RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, human

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG7-208	ENST00000493609	NLGN3	Q9NZ94	848 aa		4.88	□□□□□ -1.63
SMG7-208	ENST00000493609	ITM2B	Q9Y287	266 aa		4.88	□□□□□ -1.63
SMG7-208	ENST00000493609	RNF215	Q9Y6U7	377 aa		4.88	□□□□□ -1.63
SMG7-208	ENST00000493609	RNF123	Q5XPI4	1314 aa		4.88	□□□□□ -1.63
SMG7-208	ENST00000493609	TRPM3	Q9HCF6	1732 aa	Predicted RBP	4.88	□□□□□ -1.63
SMG7-208	ENST00000493609	MARF1	Q9Y4F3	1742 aa	Known RBP	4.88	□□□□□ -1.63
SMG7-208	ENST00000493609	POLR3A	O14802	1390 aa	Predicted RBP	4.88	□□□□□ -1.63
SMG7-208	ENST00000493609	EDC4	Q6P2E9	1401 aa	Known RBP	4.88	□□□□□ -1.63
SMG7-208	ENST00000493609	SNED1	Q8TER0	1413 aa		4.88	□□□□□ -1.63
SMG7-208	ENST00000493609	CRYBG1	Q9Y4K1	1723 aa		4.87	□□□□□ -1.63
SMG7-208	ENST00000493609	LOC105371242	A0A075B767	164 aa		4.87	□□□□□ -1.63
SMG7-208	ENST00000493609	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	4.87	□□□□□ -1.63
SMG7-208	ENST00000493609	C2orf92	A0A1B0GVN3	265 aa		4.87	□□□□□ -1.63
SMG7-208	ENST00000493609	LMO7DN	F2Z398	122 aa		4.87	□□□□□ -1.63
SMG7-208	ENST00000493609		K7EQD1	137 aa		4.87	□□□□□ -1.63
SMG7-208	ENST00000493609		M0R296	226 aa		4.87	□□□□□ -1.63
SMG7-208	ENST00000493609	SOCS3	O14543	225 aa		4.87	□□□□□ -1.63
SMG7-208	ENST00000493609	UROS	P10746	265 aa		4.87	□□□□□ -1.63
SMG7-208	ENST00000493609	EDNRA	P25101	427 aa		4.87	□□□□□ -1.63
SMG7-208	ENST00000493609	GJB2	P29033	226 aa		4.87	□□□□□ -1.63
SMG7-208	ENST00000493609	GPR183	P32249	361 aa		4.87	□□□□□ -1.63
SMG7-208	ENST00000493609	ADAR	P55265	1226 aa	Known RBP	4.87	□□□□□ -1.63
SMG7-208	ENST00000493609	STX1B	P61266	288 aa		4.87	□□□□□ -1.63
SMG7-208	ENST00000493609	ZNF177	Q13360	481 aa	Predicted RBP	4.87	□□□□□ -1.63
SMG7-208	ENST00000493609	CEACAM7	Q14002	265 aa		4.87	□□□□□ -1.63
SMG7-208	ENST00000493609	SMU1	Q2TAY7	513 aa		4.87	□□□□□ -1.63
SMG7-208	ENST00000493609	C2CD6	Q53TS8	623 aa		4.87	□□□□□ -1.63
SMG7-208	ENST00000493609	ZNF789	Q5FWF6	425 aa		4.87	□□□□□ -1.63
SMG7-208	ENST00000493609	DOK6	Q6PKX4	331 aa		4.87	□□□□□ -1.63
SMG7-208	ENST00000493609	TMEM270	Q6UE05	265 aa		4.87	□□□□□ -1.63
SMG7-208	ENST00000493609		Q6ZVQ6	151 aa		4.87	□□□□□ -1.63
SMG7-208	ENST00000493609		Q71RC1	249 aa	Predicted RBP	4.87	□□□□□ -1.63
SMG7-208	ENST00000493609	ASPG	Q86U10	573 aa		4.87	□□□□□ -1.63
SMG7-208	ENST00000493609	FAM9B	Q8IZU0	186 aa		4.87	□□□□□ -1.63
SMG7-208	ENST00000493609	METTL4	Q8N3J2	472 aa		4.87	□□□□□ -1.63
SMG7-208	ENST00000493609		Q8NBF4	154 aa		4.87	□□□□□ -1.63
SMG7-208	ENST00000493609	OR9Q2	Q8NGE9	314 aa		4.87	□□□□□ -1.63
SMG7-208	ENST00000493609	ZNF689	Q96CS4	500 aa	Predicted RBP	4.87	□□□□□ -1.63
SMG7-208	ENST00000493609	PKP2	Q99959	881 aa		4.87	□□□□□ -1.63
SMG7-208	ENST00000493609	CABLES2	Q9BTV7	478 aa		4.87	□□□□□ -1.63
SMG7-208	ENST00000493609	FNDC4	Q9H6D8	234 aa	Predicted RBP	4.87	□□□□□ -1.63
SMG7-208	ENST00000493609	NDE1	Q9NXR1	346 aa		4.87	□□□□□ -1.63
SMG7-208	ENST00000493609	SSH2	Q76I76	1423 aa		4.87	□□□□□ -1.63
SMG7-208	ENST00000493609	NHSL1	Q5SYE7	1610 aa		4.86	□□□□□ -1.63
SMG7-208	ENST00000493609	ALS2	Q96Q42	1657 aa		4.86	□□□□□ -1.63
SMG7-208	ENST00000493609		A0A0J9YWU9	116 aa		4.86	□□□□□ -1.63
SMG7-208	ENST00000493609	C13orf42	A0A1B0GVH6	325 aa		4.86	□□□□□ -1.63
SMG7-208	ENST00000493609	LRRD1	A4D1F6	860 aa		4.86	□□□□□ -1.63
SMG7-208	ENST00000493609	KRTAP16-1	A8MUX0	517 aa		4.86	□□□□□ -1.63
SMG7-208	ENST00000493609	NTN3	O00634	580 aa	Predicted RBP	4.86	□□□□□ -1.63
SMG7-208	ENST00000493609	NXPH4	O95158	308 aa		4.86	□□□□□ -1.63
SMG7-208	ENST00000493609	TRIM49	P0CI25	452 aa		4.86	□□□□□ -1.63
SMG7-208	ENST00000493609	TRIM49C	P0CI26	452 aa		4.86	□□□□□ -1.63
SMG7-208	ENST00000493609	VEGFC	P49767	419 aa		4.86	□□□□□ -1.63
SMG7-208	ENST00000493609	CLCN4	P51793	760 aa		4.86	□□□□□ -1.63
SMG7-208	ENST00000493609	NME5	P56597	212 aa		4.86	□□□□□ -1.63
SMG7-208	ENST00000493609	SLC34A1	Q06495	639 aa		4.86	□□□□□ -1.63
SMG7-208	ENST00000493609	ACKR1	Q16570	336 aa		4.86	□□□□□ -1.63
SMG7-208	ENST00000493609	TAF1B	Q53T94	588 aa	Predicted RBP	4.86	□□□□□ -1.63
SMG7-208	ENST00000493609	GDPGP1	Q6ZNW5	385 aa		4.86	□□□□□ -1.63
SMG7-208	ENST00000493609	RFPL4B	Q6ZWI9	263 aa		4.86	□□□□□ -1.63
SMG7-208	ENST00000493609	SLC43A2	Q8N370	569 aa		4.86	□□□□□ -1.63
SMG7-208	ENST00000493609	PRSS33	Q8NF86	280 aa		4.86	□□□□□ -1.63
SMG7-208	ENST00000493609	OR5M9	Q8NGP3	310 aa		4.86	□□□□□ -1.63
SMG7-208	ENST00000493609	OR13C5	Q8NGS8	318 aa		4.86	□□□□□ -1.63
SMG7-208	ENST00000493609	TRIM51	Q9BSJ1	452 aa		4.86	□□□□□ -1.63
SMG7-208	ENST00000493609	IL1RAPL2	Q9NP60	686 aa		4.86	□□□□□ -1.63
SMG7-208	ENST00000493609	THAP10	Q9P2Z0	257 aa	Predicted RBP	4.86	□□□□□ -1.63
SMG7-208	ENST00000493609	KLK11	Q9UBX7	282 aa		4.86	□□□□□ -1.63
SMG7-208	ENST00000493609	PIK3C2A	O00443	1686 aa		4.86	□□□□□ -1.63
SMG7-208	ENST00000493609	SHPRH	Q149N8	1683 aa		4.86	□□□□□ -1.63
SMG7-208	ENST00000493609		A0A1B0GU03	582 aa		4.85	□□□□□ -1.63
SMG7-208	ENST00000493609	ANHX	E9PGG2	379 aa		4.85	□□□□□ -1.63
SMG7-208	ENST00000493609		E9PQ18	207 aa		4.85	□□□□□ -1.63
SMG7-208	ENST00000493609	TFEC	O14948	347 aa	Predicted RBP	4.85	□□□□□ -1.63
SMG7-208	ENST00000493609	CLN5	O75503	358 aa		4.85	□□□□□ -1.63
SMG7-208	ENST00000493609	EVC	P57679	992 aa		4.85	□□□□□ -1.63
SMG7-208	ENST00000493609	SLC3A1	Q07837	685 aa		4.85	□□□□□ -1.63
SMG7-208	ENST00000493609	GPR50	Q13585	617 aa		4.85	□□□□□ -1.63
SMG7-208	ENST00000493609	SLC39A12	Q504Y0	691 aa		4.85	□□□□□ -1.63
SMG7-208	ENST00000493609	FAAP20	Q6NZ36	180 aa		4.85	□□□□□ -1.63
SMG7-208	ENST00000493609	C3P1	Q6ZMU1	363 aa		4.85	□□□□□ -1.63
SMG7-208	ENST00000493609	RNF149	Q8NC42	400 aa		4.85	□□□□□ -1.63
SMG7-208	ENST00000493609	OR52B6	Q8NGF0	335 aa		4.85	□□□□□ -1.63
SMG7-208	ENST00000493609	OR10G7	Q8NGN6	311 aa		4.85	□□□□□ -1.63
SMG7-208	ENST00000493609	FAM46B	Q96A09	425 aa		4.85	□□□□□ -1.63
SMG7-208	ENST00000493609	TRIM15	Q9C019	465 aa		4.85	□□□□□ -1.63
SMG7-208	ENST00000493609	RNPEPL1	Q9HAU8	725 aa		4.85	□□□□□ -1.63
SMG7-208	ENST00000493609	MRPS18C	Q9Y3D5	142 aa	Known RBP	4.85	□□□□□ -1.63
SMG7-208	ENST00000493609	ETV7	Q9Y603	341 aa		4.85	□□□□□ -1.63
SMG7-208	ENST00000493609	PRSS21	Q9Y6M0	314 aa		4.85	□□□□□ -1.63
SMG7-208	ENST00000493609		A0A1W2PP64	1363 aa		4.85	□□□□□ -1.63
SMG7-208	ENST00000493609	PLEKHG2	Q9H7P9	1386 aa		4.85	□□□□□ -1.63
SMG7-208	ENST00000493609	OVOS2	A0A0J9YW53	1432 aa		4.85	□□□□□ -1.63
SMG7-208	ENST00000493609	OVOS2	Q6IE36	1432 aa		4.85	□□□□□ -1.63
SMG7-208	ENST00000493609	LTBP4	Q8N2S1	1624 aa		4.85	□□□□□ -1.63
SMG7-208	ENST00000493609	CAMTA1	Q9Y6Y1	1673 aa		4.85	□□□□□ -1.63
SMG7-208	ENST00000493609	RGPD8	O14715	1765 aa	Predicted RBP	4.85	□□□□□ -1.63
SMG7-208	ENST00000493609	FAM208A	Q9UK61	1670 aa	Known RBP	4.84	□□□□□ -1.63
SMG7-208	ENST00000493609	SLIT3	O75094	1523 aa		4.84	□□□□□ -1.63

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