RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 C17orf105B2RV13 164 aa16.72■□□□□ 0.27
HMGN1-219ENST00000491183 PEX1O43933 1283 aa16.72■□□□□ 0.27
HMGN1-219ENST00000491183 FGF17O60258 216 aa16.72■□□□□ 0.27
HMGN1-219ENST00000491183 UGDHO60701 494 aa16.72■□□□□ 0.27
HMGN1-219ENST00000491183 ETHE1O95571 254 aa16.72■□□□□ 0.27
HMGN1-219ENST00000491183 INHBAP08476 426 aa16.72■□□□□ 0.27
HMGN1-219ENST00000491183 ZNF24P17028 368 aa16.72■□□□□ 0.27
HMGN1-219ENST00000491183 RFC3P40938 356 aa16.72■□□□□ 0.27
HMGN1-219ENST00000491183 SSR4P51571 173 aa16.72■□□□□ 0.27
HMGN1-219ENST00000491183 IGLV3-21P80748 117 aaPredicted RBP16.72■□□□□ 0.27
HMGN1-219ENST00000491183 ADORA2A-AS1P86434 159 aa16.72■□□□□ 0.27
HMGN1-219ENST00000491183 CPSF6Q16630 551 aaKnown RBP eCLIP16.72■□□□□ 0.27
HMGN1-219ENST00000491183 C18orf63Q68DL7 685 aa16.72■□□□□ 0.27
HMGN1-219ENST00000491183 HSDL2Q6YN16 418 aa16.72■□□□□ 0.27
HMGN1-219ENST00000491183 FGD2Q7Z6J4 655 aa16.72■□□□□ 0.27
HMGN1-219ENST00000491183 MRGPRGQ86SM5 289 aa16.72■□□□□ 0.27
HMGN1-219ENST00000491183 ZCCHC7Q8N3Z6 543 aaKnown RBP16.72■□□□□ 0.27
HMGN1-219ENST00000491183 L3MBTL4Q8NA19 623 aa16.72■□□□□ 0.27
HMGN1-219ENST00000491183 OR14A16Q8NHC5 309 aa16.72■□□□□ 0.27
HMGN1-219ENST00000491183 C16orf52Q8NHV5 167 aa16.72■□□□□ 0.27
HMGN1-219ENST00000491183 UHMK1Q8TAS1 419 aaKnown RBP16.72■□□□□ 0.27
HMGN1-219ENST00000491183 SLC2A12Q8TD20 617 aa16.72■□□□□ 0.27
HMGN1-219ENST00000491183 MAGED4Q96JG8 741 aa16.72■□□□□ 0.27
HMGN1-219ENST00000491183 PAFAH2Q99487 392 aa16.72■□□□□ 0.27
HMGN1-219ENST00000491183 OR8D2Q9GZM6 311 aa16.72■□□□□ 0.27
HMGN1-219ENST00000491183 TSPYL1Q9H0U9 437 aa16.72■□□□□ 0.27
HMGN1-219ENST00000491183 ATG4BQ9Y4P1 393 aa16.72■□□□□ 0.27
HMGN1-219ENST00000491183 TNPO3Q9Y5L0 923 aaKnown RBP16.72■□□□□ 0.27
HMGN1-219ENST00000491183 SPACA6W5XKT8 324 aa16.72■□□□□ 0.27
HMGN1-219ENST00000491183 EML6Q6ZMW3 1958 aa16.71■□□□□ 0.27
HMGN1-219ENST00000491183 CELSR2Q9HCU4 2923 aa16.71■□□□□ 0.27
HMGN1-219ENST00000491183 WASHC1A8K0Z3 465 aa16.71■□□□□ 0.27
HMGN1-219ENST00000491183 PRSS44E7EML9 344 aa16.71■□□□□ 0.27
HMGN1-219ENST00000491183 POC1B-GALNT4F8VUJ3 575 aa16.71■□□□□ 0.27
HMGN1-219ENST00000491183 KLRC4-KLRK1H3BQV0 150 aa16.71■□□□□ 0.27
HMGN1-219ENST00000491183 WWP2O00308 870 aa16.71■□□□□ 0.27
HMGN1-219ENST00000491183 OR7A17O14581 309 aa16.71■□□□□ 0.27
HMGN1-219ENST00000491183 ZNF354AO60765 605 aaPredicted RBP16.71■□□□□ 0.27
HMGN1-219ENST00000491183 PRKRAO75569 313 aaKnown RBP16.71■□□□□ 0.27
HMGN1-219ENST00000491183 OR6B1O95007 311 aa16.71■□□□□ 0.27
HMGN1-219ENST00000491183 CTAGE8P0CG41 777 aa16.71■□□□□ 0.27
HMGN1-219ENST00000491183 PTX3P26022 381 aaPredicted RBP16.71■□□□□ 0.27
HMGN1-219ENST00000491183 BSGP35613 385 aa16.71■□□□□ 0.27
HMGN1-219ENST00000491183 PIK3CGP48736 1102 aa16.71■□□□□ 0.27
HMGN1-219ENST00000491183 NEK2P51955 445 aa16.71■□□□□ 0.27
HMGN1-219ENST00000491183 RAP1GDS1P52306 607 aa16.71■□□□□ 0.27
HMGN1-219ENST00000491183 HK2P52789 917 aa16.71■□□□□ 0.27
HMGN1-219ENST00000491183 CASP6P55212 293 aa16.71■□□□□ 0.27
HMGN1-219ENST00000491183 HNRNPH2P55795 449 aaKnown RBP16.71■□□□□ 0.27
HMGN1-219ENST00000491183 GPR85P60893 370 aa16.71■□□□□ 0.27
HMGN1-219ENST00000491183 ART3Q13508 389 aa16.71■□□□□ 0.27
HMGN1-219ENST00000491183 GLE1Q53GS7 698 aaKnown RBP16.71■□□□□ 0.27
HMGN1-219ENST00000491183 CRYBG3Q68DQ2 2970 aa16.71■□□□□ 0.27
HMGN1-219ENST00000491183 MRM1Q6IN84 353 aaKnown RBP16.71■□□□□ 0.27
HMGN1-219ENST00000491183 METTL2BQ6P1Q9 378 aaKnown RBP16.71■□□□□ 0.27
HMGN1-219ENST00000491183 DGAT2L6Q6ZPD8 337 aa16.71■□□□□ 0.27
HMGN1-219ENST00000491183 GPR180Q86V85 440 aa16.71■□□□□ 0.27
HMGN1-219ENST00000491183 CTAGE4Q8IX94 777 aa16.71■□□□□ 0.27
HMGN1-219ENST00000491183 GHDCQ8N2G8 530 aa16.71■□□□□ 0.27
HMGN1-219ENST00000491183 PTGR2Q8N8N7 351 aaPredicted RBP16.71■□□□□ 0.27
HMGN1-219ENST00000491183 POGLUT1Q8NBL1 392 aa16.71■□□□□ 0.27
HMGN1-219ENST00000491183 MNS1Q8NEH6 495 aa16.71■□□□□ 0.27
HMGN1-219ENST00000491183 WDR20Q8TBZ3 569 aa16.71■□□□□ 0.27
HMGN1-219ENST00000491183 ZNF721Q8TF20 911 aa16.71■□□□□ 0.27
HMGN1-219ENST00000491183 DCAKDQ8WVC6 231 aa16.71■□□□□ 0.27
HMGN1-219ENST00000491183 CDK15Q96Q40 435 aa16.71■□□□□ 0.27
HMGN1-219ENST00000491183 RASL10BQ96S79 203 aa16.71■□□□□ 0.27
HMGN1-219ENST00000491183 RPF2Q9H7B2 306 aaKnown RBP16.71■□□□□ 0.27
HMGN1-219ENST00000491183 NOL11Q9H8H0 719 aaKnown RBP16.71■□□□□ 0.27
HMGN1-219ENST00000491183 DEPPQ9NTK1 212 aa16.71■□□□□ 0.27
HMGN1-219ENST00000491183 ENTPD4Q9Y227 616 aa16.71■□□□□ 0.27
HMGN1-219ENST00000491183 NCOA6Q14686 2063 aaPredicted RBP16.71■□□□□ 0.27
HMGN1-219ENST00000491183 PCNX1Q96RV3 2341 aa16.7■□□□□ 0.26
HMGN1-219ENST00000491183 PROM1O43490 865 aa16.7■□□□□ 0.26
HMGN1-219ENST00000491183 TMPRSS11DO60235 418 aa16.7■□□□□ 0.26
HMGN1-219ENST00000491183 EEDO75530 441 aaKnown RBP16.7■□□□□ 0.26
HMGN1-219ENST00000491183 RBP1P09455 135 aa16.7■□□□□ 0.26
HMGN1-219ENST00000491183 GRNP28799 593 aaKnown RBP16.7■□□□□ 0.26
HMGN1-219ENST00000491183 PTGER1P34995 402 aa16.7■□□□□ 0.26
HMGN1-219ENST00000491183 SOX3P41225 446 aa16.7■□□□□ 0.26
HMGN1-219ENST00000491183 SERPINB9P50453 376 aa16.7■□□□□ 0.26
HMGN1-219ENST00000491183 ARFIP1P53367 373 aa16.7■□□□□ 0.26
HMGN1-219ENST00000491183 RNF4P78317 190 aa16.7■□□□□ 0.26
HMGN1-219ENST00000491183 TNFRSF17Q02223 184 aa16.7■□□□□ 0.26
HMGN1-219ENST00000491183 CUL3Q13618 768 aa16.7■□□□□ 0.26
HMGN1-219ENST00000491183 MTFR2Q6P444 385 aa16.7■□□□□ 0.26
HMGN1-219ENST00000491183 IL20RBQ6UXL0 311 aa16.7■□□□□ 0.26
HMGN1-219ENST00000491183 SLC34A3Q8N130 599 aa16.7■□□□□ 0.26
HMGN1-219ENST00000491183 ZNF808Q8N4W9 903 aaPredicted RBP16.7■□□□□ 0.26
HMGN1-219ENST00000491183 ZFP62Q8NB50 900 aaPredicted RBP16.7■□□□□ 0.26
HMGN1-219ENST00000491183 OR52B6Q8NGF0 335 aa16.7■□□□□ 0.26
HMGN1-219ENST00000491183 OR8K3Q8NH51 312 aa16.7■□□□□ 0.26
HMGN1-219ENST00000491183 UCN3Q969E3 161 aa16.7■□□□□ 0.26
HMGN1-219ENST00000491183 PPWD1Q96BP3 646 aaKnown RBP16.7■□□□□ 0.26
HMGN1-219ENST00000491183 PHF21BQ96EK2 531 aa16.7■□□□□ 0.26
HMGN1-219ENST00000491183 ZBTB26Q9HCK0 441 aa16.7■□□□□ 0.26
HMGN1-219ENST00000491183 TIMMDC1Q9NPL8 285 aa16.7■□□□□ 0.26
HMGN1-219ENST00000491183 MS4A12Q9NXJ0 267 aa16.7■□□□□ 0.26
HMGN1-219ENST00000491183 PSD3Q9NYI0 1048 aa16.7■□□□□ 0.26
HMGN1-219ENST00000491183 ERVK-11Q9UQG0 969 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms