ 0.51
USP39-218ENST00000493829 IL6P05231 212 aa18.22■□□□□ 0.51
USP39-218ENST00000493829 SRSF11Q05519 484 aaKnown RBP18.22■□□□□ 0.51
USP39-218ENST00000493829 DUSP2Q05923 314 aa18.22■□□□□ 0.51
USP39-218ENST00000493829 DPY19L1Q2PZI1 675 aa18.22■□□□□ 0.51
USP39-218ENST00000493829 FAM91A1Q658Y4 838 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms