RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 C10orf82Q8WW14 230 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 DCUN1D4Q92564 292 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 CNOT9Q92600 299 aaKnown RBP7.57□□□□□ -1.2
BRCA1-221ENST00000493795 HNRNPABQ99729 332 aaKnown RBP7.57□□□□□ -1.2
BRCA1-221ENST00000493795 HIPK2Q9H2X6 1198 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 KCNJ16Q9NPI9 418 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 POLE4Q9NR33 117 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 RXFP3Q9NSD7 469 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 C14orf119Q9NWQ9 140 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 CNOT11Q9UKZ1 510 aaKnown RBP7.57□□□□□ -1.2
BRCA1-221ENST00000493795 FAAHO00519 579 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 DFNA5O60443 496 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 PAHP00439 452 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 CDK1P06493 297 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 NDUFV2P19404 249 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 BDKRB1P46663 353 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 GSK3BP49841 420 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 CAV2P51636 162 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 GHRHRQ02643 423 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 GINS1Q14691 196 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 ARL6IP1Q15041 203 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 GPR142Q7Z601 462 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 TMEM126BQ8IUX1 230 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 CMTM1Q8IZ96 169 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 MYLIPQ8WY64 445 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 TRIB2Q92519 343 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 NDRG1Q92597 394 aaKnown RBP7.57□□□□□ -1.2
BRCA1-221ENST00000493795 NTAN1Q96AB6 310 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 PGAP3Q96FM1 320 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-221ENST00000493795 IL25Q9H293 177 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 PPA2Q9H2U2 334 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 ABCB8Q9NUT2 735 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 GPATCH2Q9NW75 528 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 B3GNT2Q9NY97 397 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 PCDHB3Q9Y5E6 796 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 SHROOM2Q13796 1616 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 LRRC7Q96NW7 1537 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 A6NHS1 94 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 SLC38A8A6NNN8 435 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 DNAJB5O75953 348 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 ADAP00813 363 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 OAS1P00973 400 aaKnown RBP7.57□□□□□ -1.2
BRCA1-221ENST00000493795 CHRNA4P43681 627 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 TSFMP43897 325 aaKnown RBP7.57□□□□□ -1.2
BRCA1-221ENST00000493795 PITPNBP48739 271 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 HK3P52790 923 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 TAS2R31P59538 309 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 PTCHD3Q3KNS1 767 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 FLYWCH1Q4VC44 716 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 BCL2L15Q5TBC7 163 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 LIPKQ5VXJ0 399 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 EEF1DP3Q658K8 133 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 REEP3Q6NUK4 255 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 TMEM53Q6P2H8 277 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 MAPK15Q8TD08 544 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 ISOC1Q96CN7 298 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 RDH12Q96NR8 316 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 PKP2Q99959 881 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 ACBD6Q9BR61 282 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-221ENST00000493795 SLC6A16Q9GZN6 736 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 XPNPEP1Q9NQW7 623 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 SDHAF2Q9NX18 166 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 GMEB2Q9UKD1 530 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 A8MU76 341 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 SPATA31C2B4DYI2 1134 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 FMO6PO60774 539 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 LRCH4O75427 683 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 C6orf47O95873 294 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 AMY2AP04746 511 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 BPIP17213 487 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 CELP19835 753 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 UQCRC2P22695 453 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 HNRNPH3P31942 346 aaKnown RBP7.57□□□□□ -1.2
BRCA1-221ENST00000493795 AFF3P51826 1226 aaKnown RBP7.57□□□□□ -1.2
BRCA1-221ENST00000493795 ARHGAP11AQ6P4F7 1023 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 GDPD4Q6W3E5 623 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 FAM43BQ6ZT52 329 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-221ENST00000493795 USP50Q70EL3 339 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-221ENST00000493795 SLC24A5Q71RS6 500 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 RNF130Q86XS8 419 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 ARL14EPQ8N8R7 260 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-221ENST00000493795 GLIS3Q8NEA6 775 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 SLC35F5Q8WV83 523 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 FBXL20Q96IG2 436 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 FAM84AQ96KN4 292 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 EBF4Q9BQW3 602 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 GLIS2Q9BZE0 524 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-221ENST00000493795 SLA2Q9H6Q3 261 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 APMAPQ9HDC9 416 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 PPM1HQ9ULR3 514 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 JCADQ9P266 1359 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 SMIM28A0A1B0GU29 152 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 ETFAP13804 333 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 ATP1B2P14415 290 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-221ENST00000493795 PRKCAP17252 672 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 PRPH2P23942 346 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 AQP2P41181 271 aa7.57□□□□□ -1.2
BRCA1-221ENST00000493795 HABP2Q14520 560 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-221ENST00000493795 MELKQ14680 651 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms