RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 MAGED4Q96JG8 741 aa10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 BARD1Q99728 777 aaKnown RBP10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 GABARAPL3Q9BY60 117 aa10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 ROGDIQ9GZN7 287 aa10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 ABCG4Q9H172 646 aa10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 SRMSQ9H3Y6 488 aa10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 ZNF624Q9P2J8 865 aaPredicted RBP10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 ASB4Q9Y574 426 aa10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 LYVE1Q9Y5Y7 322 aa10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 TMEM247A6NEH6 219 aa10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 E9PQ18 207 aa10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 TNFRSF11BO00300 401 aa10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 ANXA8P13928 327 aa10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 AK4P27144 223 aaPredicted RBP10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 PXNP49023 591 aaPredicted RBP10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 CCT3P49368 545 aaKnown RBP10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 HSPB3Q12988 150 aa10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 TUBA3CQ13748 450 aa10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 TPRG1LQ5T0D9 272 aa10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 KIAA1614Q5VZ46 1190 aa10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 TSEN54Q7Z6J9 526 aaKnown RBP10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 ABI3BPQ7Z7G0 1075 aa10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 HORMAD2Q8N7B1 307 aa10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 ACOT4Q8N9L9 421 aa10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 TTC29Q8NA56 475 aaPredicted RBP10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 GIPC3Q8TF64 312 aa10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 GAL3ST3Q96A11 431 aa10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 THAP11Q96EK4 314 aa10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 AMDHD1Q96NU7 426 aa10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 ADNPQ9H2P0 1102 aa10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 RIBC2Q9H4K1 309 aa10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 POLR1BQ9H9Y6 1135 aa10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 POLMQ9NP87 494 aaPredicted RBP10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 SEMA3GQ9NS98 782 aa10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 NDRG4Q9ULP0 352 aaKnown RBP10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 LAMA3Q16787 3333 aa10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 PLXND1Q9Y4D7 1925 aa10.24□□□□□ -0.77
PHACTR4-204ENST00000493669 FAM221BA6H8Z2 402 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 PRAMEF26H0Y7S4 382 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 H0Y8X5 98 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 ZW10O43264 779 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 TNFSF14O43557 240 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 MRPS14O60783 128 aaKnown RBP10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 MITFO75030 526 aaPredicted RBP10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 OPN1SWP03999 348 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 TFPTP0C1Z6 253 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 EEF1B2P24534 225 aaKnown RBP10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 NUP107P57740 925 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 RELAQ04206 551 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 ILF3Q12906 894 aaKnown RBP eCLIP10.23□□□□□ -0.777e-7■■■■□ 19.4
PHACTR4-204ENST00000493669 SLAMF1Q13291 335 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 ALG11Q2TAA5 492 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 CTU2Q2VPK5 515 aaKnown RBP10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 TSPYL5Q86VY4 417 aaPredicted RBP10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 OR4E2Q8NGC2 313 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 OR4C15Q8NGM1 316 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 TSACCQ96A04 125 aaPredicted RBP10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 KLHL31Q9H511 634 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 EXD2Q9NVH0 621 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 TMEM9Q9P0T7 183 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 NAALAD2Q9Y3Q0 740 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 ENPP4Q9Y6X5 453 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 PRAMEF33A0A0G2JMD5 474 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 ARRDC5A6NEK1 342 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 SLC1A7O00341 560 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 RASGRP1O95267 797 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 EML2O95834 649 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 SLC19A1P41440 591 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 XCR1P46094 333 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 HMGA2P52926 109 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 CASP9P55211 416 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 RGS1Q08116 209 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 MEP1AQ16819 746 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 TJAP1Q5JTD0 557 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 CWF19L1Q69YN2 538 aaKnown RBP10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 ERI1Q8IV48 349 aaKnown RBP10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 AMER3Q8N944 861 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 SLC38A5Q8WUX1 472 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 SLC35G5Q96KT7 338 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 PIP5K1AQ99755 562 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 TMEM168Q9H0V1 697 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 GLIPR2Q9H4G4 154 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 CXorf21Q9HAI6 301 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 CD93Q9NPY3 652 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 PRDM9Q9NQV7 894 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 ENOPH1Q9UHY7 261 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 CA5BQ9Y2D0 317 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 FAM32AQ9Y421 112 aaKnown RBP10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 KLK4Q9Y5K2 254 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 GMPPBQ9Y5P6 360 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 CDH23Q9H251 3354 aa10.23□□□□□ -0.77
PHACTR4-204ENST00000493669 OR2A25A4D2G3 310 aa10.22□□□□□ -0.77
PHACTR4-204ENST00000493669 TNFP01375 233 aa10.22□□□□□ -0.77
PHACTR4-204ENST00000493669 IFNW1P05000 195 aa10.22□□□□□ -0.77
PHACTR4-204ENST00000493669 IL7RP16871 459 aa10.22□□□□□ -0.77
PHACTR4-204ENST00000493669 RHCEP18577 417 aa10.22□□□□□ -0.77
PHACTR4-204ENST00000493669 DCKP27707 260 aa10.22□□□□□ -0.77
PHACTR4-204ENST00000493669 SLC5A2P31639 672 aa10.22□□□□□ -0.77
PHACTR4-204ENST00000493669 YAP1P46937 504 aaKnown RBP10.22□□□□□ -0.77
PHACTR4-204ENST00000493669 CLK3P49761 638 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms