RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 RCN2Q14257 317 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 RBBP5Q15291 538 aaKnown RBP7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 OR4D1Q15615 310 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 MPEG1Q2M385 716 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 CDKL4Q5MAI5 379 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 RIPPLY2Q5TAB7 128 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 ABHD17CQ6PCB6 329 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 OPN5Q6U736 354 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 IL20RBQ6UXL0 311 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 TMIGD1Q6UXZ0 262 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 CMC1Q7Z7K0 106 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 TMEM200AQ86VY9 491 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 RNF175Q8N4F7 328 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 NKAPQ8N5F7 415 aaKnown RBP7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 TMEM251Q8N6I4 163 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 TMEM52Q8NDY8 209 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 SPATA4Q8NEY3 305 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 OR2L5Q8NG80 312 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 OR5L2Q8NGL0 311 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 OR14A16Q8NHC5 309 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 EXT2Q93063 718 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 KIAA1191Q96A73 305 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 RHBDF1Q96CC6 855 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 MBD6Q96DN6 1003 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 WDR34Q96EX3 536 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 VPS39Q96JC1 886 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 SCYL1Q96KG9 808 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 SERINC2Q96SA4 455 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 CAPS2Q9BXY5 557 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 RHBGQ9H310 441 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 SH2D2AQ9NP31 389 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 DLL4Q9NR61 685 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 ZNF358Q9NW07 568 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 GPRC5BQ9NZH0 403 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 Q9UFV3 132 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 DAPP1Q9UN19 280 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 OARD1Q9Y530 152 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 CLCA3PQ9Y6N3 262 aa7.82□□□□□ -1.16
APOBEC3F-204ENST00000491387 MYOCOSA0A1B0GUC4 107 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 TCRBV9S1A1TA0A576 114 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 FAM166BA8MTA8 275 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 CCDC188H7C350 402 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 WWP2O00308 870 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 ZNF354AO60765 605 aaPredicted RBP7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 H2AFYO75367 372 aaKnown RBP7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 SCELO95171 688 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 GABRA1P14867 456 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 ADH7P40394 386 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 KCNC1P48547 511 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 MTTPP55157 894 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 LIM2P55344 173 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 RNF4P78317 190 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 IGLV3-21P80748 117 aaPredicted RBP7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 IRF9Q00978 393 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 PLGLB1Q02325 96 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 TBL3Q12788 808 aaKnown RBP7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 ILF2Q12905 390 aaKnown RBP7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 SLC13A2Q13183 592 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 CBLBQ13191 982 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 MYBPHQ13203 477 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 SERTAD2Q14140 314 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 SLC10A1Q14973 349 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 FBXL19-AS1Q494R0 122 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 PIGGQ5H8A4 983 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 ARSKQ6UWY0 536 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 C16orf47Q6ZP98 133 aaPredicted RBP7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 SYDE1Q6ZW31 735 aaPredicted RBP7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 VN1R5Q7Z5H4 357 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 ADAMTSL2Q86TH1 951 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 CCDC25Q86WR0 208 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 LIX1LQ8IVB5 337 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 KRT78Q8N1N4 520 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 NUBPLQ8TB37 319 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 FBXO25Q8TCJ0 367 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 SARAFQ96BY9 339 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 LRRC39Q96DD0 335 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 ALPK1Q96QP1 1244 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 ERP44Q9BS26 406 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 ALOXE3Q9BYJ1 711 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 ROGDIQ9GZN7 287 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 REXO4Q9GZR2 422 aaKnown RBP7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 POPDC3Q9HBV1 291 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 LYRM4Q9HD34 91 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 ACKR4Q9NPB9 350 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 PRDM7Q9NQW5 492 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 RASSF1Q9NS23 344 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 SACM1LQ9NTJ5 587 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 QPCTLQ9NXS2 382 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 DNAJB12Q9NXW2 375 aaKnown RBP7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 B4GALT7Q9UBV7 327 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 ST6GALNAC2Q9UJ37 374 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 EDARQ9UNE0 448 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 ATG4BQ9Y4P1 393 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 LIPGQ9Y5X9 500 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 JMJD1CQ15652 2540 aa7.81□□□□□ -1.16
APOBEC3F-204ENST00000491387 LRRC14BA6NHZ5 514 aa7.8□□□□□ -1.16
APOBEC3F-204ENST00000491387 FAM159BA6NKW6 160 aa7.8□□□□□ -1.16
APOBEC3F-204ENST00000491387 SH3BGRLO75368 114 aa7.8□□□□□ -1.16
APOBEC3F-204ENST00000491387 WDR47O94967 919 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms