RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 UTP23Q9BRU9 249 aaKnown RBP4.01□□□□□ -1.77
BRCA1-220ENST00000492859 TIPINQ9BVW5 301 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 NMNAT2Q9BZQ4 307 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 SRRQ9GZT4 340 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 WNT10AQ9GZT5 417 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 RNF41Q9H4P4 317 aaPredicted RBP4.01□□□□□ -1.77
BRCA1-220ENST00000492859 EBF3Q9H4W6 596 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 WDR54Q9H977 334 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 PIDD1Q9HB75 910 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 BARX1Q9HBU1 254 aaPredicted RBP4.01□□□□□ -1.77
BRCA1-220ENST00000492859 MCCC2Q9HCC0 563 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 ZBTB26Q9HCK0 441 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 CD209Q9NNX6 404 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 PXMP2Q9NR77 195 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 LIN7CQ9NUP9 197 aaKnown RBP4.01□□□□□ -1.77
BRCA1-220ENST00000492859 TEX10Q9NXF1 929 aaPredicted RBP4.01□□□□□ -1.77
BRCA1-220ENST00000492859 CRIM1Q9NZV1 1036 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 RHCGQ9UBD6 479 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 CD207Q9UJ71 328 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 ACSL5Q9ULC5 683 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 CLEC4EQ9ULY5 219 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 DRG1Q9Y295 367 aaKnown RBP4.01□□□□□ -1.77
BRCA1-220ENST00000492859 CA5BQ9Y2D0 317 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 ERCC6Q03468 1493 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 NID2Q14112 1375 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4□□□□□ -1.77
BRCA1-220ENST00000492859 A0A1W2PQ27 194 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 A0A1W2PQ64 194 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 A0A1W2PQC6 194 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 UBA6A0AVT1 1052 aaPredicted RBP4□□□□□ -1.77
BRCA1-220ENST00000492859 NPEPPSL1A6NEC2 478 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 C9orf172C9J069 976 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 C9JVG2 144 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 POC1B-GALNT4F8VUJ3 575 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 H0Y8X5 98 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 TMEM189-UBE2V1I3L0A0 370 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 SGK494L7N484 410 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 M0R296 226 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 P2RY10O00398 339 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 PPP6CO00743 305 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 TXNDC9O14530 226 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 SLC22A1O15245 554 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 NDUFS4O43181 175 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 EMC8O43402 210 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 OIP5O43482 229 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 LCMT2O60294 686 aaKnown RBP4□□□□□ -1.77
BRCA1-220ENST00000492859 VNN1O95497 513 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 C4BPAP04003 597 aaKnown RBP4□□□□□ -1.77
BRCA1-220ENST00000492859 HCKP08631 526 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 FTH1P19P0C7X4 201 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 SMIM10L1P0DMW3 83 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 MAPTP10636 758 aaKnown RBP4□□□□□ -1.77
BRCA1-220ENST00000492859 PIM1P11309 404 aaPredicted RBP4□□□□□ -1.77
BRCA1-220ENST00000492859 PRF1P14222 555 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 CD36P16671 472 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 CD22P20273 847 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 S1PR1P21453 382 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 FPR1P21462 350 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 UQCRC2P22695 453 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 PSMB4P28070 264 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 HNRNPH3P31942 346 aaKnown RBP4□□□□□ -1.77
BRCA1-220ENST00000492859 PHBP35232 272 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 GPX4P36969 197 aaPredicted RBP4□□□□□ -1.77
BRCA1-220ENST00000492859 MAP3K8P41279 467 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 MAGEA6P43360 314 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 KIR2DL1P43626 348 aaPredicted RBP4□□□□□ -1.77
BRCA1-220ENST00000492859 RFX5P48382 616 aaPredicted RBP4□□□□□ -1.77
BRCA1-220ENST00000492859 NDST1P52848 882 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 TMEM33P57088 247 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 ADARB1P78563 741 aaKnown RBP4□□□□□ -1.77
BRCA1-220ENST00000492859 PITPNAQ00169 270 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 PLAURQ03405 335 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 TNFRSF9Q07011 255 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 CXCL9Q07325 125 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 FGL1Q08830 312 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 EIF4EBP2Q13542 120 aaPredicted RBP4□□□□□ -1.77
BRCA1-220ENST00000492859 SNW1Q13573 536 aaKnown RBP4□□□□□ -1.77
BRCA1-220ENST00000492859 KEAP1Q14145 624 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 RAB39AQ14964 217 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 ARL6IP1Q15041 203 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 DLG2Q15700 870 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 NAB2Q15742 525 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 NPY5RQ15761 445 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 VWC2Q2TAL6 325 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 TMEM249Q2WGJ8 235 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 EDRF1Q3B7T1 1238 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 EARS2Q5JPH6 523 aaKnown RBP4□□□□□ -1.77
BRCA1-220ENST00000492859 CTSL3PQ5NE16 218 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 SPOUT1Q5T280 376 aaKnown RBP4□□□□□ -1.77
BRCA1-220ENST00000492859 LGSNQ5TDP6 509 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 MARC1Q5VT66 337 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 ASPHD2Q6ICH7 369 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 TMEM211Q6ICI0 200 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 FRMPD2BQ6IN97 320 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 REEP3Q6NUK4 255 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 LRRC8BQ6P9F7 803 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 SPESP1Q6UW49 350 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 Q6ZNX1 250 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 GADL1Q6ZQY3 521 aa4□□□□□ -1.77
BRCA1-220ENST00000492859 RRM2BQ7LG56 351 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms